Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19750 and CA264_19755 are separated by 262 nucleotides CA264_19755 and CA264_19760 are separated by 119 nucleotides CA264_19760 and CA264_19765 are separated by 412 nucleotides
CA264_19750: CA264_19750 - IMP dehydrogenase, at 4,559,242 to 4,560,711
_19750
CA264_19755: CA264_19755 - rhodanese, at 4,560,974 to 4,561,291
_19755
CA264_19760: CA264_19760 - hypothetical protein, at 4,561,411 to 4,562,124
_19760
CA264_19765: CA264_19765 - hypothetical protein, at 4,562,537 to 4,562,944
_19765
Position (kb)
4561
4562
4563 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4560.441 kb on + strand, within CA264_19750 at 4560.442 kb on - strand, within CA264_19750 at 4560.452 kb on - strand, within CA264_19750 at 4560.452 kb on - strand, within CA264_19750 at 4560.597 kb on + strand at 4560.642 kb on - strand at 4560.733 kb on + strand at 4560.733 kb on + strand at 4560.760 kb on + strand at 4560.769 kb on - strand at 4560.831 kb on - strand at 4560.897 kb on - strand at 4560.941 kb on + strand at 4560.953 kb on + strand at 4560.976 kb on - strand at 4560.978 kb on + strand at 4561.313 kb on - strand at 4561.315 kb on - strand at 4561.321 kb on - strand at 4561.339 kb on - strand at 4561.392 kb on - strand at 4561.431 kb on - strand at 4561.541 kb on - strand, within CA264_19760 at 4561.687 kb on + strand, within CA264_19760 at 4561.691 kb on - strand, within CA264_19760 at 4561.750 kb on + strand, within CA264_19760 at 4561.750 kb on + strand, within CA264_19760 at 4561.751 kb on - strand, within CA264_19760 at 4561.751 kb on - strand, within CA264_19760 at 4561.912 kb on + strand, within CA264_19760 at 4562.020 kb on - strand, within CA264_19760 at 4562.128 kb on + strand at 4562.229 kb on + strand at 4562.230 kb on - strand at 4562.273 kb on + strand at 4562.274 kb on + strand at 4562.274 kb on + strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.278 kb on + strand at 4562.278 kb on + strand at 4562.278 kb on + strand at 4562.278 kb on + strand at 4562.281 kb on - strand at 4562.308 kb on + strand at 4562.315 kb on + strand at 4562.316 kb on - strand at 4562.316 kb on - strand at 4562.316 kb on - strand at 4562.487 kb on - strand at 4562.487 kb on - strand at 4562.519 kb on + strand at 4562.519 kb on + strand at 4562.561 kb on + strand at 4562.561 kb on + strand at 4562.562 kb on - strand at 4562.562 kb on - strand at 4562.641 kb on + strand, within CA264_19765 at 4562.642 kb on - strand, within CA264_19765 at 4562.642 kb on - strand, within CA264_19765 at 4562.642 kb on - strand, within CA264_19765 at 4562.649 kb on - strand, within CA264_19765 at 4562.651 kb on - strand, within CA264_19765 at 4562.680 kb on + strand, within CA264_19765 at 4562.758 kb on - strand, within CA264_19765 at 4562.882 kb on + strand, within CA264_19765 at 4562.882 kb on + strand, within CA264_19765 at 4562.907 kb on + strand at 4562.908 kb on - strand at 4562.947 kb on + strand at 4563.087 kb on - strand at 4563.118 kb on - strand at 4563.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,560,441 + CA264_19750 0.82 -0.7 4,560,442 - CA264_19750 0.82 -1.2 4,560,452 - CA264_19750 0.82 +0.5 4,560,452 - CA264_19750 0.82 +1.8 4,560,597 + -1.1 4,560,642 - -0.8 4,560,733 + -0.5 4,560,733 + -0.1 4,560,760 + +0.1 4,560,769 - -0.4 4,560,831 - +0.4 4,560,897 - -0.3 4,560,941 + +0.3 4,560,953 + +1.4 4,560,976 - -0.3 4,560,978 + -0.0 4,561,313 - -0.3 4,561,315 - +0.3 4,561,321 - -0.2 4,561,339 - -0.2 4,561,392 - +0.6 4,561,431 - +0.4 4,561,541 - CA264_19760 0.18 -0.7 4,561,687 + CA264_19760 0.39 -0.7 4,561,691 - CA264_19760 0.39 -1.6 4,561,750 + CA264_19760 0.47 +0.5 4,561,750 + CA264_19760 0.47 -1.2 4,561,751 - CA264_19760 0.48 +0.2 4,561,751 - CA264_19760 0.48 -1.6 4,561,912 + CA264_19760 0.70 -0.1 4,562,020 - CA264_19760 0.85 +0.1 4,562,128 + -0.2 4,562,229 + -0.9 4,562,230 - +0.1 4,562,273 + +0.4 4,562,274 + -0.5 4,562,274 + +0.2 4,562,275 - -0.1 4,562,275 - +1.0 4,562,275 - -0.5 4,562,275 - +0.9 4,562,275 - +0.4 4,562,278 + -0.2 4,562,278 + -0.6 4,562,278 + -0.4 4,562,278 + -0.3 4,562,281 - +0.2 4,562,308 + -0.0 4,562,315 + -0.1 4,562,316 - -0.0 4,562,316 - +0.1 4,562,316 - +0.1 4,562,487 - +1.1 4,562,487 - -3.1 4,562,519 + +0.3 4,562,519 + -0.0 4,562,561 + -1.8 4,562,561 + -0.3 4,562,562 - -0.4 4,562,562 - -0.1 4,562,641 + CA264_19765 0.25 -0.4 4,562,642 - CA264_19765 0.26 -0.1 4,562,642 - CA264_19765 0.26 -0.5 4,562,642 - CA264_19765 0.26 +0.6 4,562,649 - CA264_19765 0.27 -1.8 4,562,651 - CA264_19765 0.28 -0.4 4,562,680 + CA264_19765 0.35 +0.0 4,562,758 - CA264_19765 0.54 +0.4 4,562,882 + CA264_19765 0.85 +1.1 4,562,882 + CA264_19765 0.85 -1.8 4,562,907 + +0.3 4,562,908 - +1.6 4,562,947 + +0.8 4,563,087 - +0.9 4,563,118 - +1.0 4,563,118 - +1.4
Or see this region's nucleotide sequence