Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19680 and CA264_19685 are separated by 3 nucleotides CA264_19685 and CA264_19690 are separated by 247 nucleotides
CA264_19680: CA264_19680 - two-component sensor histidine kinase, at 4,543,558 to 4,544,598
_19680
CA264_19685: CA264_19685 - DNA-binding response regulator, at 4,544,602 to 4,545,291
_19685
CA264_19690: CA264_19690 - ATP-dependent exodnase (exonuclease V) alpha subunit - helicase superfamily I member, at 4,545,539 to 4,546,348
_19690
Position (kb)
4544
4545
4546 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4543.940 kb on - strand, within CA264_19680 at 4544.247 kb on + strand, within CA264_19680 at 4544.248 kb on - strand, within CA264_19680 at 4544.367 kb on + strand, within CA264_19680 at 4544.402 kb on + strand, within CA264_19680 at 4544.403 kb on - strand, within CA264_19680 at 4544.404 kb on + strand, within CA264_19680 at 4544.449 kb on + strand, within CA264_19680 at 4544.580 kb on + strand at 4544.581 kb on - strand at 4544.600 kb on + strand at 4544.601 kb on - strand at 4544.601 kb on - strand at 4544.621 kb on + strand at 4544.884 kb on + strand, within CA264_19685 at 4545.200 kb on + strand, within CA264_19685 at 4545.227 kb on - strand at 4545.259 kb on + strand at 4545.273 kb on - strand at 4545.326 kb on + strand at 4545.359 kb on + strand at 4545.384 kb on + strand at 4545.392 kb on - strand at 4545.421 kb on + strand at 4545.424 kb on + strand at 4545.426 kb on + strand at 4545.426 kb on + strand at 4545.426 kb on + strand at 4545.426 kb on + strand at 4545.427 kb on - strand at 4545.427 kb on - strand at 4545.431 kb on + strand at 4545.477 kb on + strand at 4545.478 kb on - strand at 4545.577 kb on + strand at 4545.578 kb on - strand at 4545.807 kb on - strand, within CA264_19690 at 4545.848 kb on - strand, within CA264_19690 at 4545.852 kb on + strand, within CA264_19690 at 4545.909 kb on - strand, within CA264_19690 at 4545.909 kb on - strand, within CA264_19690 at 4545.957 kb on - strand, within CA264_19690 at 4545.957 kb on - strand, within CA264_19690 at 4545.976 kb on - strand, within CA264_19690 at 4546.008 kb on + strand, within CA264_19690 at 4546.008 kb on + strand, within CA264_19690 at 4546.022 kb on + strand, within CA264_19690 at 4546.023 kb on - strand, within CA264_19690 at 4546.060 kb on + strand, within CA264_19690 at 4546.064 kb on + strand, within CA264_19690 at 4546.064 kb on + strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.065 kb on - strand, within CA264_19690 at 4546.130 kb on + strand, within CA264_19690 at 4546.130 kb on + strand, within CA264_19690 at 4546.181 kb on + strand, within CA264_19690 at 4546.228 kb on + strand, within CA264_19690 at 4546.230 kb on + strand, within CA264_19690 at 4546.231 kb on - strand, within CA264_19690 at 4546.234 kb on + strand, within CA264_19690 at 4546.234 kb on + strand, within CA264_19690 at 4546.235 kb on - strand, within CA264_19690
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,543,940 - CA264_19680 0.37 -2.8 4,544,247 + CA264_19680 0.66 -0.6 4,544,248 - CA264_19680 0.66 -2.8 4,544,367 + CA264_19680 0.78 -2.2 4,544,402 + CA264_19680 0.81 -3.3 4,544,403 - CA264_19680 0.81 -2.8 4,544,404 + CA264_19680 0.81 +0.2 4,544,449 + CA264_19680 0.86 -0.4 4,544,580 + -0.8 4,544,581 - -0.8 4,544,600 + -0.1 4,544,601 - -1.4 4,544,601 - +0.4 4,544,621 + -1.9 4,544,884 + CA264_19685 0.41 -3.1 4,545,200 + CA264_19685 0.87 -1.1 4,545,227 - -2.2 4,545,259 + -4.2 4,545,273 - +0.4 4,545,326 + +0.6 4,545,359 + -0.3 4,545,384 + +0.5 4,545,392 - -0.5 4,545,421 + +0.5 4,545,424 + +0.1 4,545,426 + +0.6 4,545,426 + +0.3 4,545,426 + +0.3 4,545,426 + -0.0 4,545,427 - -0.4 4,545,427 - +0.4 4,545,431 + +0.0 4,545,477 + -0.1 4,545,478 - -0.2 4,545,577 + -0.6 4,545,578 - +1.4 4,545,807 - CA264_19690 0.33 -0.3 4,545,848 - CA264_19690 0.38 -0.6 4,545,852 + CA264_19690 0.39 +0.3 4,545,909 - CA264_19690 0.46 +0.0 4,545,909 - CA264_19690 0.46 +0.1 4,545,957 - CA264_19690 0.52 -0.2 4,545,957 - CA264_19690 0.52 +0.4 4,545,976 - CA264_19690 0.54 +0.5 4,546,008 + CA264_19690 0.58 +0.6 4,546,008 + CA264_19690 0.58 +0.5 4,546,022 + CA264_19690 0.60 -0.0 4,546,023 - CA264_19690 0.60 +0.1 4,546,060 + CA264_19690 0.64 +0.2 4,546,064 + CA264_19690 0.65 +0.7 4,546,064 + CA264_19690 0.65 -0.4 4,546,065 - CA264_19690 0.65 +0.1 4,546,065 - CA264_19690 0.65 +0.3 4,546,065 - CA264_19690 0.65 +0.7 4,546,065 - CA264_19690 0.65 -0.0 4,546,130 + CA264_19690 0.73 +1.2 4,546,130 + CA264_19690 0.73 +0.0 4,546,181 + CA264_19690 0.79 +0.8 4,546,228 + CA264_19690 0.85 +0.2 4,546,230 + CA264_19690 0.85 +1.1 4,546,231 - CA264_19690 0.85 -0.5 4,546,234 + CA264_19690 0.86 -1.2 4,546,234 + CA264_19690 0.86 +0.2 4,546,235 - CA264_19690 0.86 +0.4
Or see this region's nucleotide sequence