Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19670 and CA264_19675 are separated by 93 nucleotides CA264_19675 and CA264_19680 are separated by 185 nucleotides CA264_19680 and CA264_19685 are separated by 3 nucleotides CA264_19685 and CA264_19690 are separated by 247 nucleotides
CA264_19670: CA264_19670 - NADPH:quinone oxidoreductase, at 4,541,588 to 4,542,568
_19670
CA264_19675: CA264_19675 - RNA pseudouridine synthase, at 4,542,662 to 4,543,372
_19675
CA264_19680: CA264_19680 - two-component sensor histidine kinase, at 4,543,558 to 4,544,598
_19680
CA264_19685: CA264_19685 - DNA-binding response regulator, at 4,544,602 to 4,545,291
_19685
CA264_19690: CA264_19690 - ATP-dependent exodnase (exonuclease V) alpha subunit - helicase superfamily I member, at 4,545,539 to 4,546,348
_19690
Position (kb) 4543
4544
4545 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4542.820 kb on + strand, within CA264_19675 at 4542.821 kb on - strand, within CA264_19675 at 4542.847 kb on - strand, within CA264_19675 at 4542.865 kb on - strand, within CA264_19675 at 4542.865 kb on - strand, within CA264_19675 at 4542.872 kb on - strand, within CA264_19675 at 4542.879 kb on - strand, within CA264_19675 at 4542.887 kb on - strand, within CA264_19675 at 4542.985 kb on + strand, within CA264_19675 at 4542.985 kb on + strand, within CA264_19675 at 4542.985 kb on + strand, within CA264_19675 at 4543.107 kb on + strand, within CA264_19675 at 4543.248 kb on - strand, within CA264_19675 at 4543.292 kb on - strand, within CA264_19675 at 4543.323 kb on + strand at 4543.341 kb on - strand at 4543.365 kb on + strand at 4543.365 kb on + strand at 4543.380 kb on + strand at 4543.381 kb on - strand at 4543.387 kb on + strand at 4543.430 kb on + strand at 4543.532 kb on + strand at 4543.560 kb on - strand at 4543.560 kb on - strand at 4543.940 kb on - strand, within CA264_19680 at 4544.247 kb on + strand, within CA264_19680 at 4544.248 kb on - strand, within CA264_19680 at 4544.367 kb on + strand, within CA264_19680 at 4544.402 kb on + strand, within CA264_19680 at 4544.403 kb on - strand, within CA264_19680 at 4544.404 kb on + strand, within CA264_19680 at 4544.449 kb on + strand, within CA264_19680 at 4544.580 kb on + strand at 4544.581 kb on - strand at 4544.600 kb on + strand at 4544.601 kb on - strand at 4544.601 kb on - strand at 4544.621 kb on + strand at 4544.884 kb on + strand, within CA264_19685 at 4545.200 kb on + strand, within CA264_19685 at 4545.227 kb on - strand at 4545.259 kb on + strand at 4545.273 kb on - strand at 4545.326 kb on + strand at 4545.359 kb on + strand at 4545.384 kb on + strand at 4545.392 kb on - strand at 4545.421 kb on + strand at 4545.424 kb on + strand at 4545.426 kb on + strand at 4545.426 kb on + strand at 4545.426 kb on + strand at 4545.426 kb on + strand at 4545.427 kb on - strand at 4545.427 kb on - strand at 4545.431 kb on + strand at 4545.477 kb on + strand at 4545.478 kb on - strand at 4545.577 kb on + strand at 4545.578 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,542,820 + CA264_19675 0.22 +0.4 4,542,821 - CA264_19675 0.22 +1.3 4,542,847 - CA264_19675 0.26 -0.0 4,542,865 - CA264_19675 0.29 -0.2 4,542,865 - CA264_19675 0.29 +0.0 4,542,872 - CA264_19675 0.30 -2.0 4,542,879 - CA264_19675 0.31 +0.0 4,542,887 - CA264_19675 0.32 -0.4 4,542,985 + CA264_19675 0.45 -1.9 4,542,985 + CA264_19675 0.45 +0.5 4,542,985 + CA264_19675 0.45 +0.0 4,543,107 + CA264_19675 0.63 +1.1 4,543,248 - CA264_19675 0.82 +0.0 4,543,292 - CA264_19675 0.89 -0.3 4,543,323 + +0.1 4,543,341 - -1.0 4,543,365 + -0.6 4,543,365 + +0.8 4,543,380 + +0.8 4,543,381 - +0.2 4,543,387 + +0.4 4,543,430 + -0.9 4,543,532 + +0.4 4,543,560 - +0.1 4,543,560 - -0.2 4,543,940 - CA264_19680 0.37 -2.8 4,544,247 + CA264_19680 0.66 -0.6 4,544,248 - CA264_19680 0.66 -2.8 4,544,367 + CA264_19680 0.78 -2.2 4,544,402 + CA264_19680 0.81 -3.3 4,544,403 - CA264_19680 0.81 -2.8 4,544,404 + CA264_19680 0.81 +0.2 4,544,449 + CA264_19680 0.86 -0.4 4,544,580 + -0.8 4,544,581 - -0.8 4,544,600 + -0.1 4,544,601 - -1.4 4,544,601 - +0.4 4,544,621 + -1.9 4,544,884 + CA264_19685 0.41 -3.1 4,545,200 + CA264_19685 0.87 -1.1 4,545,227 - -2.2 4,545,259 + -4.2 4,545,273 - +0.4 4,545,326 + +0.6 4,545,359 + -0.3 4,545,384 + +0.5 4,545,392 - -0.5 4,545,421 + +0.5 4,545,424 + +0.1 4,545,426 + +0.6 4,545,426 + +0.3 4,545,426 + +0.3 4,545,426 + -0.0 4,545,427 - -0.4 4,545,427 - +0.4 4,545,431 + +0.0 4,545,477 + -0.1 4,545,478 - -0.2 4,545,577 + -0.6 4,545,578 - +1.4
Or see this region's nucleotide sequence