Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18920 and CA264_18925 are separated by 10 nucleotides CA264_18925 and CA264_18930 are separated by 315 nucleotides
CA264_18920: CA264_18920 - xenobiotic-transporting ATPase, at 4,392,894 to 4,394,627
_18920
CA264_18925: CA264_18925 - TetR family transcriptional regulator, at 4,394,638 to 4,395,324
_18925
CA264_18930: CA264_18930 - RNA helicase, at 4,395,640 to 4,396,905
_18930
Position (kb)
4394
4395
4396 Strain fitness (log2 ratio)
-1
0
1
2 at 4393.708 kb on + strand, within CA264_18920 at 4393.763 kb on + strand, within CA264_18920 at 4393.763 kb on + strand, within CA264_18920 at 4393.764 kb on - strand, within CA264_18920 at 4393.850 kb on + strand, within CA264_18920 at 4393.859 kb on + strand, within CA264_18920 at 4393.924 kb on + strand, within CA264_18920 at 4393.932 kb on + strand, within CA264_18920 at 4393.933 kb on - strand, within CA264_18920 at 4394.031 kb on - strand, within CA264_18920 at 4394.031 kb on - strand, within CA264_18920 at 4394.033 kb on - strand, within CA264_18920 at 4394.033 kb on - strand, within CA264_18920 at 4394.038 kb on + strand, within CA264_18920 at 4394.038 kb on + strand, within CA264_18920 at 4394.039 kb on - strand, within CA264_18920 at 4394.039 kb on - strand, within CA264_18920 at 4394.091 kb on + strand, within CA264_18920 at 4394.091 kb on + strand, within CA264_18920 at 4394.092 kb on - strand, within CA264_18920 at 4394.110 kb on - strand, within CA264_18920 at 4394.110 kb on - strand, within CA264_18920 at 4394.137 kb on + strand, within CA264_18920 at 4394.137 kb on + strand, within CA264_18920 at 4394.146 kb on + strand, within CA264_18920 at 4394.158 kb on - strand, within CA264_18920 at 4394.272 kb on + strand, within CA264_18920 at 4394.276 kb on - strand, within CA264_18920 at 4394.355 kb on + strand, within CA264_18920 at 4394.381 kb on + strand, within CA264_18920 at 4394.533 kb on + strand at 4394.533 kb on + strand at 4394.534 kb on - strand at 4394.535 kb on + strand at 4394.535 kb on + strand at 4394.535 kb on + strand at 4394.535 kb on + strand at 4394.536 kb on - strand at 4394.539 kb on + strand at 4394.539 kb on + strand at 4394.539 kb on + strand at 4394.539 kb on + strand at 4394.540 kb on - strand at 4394.540 kb on - strand at 4394.540 kb on - strand at 4394.545 kb on + strand at 4394.545 kb on + strand at 4394.546 kb on - strand at 4394.546 kb on - strand at 4394.602 kb on + strand at 4394.603 kb on - strand at 4394.603 kb on - strand at 4394.621 kb on + strand at 4394.621 kb on + strand at 4394.622 kb on - strand at 4394.622 kb on - strand at 4394.627 kb on + strand at 4394.628 kb on - strand at 4394.628 kb on - strand at 4394.788 kb on + strand, within CA264_18925 at 4394.788 kb on + strand, within CA264_18925 at 4394.788 kb on + strand, within CA264_18925 at 4394.865 kb on - strand, within CA264_18925 at 4394.876 kb on + strand, within CA264_18925 at 4394.910 kb on + strand, within CA264_18925 at 4394.910 kb on + strand, within CA264_18925 at 4394.910 kb on + strand, within CA264_18925 at 4394.911 kb on - strand, within CA264_18925 at 4394.915 kb on + strand, within CA264_18925 at 4394.916 kb on - strand, within CA264_18925 at 4394.917 kb on + strand, within CA264_18925 at 4394.918 kb on - strand, within CA264_18925 at 4394.918 kb on - strand, within CA264_18925 at 4395.056 kb on - strand, within CA264_18925 at 4395.108 kb on - strand, within CA264_18925 at 4395.218 kb on - strand, within CA264_18925 at 4395.278 kb on - strand at 4395.282 kb on - strand at 4395.320 kb on - strand at 4395.320 kb on - strand at 4395.320 kb on - strand at 4395.324 kb on + strand at 4395.324 kb on + strand at 4395.325 kb on - strand at 4395.325 kb on - strand at 4395.574 kb on + strand at 4395.574 kb on + strand at 4395.575 kb on - strand at 4395.575 kb on - strand at 4395.580 kb on + strand at 4395.580 kb on + strand at 4395.610 kb on + strand at 4395.610 kb on + strand at 4395.610 kb on + strand at 4395.611 kb on - strand at 4395.614 kb on + strand at 4395.624 kb on + strand at 4395.626 kb on + strand at 4395.627 kb on - strand at 4395.627 kb on - strand at 4395.630 kb on + strand at 4395.630 kb on + strand at 4395.675 kb on - strand at 4395.789 kb on + strand, within CA264_18930 at 4395.789 kb on + strand, within CA264_18930 at 4395.835 kb on - strand, within CA264_18930 at 4395.948 kb on + strand, within CA264_18930 at 4396.069 kb on - strand, within CA264_18930 at 4396.070 kb on + strand, within CA264_18930 at 4396.071 kb on - strand, within CA264_18930 at 4396.135 kb on - strand, within CA264_18930 at 4396.295 kb on + strand, within CA264_18930 at 4396.295 kb on + strand, within CA264_18930 at 4396.296 kb on - strand, within CA264_18930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,393,708 + CA264_18920 0.47 -0.7 4,393,763 + CA264_18920 0.50 +0.0 4,393,763 + CA264_18920 0.50 -1.7 4,393,764 - CA264_18920 0.50 -0.3 4,393,850 + CA264_18920 0.55 -0.1 4,393,859 + CA264_18920 0.56 -0.0 4,393,924 + CA264_18920 0.59 +0.7 4,393,932 + CA264_18920 0.60 -0.1 4,393,933 - CA264_18920 0.60 +0.1 4,394,031 - CA264_18920 0.66 -0.7 4,394,031 - CA264_18920 0.66 -0.8 4,394,033 - CA264_18920 0.66 +1.3 4,394,033 - CA264_18920 0.66 +0.1 4,394,038 + CA264_18920 0.66 -0.3 4,394,038 + CA264_18920 0.66 +0.9 4,394,039 - CA264_18920 0.66 -0.3 4,394,039 - CA264_18920 0.66 +0.9 4,394,091 + CA264_18920 0.69 +0.5 4,394,091 + CA264_18920 0.69 +0.5 4,394,092 - CA264_18920 0.69 -0.9 4,394,110 - CA264_18920 0.70 -0.0 4,394,110 - CA264_18920 0.70 -0.0 4,394,137 + CA264_18920 0.72 -0.9 4,394,137 + CA264_18920 0.72 +1.3 4,394,146 + CA264_18920 0.72 +0.4 4,394,158 - CA264_18920 0.73 -0.6 4,394,272 + CA264_18920 0.79 -0.5 4,394,276 - CA264_18920 0.80 -0.4 4,394,355 + CA264_18920 0.84 -0.0 4,394,381 + CA264_18920 0.86 +1.0 4,394,533 + +0.6 4,394,533 + +0.2 4,394,534 - -1.2 4,394,535 + -0.6 4,394,535 + -0.2 4,394,535 + -0.7 4,394,535 + +1.0 4,394,536 - +0.3 4,394,539 + -1.0 4,394,539 + -0.4 4,394,539 + +0.1 4,394,539 + -0.5 4,394,540 - -0.0 4,394,540 - -0.5 4,394,540 - -0.6 4,394,545 + +0.4 4,394,545 + -0.1 4,394,546 - -1.6 4,394,546 - -0.0 4,394,602 + +0.7 4,394,603 - -1.4 4,394,603 - +1.3 4,394,621 + +0.3 4,394,621 + -0.6 4,394,622 - +0.2 4,394,622 - +0.2 4,394,627 + -1.5 4,394,628 - -1.6 4,394,628 - +0.4 4,394,788 + CA264_18925 0.22 +0.3 4,394,788 + CA264_18925 0.22 -0.7 4,394,788 + CA264_18925 0.22 +0.2 4,394,865 - CA264_18925 0.33 -0.1 4,394,876 + CA264_18925 0.35 +0.2 4,394,910 + CA264_18925 0.40 +0.0 4,394,910 + CA264_18925 0.40 -1.1 4,394,910 + CA264_18925 0.40 -1.1 4,394,911 - CA264_18925 0.40 -0.1 4,394,915 + CA264_18925 0.40 +0.4 4,394,916 - CA264_18925 0.40 -0.7 4,394,917 + CA264_18925 0.41 +0.8 4,394,918 - CA264_18925 0.41 +0.2 4,394,918 - CA264_18925 0.41 -0.0 4,395,056 - CA264_18925 0.61 +0.6 4,395,108 - CA264_18925 0.68 -0.3 4,395,218 - CA264_18925 0.84 -0.1 4,395,278 - +0.3 4,395,282 - -0.8 4,395,320 - +1.7 4,395,320 - -0.0 4,395,320 - -0.3 4,395,324 + -0.0 4,395,324 + -0.4 4,395,325 - +0.9 4,395,325 - -1.0 4,395,574 + +0.1 4,395,574 + -0.3 4,395,575 - -0.4 4,395,575 - -0.4 4,395,580 + +0.1 4,395,580 + -0.1 4,395,610 + -0.0 4,395,610 + -1.1 4,395,610 + -0.3 4,395,611 - -0.7 4,395,614 + +0.2 4,395,624 + +0.3 4,395,626 + +0.0 4,395,627 - -0.7 4,395,627 - +0.4 4,395,630 + +1.2 4,395,630 + -0.9 4,395,675 - -0.1 4,395,789 + CA264_18930 0.12 -0.5 4,395,789 + CA264_18930 0.12 +0.1 4,395,835 - CA264_18930 0.15 -1.1 4,395,948 + CA264_18930 0.24 +0.2 4,396,069 - CA264_18930 0.34 -0.7 4,396,070 + CA264_18930 0.34 +0.1 4,396,071 - CA264_18930 0.34 -0.2 4,396,135 - CA264_18930 0.39 -0.4 4,396,295 + CA264_18930 0.52 -0.2 4,396,295 + CA264_18930 0.52 -0.4 4,396,296 - CA264_18930 0.52 +1.9
Or see this region's nucleotide sequence