Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18665 and CA264_18670 are separated by 107 nucleotides CA264_18670 and CA264_18675 are separated by 122 nucleotides CA264_18675 and CA264_18680 are separated by 128 nucleotides
CA264_18665: CA264_18665 - prenyltransferase, at 4,337,779 to 4,338,621
_18665
CA264_18670: CA264_18670 - cold-shock protein, at 4,338,729 to 4,338,923
_18670
CA264_18675: CA264_18675 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, at 4,339,046 to 4,339,543
_18675
CA264_18680: CA264_18680 - Fe-S assembly protein IscX, at 4,339,672 to 4,339,908
_18680
Position (kb) 4338
4339 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4337.733 kb on - strand at 4337.780 kb on + strand at 4337.817 kb on + strand at 4337.921 kb on + strand, within CA264_18665 at 4337.922 kb on - strand, within CA264_18665 at 4337.922 kb on - strand, within CA264_18665 at 4338.037 kb on - strand, within CA264_18665 at 4338.112 kb on + strand, within CA264_18665 at 4338.113 kb on - strand, within CA264_18665 at 4338.127 kb on + strand, within CA264_18665 at 4338.145 kb on - strand, within CA264_18665 at 4338.214 kb on + strand, within CA264_18665 at 4338.376 kb on + strand, within CA264_18665 at 4338.435 kb on - strand, within CA264_18665 at 4338.448 kb on - strand, within CA264_18665 at 4338.452 kb on + strand, within CA264_18665 at 4338.598 kb on + strand at 4338.599 kb on - strand at 4338.612 kb on + strand at 4338.613 kb on - strand at 4338.614 kb on + strand at 4338.648 kb on + strand at 4338.648 kb on + strand at 4338.721 kb on - strand at 4338.721 kb on - strand at 4338.747 kb on + strand at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.775 kb on - strand, within CA264_18670 at 4338.887 kb on + strand, within CA264_18670 at 4338.928 kb on - strand at 4338.983 kb on + strand at 4338.983 kb on + strand at 4339.071 kb on - strand at 4339.224 kb on + strand, within CA264_18675 at 4339.224 kb on + strand, within CA264_18675 at 4339.224 kb on + strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.230 kb on - strand, within CA264_18675 at 4339.244 kb on + strand, within CA264_18675 at 4339.258 kb on - strand, within CA264_18675 at 4339.258 kb on - strand, within CA264_18675 at 4339.264 kb on - strand, within CA264_18675 at 4339.313 kb on + strand, within CA264_18675 at 4339.481 kb on + strand, within CA264_18675 at 4339.569 kb on + strand at 4339.574 kb on + strand at 4339.575 kb on - strand at 4339.634 kb on - strand at 4339.908 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,337,733 - +0.5 4,337,780 + -1.2 4,337,817 + -0.2 4,337,921 + CA264_18665 0.17 -1.0 4,337,922 - CA264_18665 0.17 +0.7 4,337,922 - CA264_18665 0.17 -0.3 4,338,037 - CA264_18665 0.31 +0.2 4,338,112 + CA264_18665 0.40 -0.2 4,338,113 - CA264_18665 0.40 -1.1 4,338,127 + CA264_18665 0.41 -0.4 4,338,145 - CA264_18665 0.43 +0.2 4,338,214 + CA264_18665 0.52 -1.0 4,338,376 + CA264_18665 0.71 +1.3 4,338,435 - CA264_18665 0.78 +0.1 4,338,448 - CA264_18665 0.79 -0.1 4,338,452 + CA264_18665 0.80 -0.9 4,338,598 + -0.4 4,338,599 - +0.4 4,338,612 + -0.5 4,338,613 - -0.2 4,338,614 + +0.3 4,338,648 + -0.4 4,338,648 + -0.5 4,338,721 - -0.5 4,338,721 - -0.7 4,338,747 + -0.5 4,338,774 + CA264_18670 0.23 -0.7 4,338,774 + CA264_18670 0.23 -0.4 4,338,774 + CA264_18670 0.23 -1.6 4,338,774 + CA264_18670 0.23 -0.5 4,338,774 + CA264_18670 0.23 -1.0 4,338,775 - CA264_18670 0.24 -2.5 4,338,887 + CA264_18670 0.81 -0.3 4,338,928 - +0.2 4,338,983 + -1.4 4,338,983 + -0.1 4,339,071 - +0.2 4,339,224 + CA264_18675 0.36 -0.7 4,339,224 + CA264_18675 0.36 +0.3 4,339,224 + CA264_18675 0.36 +0.6 4,339,225 - CA264_18675 0.36 -0.9 4,339,225 - CA264_18675 0.36 +0.4 4,339,225 - CA264_18675 0.36 -0.3 4,339,225 - CA264_18675 0.36 -0.2 4,339,230 - CA264_18675 0.37 -0.2 4,339,244 + CA264_18675 0.40 -2.0 4,339,258 - CA264_18675 0.43 -0.2 4,339,258 - CA264_18675 0.43 +1.8 4,339,264 - CA264_18675 0.44 -0.9 4,339,313 + CA264_18675 0.54 -0.5 4,339,481 + CA264_18675 0.87 -0.2 4,339,569 + +0.3 4,339,574 + -0.5 4,339,575 - -0.1 4,339,634 - -0.2 4,339,908 + -0.3
Or see this region's nucleotide sequence