Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17875 and CA264_17880 are separated by 120 nucleotides CA264_17880 and CA264_17885 are separated by 251 nucleotides CA264_17885 and CA264_17890 are separated by 68 nucleotides
CA264_17875: CA264_17875 - amino acid dehydrogenase, at 4,156,201 to 4,157,475
_17875
CA264_17880: CA264_17880 - phosphatidylserine decarboxylase, at 4,157,596 to 4,158,279
_17880
CA264_17885: CA264_17885 - GAF domain-containing protein, at 4,158,531 to 4,159,013
_17885
CA264_17890: CA264_17890 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase, at 4,159,082 to 4,160,119
_17890
Position (kb)
4157
4158
4159 Strain fitness (log2 ratio)
-1
0
1 at 4156.627 kb on - strand, within CA264_17875 at 4156.650 kb on - strand, within CA264_17875 at 4157.094 kb on - strand, within CA264_17875 at 4157.192 kb on - strand, within CA264_17875 at 4157.275 kb on + strand, within CA264_17875 at 4157.474 kb on - strand at 4157.526 kb on + strand at 4157.538 kb on + strand at 4157.567 kb on + strand at 4158.277 kb on + strand at 4158.293 kb on - strand at 4158.293 kb on - strand at 4158.294 kb on + strand at 4158.294 kb on + strand at 4158.295 kb on - strand at 4158.300 kb on - strand at 4158.303 kb on + strand at 4158.303 kb on + strand at 4158.303 kb on + strand at 4158.304 kb on - strand at 4158.402 kb on - strand at 4158.499 kb on + strand at 4158.517 kb on - strand at 4158.520 kb on + strand at 4158.615 kb on + strand, within CA264_17885 at 4158.633 kb on + strand, within CA264_17885 at 4158.746 kb on + strand, within CA264_17885 at 4158.965 kb on - strand at 4158.993 kb on + strand at 4158.993 kb on + strand at 4158.994 kb on - strand at 4159.018 kb on + strand at 4159.019 kb on - strand at 4159.021 kb on + strand at 4159.051 kb on + strand at 4159.056 kb on - strand at 4159.056 kb on - strand at 4159.090 kb on + strand at 4159.091 kb on - strand at 4159.091 kb on - strand at 4159.093 kb on + strand at 4159.093 kb on + strand at 4159.094 kb on - strand at 4159.094 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,156,627 - CA264_17875 0.33 +0.7 4,156,650 - CA264_17875 0.35 -0.4 4,157,094 - CA264_17875 0.70 +0.4 4,157,192 - CA264_17875 0.78 -0.2 4,157,275 + CA264_17875 0.84 -0.7 4,157,474 - +0.4 4,157,526 + +0.1 4,157,538 + -0.1 4,157,567 + +1.2 4,158,277 + +0.7 4,158,293 - -0.8 4,158,293 - -0.1 4,158,294 + -0.9 4,158,294 + -0.0 4,158,295 - -0.5 4,158,300 - -0.1 4,158,303 + +0.2 4,158,303 + +0.0 4,158,303 + +0.1 4,158,304 - -0.3 4,158,402 - -0.8 4,158,499 + -0.3 4,158,517 - +0.2 4,158,520 + +0.2 4,158,615 + CA264_17885 0.17 -0.1 4,158,633 + CA264_17885 0.21 -0.8 4,158,746 + CA264_17885 0.45 -0.9 4,158,965 - -0.1 4,158,993 + +1.4 4,158,993 + -0.4 4,158,994 - -0.7 4,159,018 + -0.3 4,159,019 - +0.4 4,159,021 + -0.3 4,159,051 + -0.1 4,159,056 - -0.3 4,159,056 - -1.2 4,159,090 + +0.7 4,159,091 - +0.4 4,159,091 - +0.1 4,159,093 + -0.3 4,159,093 + +0.3 4,159,094 - +0.3 4,159,094 - -0.5
Or see this region's nucleotide sequence