Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17775 and CA264_17780 are separated by 15 nucleotides CA264_17780 and CA264_17785 are separated by 26 nucleotides CA264_17785 and CA264_17790 are separated by 41 nucleotides CA264_17790 and CA264_17795 overlap by 1 nucleotides CA264_17795 and CA264_17800 are separated by 185 nucleotides CA264_17800 and CA264_17805 are separated by 137 nucleotides
CA264_17775: CA264_17775 - isocitrate dehydrogenase, at 4,135,204 to 4,136,202
_17775
CA264_17780: CA264_17780 - hypothetical protein, at 4,136,218 to 4,136,754
_17780
CA264_17785: CA264_17785 - preprotein translocase subunit YajC, at 4,136,781 to 4,137,086
_17785
CA264_17790: CA264_17790 - hypothetical protein, at 4,137,128 to 4,138,066
_17790
CA264_17795: CA264_17795 - dephospho-CoA kinase, at 4,138,066 to 4,138,662
_17795
CA264_17800: CA264_17800 - tRNA-Val, at 4,138,848 to 4,138,922
_17800
CA264_17805: CA264_17805 - tRNA-Val, at 4,139,060 to 4,139,137
_17805
Position (kb)
4137
4138
4139 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4136.204 kb on + strand at 4136.210 kb on - strand at 4136.215 kb on - strand at 4136.215 kb on - strand at 4136.215 kb on - strand at 4136.255 kb on + strand at 4136.429 kb on - strand, within CA264_17780 at 4136.429 kb on - strand, within CA264_17780 at 4136.462 kb on + strand, within CA264_17780 at 4136.637 kb on + strand, within CA264_17780 at 4136.644 kb on - strand, within CA264_17780 at 4136.682 kb on - strand, within CA264_17780 at 4136.773 kb on + strand at 4136.786 kb on + strand at 4136.860 kb on - strand, within CA264_17785 at 4136.951 kb on - strand, within CA264_17785 at 4136.951 kb on - strand, within CA264_17785 at 4136.996 kb on + strand, within CA264_17785 at 4136.997 kb on - strand, within CA264_17785 at 4136.997 kb on - strand, within CA264_17785 at 4137.079 kb on + strand at 4137.084 kb on + strand at 4137.121 kb on - strand at 4137.169 kb on - strand at 4137.729 kb on - strand, within CA264_17790 at 4137.935 kb on - strand, within CA264_17790 at 4137.960 kb on - strand, within CA264_17790 at 4137.960 kb on - strand, within CA264_17790 at 4138.023 kb on + strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.066 kb on - strand at 4138.077 kb on - strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.741 kb on - strand at 4138.760 kb on + strand at 4138.760 kb on + strand at 4138.762 kb on + strand at 4138.762 kb on + strand at 4138.763 kb on - strand at 4138.763 kb on - strand at 4138.886 kb on + strand, within CA264_17800 at 4138.887 kb on - strand, within CA264_17800 at 4138.915 kb on - strand at 4138.915 kb on - strand at 4139.025 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,136,204 + +0.0 4,136,210 - -0.3 4,136,215 - +0.3 4,136,215 - -0.7 4,136,215 - -1.7 4,136,255 + +1.3 4,136,429 - CA264_17780 0.39 -2.0 4,136,429 - CA264_17780 0.39 -1.1 4,136,462 + CA264_17780 0.45 +1.1 4,136,637 + CA264_17780 0.78 -0.4 4,136,644 - CA264_17780 0.79 -0.7 4,136,682 - CA264_17780 0.86 -1.1 4,136,773 + +0.4 4,136,786 + -1.0 4,136,860 - CA264_17785 0.26 -1.4 4,136,951 - CA264_17785 0.56 -1.8 4,136,951 - CA264_17785 0.56 +0.5 4,136,996 + CA264_17785 0.70 -1.7 4,136,997 - CA264_17785 0.71 -1.5 4,136,997 - CA264_17785 0.71 +0.5 4,137,079 + -0.4 4,137,084 + -1.8 4,137,121 - -0.5 4,137,169 - +0.5 4,137,729 - CA264_17790 0.64 -0.4 4,137,935 - CA264_17790 0.86 -0.4 4,137,960 - CA264_17790 0.89 -0.2 4,137,960 - CA264_17790 0.89 -0.4 4,138,023 + +0.2 4,138,024 - +0.8 4,138,024 - +0.2 4,138,024 - -0.0 4,138,024 - +0.1 4,138,066 - -1.5 4,138,077 - -0.3 4,138,732 + -0.4 4,138,732 + -0.4 4,138,732 + +0.2 4,138,732 + +0.3 4,138,741 - +1.3 4,138,760 + +0.1 4,138,760 + -0.5 4,138,762 + -0.2 4,138,762 + -0.2 4,138,763 - -0.1 4,138,763 - -1.5 4,138,886 + CA264_17800 0.51 +0.3 4,138,887 - CA264_17800 0.52 -0.2 4,138,915 - +2.5 4,138,915 - +0.1 4,139,025 - +0.2
Or see this region's nucleotide sequence