Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17645 and CA264_17650 overlap by 18 nucleotides CA264_17650 and CA264_17655 overlap by 11 nucleotides CA264_17655 and CA264_17660 overlap by 4 nucleotides
CA264_17645: CA264_17645 - AraC family transcriptional regulator, at 4,108,346 to 4,109,272
_17645
CA264_17650: CA264_17650 - geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase, at 4,109,255 to 4,110,022
_17650
CA264_17655: CA264_17655 - hypothetical protein, at 4,110,012 to 4,110,605
_17655
CA264_17660: CA264_17660 - hypothetical protein, at 4,110,602 to 4,110,982
_17660
Position (kb)
4109
4110
4111 Strain fitness (log2 ratio)
-2
-1
0
1 at 4108.317 kb on + strand at 4109.270 kb on + strand at 4109.270 kb on + strand at 4109.270 kb on + strand at 4109.271 kb on - strand at 4109.333 kb on + strand, within CA264_17650 at 4109.334 kb on - strand, within CA264_17650 at 4109.508 kb on + strand, within CA264_17650 at 4109.509 kb on - strand, within CA264_17650 at 4109.555 kb on - strand, within CA264_17650 at 4109.566 kb on + strand, within CA264_17650 at 4109.576 kb on - strand, within CA264_17650 at 4109.595 kb on + strand, within CA264_17650 at 4109.687 kb on - strand, within CA264_17650 at 4109.765 kb on + strand, within CA264_17650 at 4109.766 kb on - strand, within CA264_17650 at 4109.819 kb on + strand, within CA264_17650 at 4109.958 kb on - strand at 4109.981 kb on + strand at 4109.982 kb on - strand at 4109.982 kb on - strand at 4109.983 kb on + strand at 4109.983 kb on + strand at 4109.984 kb on - strand at 4110.013 kb on + strand at 4110.038 kb on + strand at 4110.039 kb on - strand at 4110.040 kb on + strand at 4110.054 kb on + strand at 4110.055 kb on - strand at 4110.072 kb on + strand, within CA264_17655 at 4110.090 kb on - strand, within CA264_17655 at 4110.114 kb on + strand, within CA264_17655 at 4110.115 kb on - strand, within CA264_17655 at 4110.142 kb on + strand, within CA264_17655 at 4110.142 kb on + strand, within CA264_17655 at 4110.150 kb on + strand, within CA264_17655 at 4110.151 kb on - strand, within CA264_17655 at 4110.200 kb on + strand, within CA264_17655 at 4110.200 kb on + strand, within CA264_17655 at 4110.304 kb on + strand, within CA264_17655 at 4110.605 kb on + strand at 4110.605 kb on + strand at 4110.606 kb on - strand at 4110.670 kb on + strand, within CA264_17660 at 4110.671 kb on - strand, within CA264_17660 at 4110.714 kb on - strand, within CA264_17660 at 4110.731 kb on + strand, within CA264_17660 at 4110.765 kb on - strand, within CA264_17660 at 4110.765 kb on - strand, within CA264_17660 at 4110.854 kb on + strand, within CA264_17660 at 4110.882 kb on - strand, within CA264_17660 at 4110.894 kb on - strand, within CA264_17660 at 4110.899 kb on - strand, within CA264_17660 at 4110.899 kb on - strand, within CA264_17660 at 4110.899 kb on - strand, within CA264_17660 at 4110.902 kb on + strand, within CA264_17660 at 4110.902 kb on + strand, within CA264_17660 at 4110.903 kb on - strand, within CA264_17660 at 4110.903 kb on - strand, within CA264_17660 at 4110.903 kb on - strand, within CA264_17660 at 4110.918 kb on + strand, within CA264_17660 at 4110.982 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,108,317 + +0.1 4,109,270 + -0.0 4,109,270 + -0.2 4,109,270 + -0.3 4,109,271 - -0.5 4,109,333 + CA264_17650 0.10 -0.1 4,109,334 - CA264_17650 0.10 -0.7 4,109,508 + CA264_17650 0.33 +0.7 4,109,509 - CA264_17650 0.33 -2.0 4,109,555 - CA264_17650 0.39 -0.9 4,109,566 + CA264_17650 0.40 -0.1 4,109,576 - CA264_17650 0.42 -1.6 4,109,595 + CA264_17650 0.44 -0.6 4,109,687 - CA264_17650 0.56 -1.7 4,109,765 + CA264_17650 0.66 -0.6 4,109,766 - CA264_17650 0.67 -0.6 4,109,819 + CA264_17650 0.73 +1.0 4,109,958 - -0.2 4,109,981 + +0.9 4,109,982 - +0.3 4,109,982 - -0.1 4,109,983 + +0.8 4,109,983 + +0.3 4,109,984 - +0.3 4,110,013 + -1.5 4,110,038 + -0.6 4,110,039 - -0.7 4,110,040 + -0.4 4,110,054 + +0.6 4,110,055 - +0.2 4,110,072 + CA264_17655 0.10 -0.3 4,110,090 - CA264_17655 0.13 -0.2 4,110,114 + CA264_17655 0.17 -0.3 4,110,115 - CA264_17655 0.17 +0.3 4,110,142 + CA264_17655 0.22 -0.8 4,110,142 + CA264_17655 0.22 -0.2 4,110,150 + CA264_17655 0.23 +0.1 4,110,151 - CA264_17655 0.23 -0.9 4,110,200 + CA264_17655 0.32 -0.8 4,110,200 + CA264_17655 0.32 -0.7 4,110,304 + CA264_17655 0.49 -1.2 4,110,605 + +0.1 4,110,605 + -0.0 4,110,606 - -0.0 4,110,670 + CA264_17660 0.18 +0.4 4,110,671 - CA264_17660 0.18 -0.1 4,110,714 - CA264_17660 0.29 -0.6 4,110,731 + CA264_17660 0.34 +0.5 4,110,765 - CA264_17660 0.43 -0.2 4,110,765 - CA264_17660 0.43 +0.2 4,110,854 + CA264_17660 0.66 -0.5 4,110,882 - CA264_17660 0.73 -0.4 4,110,894 - CA264_17660 0.77 +0.6 4,110,899 - CA264_17660 0.78 +0.5 4,110,899 - CA264_17660 0.78 +0.4 4,110,899 - CA264_17660 0.78 +0.1 4,110,902 + CA264_17660 0.79 +0.1 4,110,902 + CA264_17660 0.79 -0.4 4,110,903 - CA264_17660 0.79 -0.1 4,110,903 - CA264_17660 0.79 -0.7 4,110,903 - CA264_17660 0.79 +0.1 4,110,918 + CA264_17660 0.83 -0.2 4,110,982 + -0.1
Or see this region's nucleotide sequence