Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17640 and CA264_17645 are separated by 159 nucleotides CA264_17645 and CA264_17650 overlap by 18 nucleotides CA264_17650 and CA264_17655 overlap by 11 nucleotides
CA264_17640: CA264_17640 - acyl-CoA dehydrogenase, at 4,107,047 to 4,108,186
_17640
CA264_17645: CA264_17645 - AraC family transcriptional regulator, at 4,108,346 to 4,109,272
_17645
CA264_17650: CA264_17650 - geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase, at 4,109,255 to 4,110,022
_17650
CA264_17655: CA264_17655 - hypothetical protein, at 4,110,012 to 4,110,605
_17655
Position (kb)
4108
4109
4110 Strain fitness (log2 ratio)
-2
-1
0
1 at 4107.374 kb on + strand, within CA264_17640 at 4107.374 kb on + strand, within CA264_17640 at 4107.375 kb on - strand, within CA264_17640 at 4107.375 kb on - strand, within CA264_17640 at 4107.550 kb on - strand, within CA264_17640 at 4107.550 kb on - strand, within CA264_17640 at 4107.563 kb on + strand, within CA264_17640 at 4107.716 kb on - strand, within CA264_17640 at 4107.803 kb on - strand, within CA264_17640 at 4107.864 kb on + strand, within CA264_17640 at 4107.896 kb on - strand, within CA264_17640 at 4108.057 kb on - strand, within CA264_17640 at 4108.086 kb on - strand at 4108.226 kb on + strand at 4108.317 kb on + strand at 4109.270 kb on + strand at 4109.270 kb on + strand at 4109.270 kb on + strand at 4109.271 kb on - strand at 4109.333 kb on + strand, within CA264_17650 at 4109.334 kb on - strand, within CA264_17650 at 4109.508 kb on + strand, within CA264_17650 at 4109.509 kb on - strand, within CA264_17650 at 4109.555 kb on - strand, within CA264_17650 at 4109.566 kb on + strand, within CA264_17650 at 4109.576 kb on - strand, within CA264_17650 at 4109.595 kb on + strand, within CA264_17650 at 4109.687 kb on - strand, within CA264_17650 at 4109.765 kb on + strand, within CA264_17650 at 4109.766 kb on - strand, within CA264_17650 at 4109.819 kb on + strand, within CA264_17650 at 4109.958 kb on - strand at 4109.981 kb on + strand at 4109.982 kb on - strand at 4109.982 kb on - strand at 4109.983 kb on + strand at 4109.983 kb on + strand at 4109.984 kb on - strand at 4110.013 kb on + strand at 4110.038 kb on + strand at 4110.039 kb on - strand at 4110.040 kb on + strand at 4110.054 kb on + strand at 4110.055 kb on - strand at 4110.072 kb on + strand, within CA264_17655 at 4110.090 kb on - strand, within CA264_17655 at 4110.114 kb on + strand, within CA264_17655 at 4110.115 kb on - strand, within CA264_17655 at 4110.142 kb on + strand, within CA264_17655 at 4110.142 kb on + strand, within CA264_17655 at 4110.150 kb on + strand, within CA264_17655 at 4110.151 kb on - strand, within CA264_17655 at 4110.200 kb on + strand, within CA264_17655 at 4110.200 kb on + strand, within CA264_17655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,107,374 + CA264_17640 0.29 +0.2 4,107,374 + CA264_17640 0.29 +0.2 4,107,375 - CA264_17640 0.29 +0.8 4,107,375 - CA264_17640 0.29 +0.1 4,107,550 - CA264_17640 0.44 -0.7 4,107,550 - CA264_17640 0.44 -0.1 4,107,563 + CA264_17640 0.45 +0.8 4,107,716 - CA264_17640 0.59 -0.1 4,107,803 - CA264_17640 0.66 -0.7 4,107,864 + CA264_17640 0.72 +0.5 4,107,896 - CA264_17640 0.74 +1.5 4,108,057 - CA264_17640 0.89 +0.4 4,108,086 - -0.1 4,108,226 + +0.9 4,108,317 + +0.1 4,109,270 + -0.0 4,109,270 + -0.2 4,109,270 + -0.3 4,109,271 - -0.5 4,109,333 + CA264_17650 0.10 -0.1 4,109,334 - CA264_17650 0.10 -0.7 4,109,508 + CA264_17650 0.33 +0.7 4,109,509 - CA264_17650 0.33 -2.0 4,109,555 - CA264_17650 0.39 -0.9 4,109,566 + CA264_17650 0.40 -0.1 4,109,576 - CA264_17650 0.42 -1.6 4,109,595 + CA264_17650 0.44 -0.6 4,109,687 - CA264_17650 0.56 -1.7 4,109,765 + CA264_17650 0.66 -0.6 4,109,766 - CA264_17650 0.67 -0.6 4,109,819 + CA264_17650 0.73 +1.0 4,109,958 - -0.2 4,109,981 + +0.9 4,109,982 - +0.3 4,109,982 - -0.1 4,109,983 + +0.8 4,109,983 + +0.3 4,109,984 - +0.3 4,110,013 + -1.5 4,110,038 + -0.6 4,110,039 - -0.7 4,110,040 + -0.4 4,110,054 + +0.6 4,110,055 - +0.2 4,110,072 + CA264_17655 0.10 -0.3 4,110,090 - CA264_17655 0.13 -0.2 4,110,114 + CA264_17655 0.17 -0.3 4,110,115 - CA264_17655 0.17 +0.3 4,110,142 + CA264_17655 0.22 -0.8 4,110,142 + CA264_17655 0.22 -0.2 4,110,150 + CA264_17655 0.23 +0.1 4,110,151 - CA264_17655 0.23 -0.9 4,110,200 + CA264_17655 0.32 -0.8 4,110,200 + CA264_17655 0.32 -0.7
Or see this region's nucleotide sequence