Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16350 and CA264_16355 are separated by 71 nucleotides CA264_16355 and CA264_16360 are separated by 21 nucleotides
CA264_16350: CA264_16350 - excinuclease ABC subunit C, at 3,804,616 to 3,806,436
_16350
CA264_16355: CA264_16355 - gliding motility protein GldN, at 3,806,508 to 3,807,368
_16355
CA264_16360: CA264_16360 - gliding motility protein GldM, at 3,807,390 to 3,808,982
_16360
Position (kb)
3806
3807
3808 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3805.514 kb on + strand, within CA264_16350 at 3805.515 kb on - strand, within CA264_16350 at 3805.578 kb on + strand, within CA264_16350 at 3805.639 kb on - strand, within CA264_16350 at 3805.679 kb on - strand, within CA264_16350 at 3805.682 kb on + strand, within CA264_16350 at 3805.724 kb on + strand, within CA264_16350 at 3805.849 kb on - strand, within CA264_16350 at 3805.876 kb on - strand, within CA264_16350 at 3805.913 kb on + strand, within CA264_16350 at 3805.942 kb on + strand, within CA264_16350 at 3806.010 kb on - strand, within CA264_16350 at 3806.094 kb on + strand, within CA264_16350 at 3806.154 kb on + strand, within CA264_16350 at 3806.155 kb on - strand, within CA264_16350 at 3806.310 kb on - strand at 3806.310 kb on - strand at 3806.317 kb on + strand at 3806.317 kb on + strand at 3806.393 kb on + strand at 3806.394 kb on - strand at 3806.510 kb on + strand at 3806.510 kb on - strand at 3806.512 kb on + strand at 3806.527 kb on + strand at 3806.533 kb on + strand at 3806.593 kb on + strand at 3806.593 kb on + strand at 3806.593 kb on + strand at 3806.748 kb on + strand, within CA264_16355 at 3806.766 kb on - strand, within CA264_16355 at 3806.820 kb on - strand, within CA264_16355 at 3806.949 kb on - strand, within CA264_16355 at 3807.185 kb on + strand, within CA264_16355 at 3807.185 kb on + strand, within CA264_16355 at 3807.186 kb on - strand, within CA264_16355 at 3807.186 kb on - strand, within CA264_16355 at 3807.279 kb on - strand, within CA264_16355 at 3807.319 kb on - strand at 3807.348 kb on + strand at 3807.384 kb on + strand at 3807.388 kb on + strand at 3807.391 kb on + strand at 3807.483 kb on + strand at 3807.608 kb on + strand, within CA264_16360 at 3807.630 kb on + strand, within CA264_16360 at 3807.816 kb on + strand, within CA264_16360 at 3807.904 kb on + strand, within CA264_16360 at 3807.905 kb on - strand, within CA264_16360 at 3808.091 kb on + strand, within CA264_16360 at 3808.110 kb on - strand, within CA264_16360 at 3808.132 kb on - strand, within CA264_16360 at 3808.312 kb on - strand, within CA264_16360 at 3808.348 kb on + strand, within CA264_16360 at 3808.349 kb on - strand, within CA264_16360
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,805,514 + CA264_16350 0.49 -2.1 3,805,515 - CA264_16350 0.49 -1.9 3,805,578 + CA264_16350 0.53 +1.8 3,805,639 - CA264_16350 0.56 -1.7 3,805,679 - CA264_16350 0.58 -1.4 3,805,682 + CA264_16350 0.59 -0.0 3,805,724 + CA264_16350 0.61 -0.8 3,805,849 - CA264_16350 0.68 -0.9 3,805,876 - CA264_16350 0.69 -0.3 3,805,913 + CA264_16350 0.71 -0.1 3,805,942 + CA264_16350 0.73 +0.1 3,806,010 - CA264_16350 0.77 +0.3 3,806,094 + CA264_16350 0.81 -0.5 3,806,154 + CA264_16350 0.84 -0.0 3,806,155 - CA264_16350 0.85 +0.1 3,806,310 - -0.2 3,806,310 - -0.2 3,806,317 + +0.3 3,806,317 + +0.8 3,806,393 + -0.0 3,806,394 - -0.7 3,806,510 + -0.7 3,806,510 - +0.4 3,806,512 + -0.1 3,806,527 + -0.4 3,806,533 + -0.1 3,806,593 + -0.0 3,806,593 + -0.0 3,806,593 + -1.0 3,806,748 + CA264_16355 0.28 -0.3 3,806,766 - CA264_16355 0.30 -0.7 3,806,820 - CA264_16355 0.36 +0.0 3,806,949 - CA264_16355 0.51 -2.1 3,807,185 + CA264_16355 0.79 -1.7 3,807,185 + CA264_16355 0.79 -0.9 3,807,186 - CA264_16355 0.79 -0.4 3,807,186 - CA264_16355 0.79 -1.0 3,807,279 - CA264_16355 0.90 +0.6 3,807,319 - -0.2 3,807,348 + -1.0 3,807,384 + -0.2 3,807,388 + +0.1 3,807,391 + +0.6 3,807,483 + +0.6 3,807,608 + CA264_16360 0.14 -0.7 3,807,630 + CA264_16360 0.15 +1.0 3,807,816 + CA264_16360 0.27 +0.0 3,807,904 + CA264_16360 0.32 +0.6 3,807,905 - CA264_16360 0.32 -0.6 3,808,091 + CA264_16360 0.44 -0.6 3,808,110 - CA264_16360 0.45 +0.4 3,808,132 - CA264_16360 0.47 +0.3 3,808,312 - CA264_16360 0.58 -0.7 3,808,348 + CA264_16360 0.60 -0.7 3,808,349 - CA264_16360 0.60 -1.1
Or see this region's nucleotide sequence