Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15950 and CA264_15955 are separated by 42 nucleotides CA264_15955 and CA264_15960 are separated by 96 nucleotides CA264_15960 and CA264_15965 are separated by 2 nucleotides CA264_15965 and CA264_15970 are separated by 60 nucleotides CA264_15970 and CA264_15975 are separated by 28 nucleotides
CA264_15950: CA264_15950 - hypothetical protein, at 3,720,217 to 3,721,500
_15950
CA264_15955: CA264_15955 - glycine C-acetyltransferase, at 3,721,543 to 3,722,733
_15955
CA264_15960: CA264_15960 - hypothetical protein, at 3,722,830 to 3,723,117
_15960
CA264_15965: CA264_15965 - hypothetical protein, at 3,723,120 to 3,723,326
_15965
CA264_15970: CA264_15970 - hypothetical protein, at 3,723,387 to 3,723,578
_15970
CA264_15975: CA264_15975 - TIGR00159 family protein, at 3,723,607 to 3,724,446
_15975
Position (kb)
3721
3722
3723 Strain fitness (log2 ratio)
-2
-1
0
1 at 3720.584 kb on + strand, within CA264_15950 at 3720.681 kb on - strand, within CA264_15950 at 3720.685 kb on - strand, within CA264_15950 at 3720.777 kb on - strand, within CA264_15950 at 3720.870 kb on + strand, within CA264_15950 at 3721.341 kb on + strand, within CA264_15950 at 3721.341 kb on + strand, within CA264_15950 at 3721.449 kb on - strand at 3721.504 kb on + strand at 3721.505 kb on - strand at 3721.505 kb on - strand at 3721.508 kb on + strand at 3721.546 kb on + strand at 3721.568 kb on + strand at 3721.590 kb on - strand at 3721.624 kb on - strand at 3721.624 kb on - strand at 3721.624 kb on - strand at 3721.630 kb on - strand at 3721.630 kb on - strand at 3721.678 kb on - strand, within CA264_15955 at 3721.786 kb on - strand, within CA264_15955 at 3721.786 kb on - strand, within CA264_15955 at 3721.824 kb on + strand, within CA264_15955 at 3721.829 kb on + strand, within CA264_15955 at 3721.829 kb on + strand, within CA264_15955 at 3721.830 kb on - strand, within CA264_15955 at 3721.830 kb on - strand, within CA264_15955 at 3721.865 kb on - strand, within CA264_15955 at 3721.865 kb on - strand, within CA264_15955 at 3722.143 kb on + strand, within CA264_15955 at 3722.144 kb on - strand, within CA264_15955 at 3722.218 kb on + strand, within CA264_15955 at 3722.241 kb on - strand, within CA264_15955 at 3722.358 kb on + strand, within CA264_15955 at 3722.381 kb on + strand, within CA264_15955 at 3722.429 kb on + strand, within CA264_15955 at 3722.587 kb on + strand, within CA264_15955 at 3722.588 kb on - strand, within CA264_15955 at 3722.602 kb on + strand, within CA264_15955 at 3722.602 kb on + strand, within CA264_15955 at 3722.605 kb on + strand, within CA264_15955 at 3722.680 kb on - strand at 3722.706 kb on - strand at 3722.706 kb on - strand at 3722.798 kb on + strand at 3722.798 kb on + strand at 3722.805 kb on + strand at 3722.830 kb on - strand at 3722.836 kb on - strand at 3722.840 kb on + strand at 3722.840 kb on + strand at 3722.841 kb on - strand at 3722.841 kb on - strand at 3722.861 kb on + strand, within CA264_15960 at 3722.940 kb on + strand, within CA264_15960 at 3722.941 kb on - strand, within CA264_15960 at 3722.941 kb on - strand, within CA264_15960 at 3722.942 kb on + strand, within CA264_15960 at 3722.943 kb on - strand, within CA264_15960 at 3722.943 kb on - strand, within CA264_15960 at 3722.947 kb on + strand, within CA264_15960 at 3722.947 kb on + strand, within CA264_15960 at 3722.947 kb on + strand, within CA264_15960 at 3722.948 kb on - strand, within CA264_15960 at 3722.965 kb on - strand, within CA264_15960 at 3722.965 kb on - strand, within CA264_15960 at 3722.971 kb on + strand, within CA264_15960 at 3723.002 kb on - strand, within CA264_15960 at 3723.018 kb on + strand, within CA264_15960 at 3723.111 kb on - strand at 3723.172 kb on - strand, within CA264_15965 at 3723.172 kb on - strand, within CA264_15965 at 3723.172 kb on - strand, within CA264_15965 at 3723.254 kb on - strand, within CA264_15965 at 3723.265 kb on + strand, within CA264_15965 at 3723.266 kb on - strand, within CA264_15965 at 3723.289 kb on - strand, within CA264_15965 at 3723.298 kb on + strand, within CA264_15965 at 3723.303 kb on + strand, within CA264_15965 at 3723.324 kb on + strand at 3723.324 kb on + strand at 3723.386 kb on + strand at 3723.391 kb on + strand at 3723.436 kb on + strand, within CA264_15970 at 3723.436 kb on + strand, within CA264_15970 at 3723.437 kb on - strand, within CA264_15970 at 3723.516 kb on + strand, within CA264_15970 at 3723.542 kb on - strand, within CA264_15970 at 3723.546 kb on + strand, within CA264_15970 at 3723.546 kb on + strand, within CA264_15970 at 3723.547 kb on - strand, within CA264_15970 at 3723.547 kb on - strand, within CA264_15970 at 3723.547 kb on - strand, within CA264_15970 at 3723.551 kb on - strand, within CA264_15970 at 3723.551 kb on - strand, within CA264_15970 at 3723.576 kb on + strand at 3723.587 kb on - strand at 3723.591 kb on + strand at 3723.608 kb on + strand at 3723.609 kb on - strand at 3723.609 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,720,584 + CA264_15950 0.29 -1.8 3,720,681 - CA264_15950 0.36 -0.2 3,720,685 - CA264_15950 0.36 -0.3 3,720,777 - CA264_15950 0.44 -0.2 3,720,870 + CA264_15950 0.51 -0.7 3,721,341 + CA264_15950 0.88 +0.8 3,721,341 + CA264_15950 0.88 -0.8 3,721,449 - -0.7 3,721,504 + -0.3 3,721,505 - -0.1 3,721,505 - +0.6 3,721,508 + -0.4 3,721,546 + +0.7 3,721,568 + -0.8 3,721,590 - -1.5 3,721,624 - -0.8 3,721,624 - -0.6 3,721,624 - -0.8 3,721,630 - -1.2 3,721,630 - -1.4 3,721,678 - CA264_15955 0.11 -0.8 3,721,786 - CA264_15955 0.20 -0.6 3,721,786 - CA264_15955 0.20 -0.8 3,721,824 + CA264_15955 0.24 -0.7 3,721,829 + CA264_15955 0.24 -1.3 3,721,829 + CA264_15955 0.24 -1.3 3,721,830 - CA264_15955 0.24 -0.8 3,721,830 - CA264_15955 0.24 -2.3 3,721,865 - CA264_15955 0.27 -0.8 3,721,865 - CA264_15955 0.27 -0.6 3,722,143 + CA264_15955 0.50 +1.7 3,722,144 - CA264_15955 0.50 -0.4 3,722,218 + CA264_15955 0.57 +1.0 3,722,241 - CA264_15955 0.59 -0.4 3,722,358 + CA264_15955 0.68 +0.7 3,722,381 + CA264_15955 0.70 -0.1 3,722,429 + CA264_15955 0.74 +1.4 3,722,587 + CA264_15955 0.88 -0.5 3,722,588 - CA264_15955 0.88 -1.1 3,722,602 + CA264_15955 0.89 +0.2 3,722,602 + CA264_15955 0.89 +0.4 3,722,605 + CA264_15955 0.89 -0.4 3,722,680 - -0.6 3,722,706 - -1.4 3,722,706 - -0.9 3,722,798 + -1.0 3,722,798 + +1.1 3,722,805 + +0.1 3,722,830 - +1.1 3,722,836 - +0.8 3,722,840 + -0.2 3,722,840 + +1.2 3,722,841 - -0.3 3,722,841 - +0.3 3,722,861 + CA264_15960 0.11 -0.4 3,722,940 + CA264_15960 0.38 +0.2 3,722,941 - CA264_15960 0.39 -1.2 3,722,941 - CA264_15960 0.39 +0.7 3,722,942 + CA264_15960 0.39 -0.8 3,722,943 - CA264_15960 0.39 +0.3 3,722,943 - CA264_15960 0.39 -0.0 3,722,947 + CA264_15960 0.41 -0.9 3,722,947 + CA264_15960 0.41 -0.3 3,722,947 + CA264_15960 0.41 +0.7 3,722,948 - CA264_15960 0.41 -2.0 3,722,965 - CA264_15960 0.47 -0.9 3,722,965 - CA264_15960 0.47 -1.3 3,722,971 + CA264_15960 0.49 -0.2 3,723,002 - CA264_15960 0.60 +0.2 3,723,018 + CA264_15960 0.65 -0.1 3,723,111 - -0.2 3,723,172 - CA264_15965 0.25 +0.1 3,723,172 - CA264_15965 0.25 -0.0 3,723,172 - CA264_15965 0.25 -0.1 3,723,254 - CA264_15965 0.65 -0.4 3,723,265 + CA264_15965 0.70 +0.7 3,723,266 - CA264_15965 0.71 -0.2 3,723,289 - CA264_15965 0.82 -0.8 3,723,298 + CA264_15965 0.86 +0.0 3,723,303 + CA264_15965 0.88 -0.7 3,723,324 + +0.4 3,723,324 + +0.3 3,723,386 + -0.5 3,723,391 + +0.7 3,723,436 + CA264_15970 0.26 +0.1 3,723,436 + CA264_15970 0.26 +1.2 3,723,437 - CA264_15970 0.26 +0.5 3,723,516 + CA264_15970 0.67 +0.8 3,723,542 - CA264_15970 0.81 -1.5 3,723,546 + CA264_15970 0.83 -0.1 3,723,546 + CA264_15970 0.83 +1.5 3,723,547 - CA264_15970 0.83 +0.2 3,723,547 - CA264_15970 0.83 -0.1 3,723,547 - CA264_15970 0.83 -0.1 3,723,551 - CA264_15970 0.85 +0.8 3,723,551 - CA264_15970 0.85 -0.2 3,723,576 + +0.1 3,723,587 - -0.0 3,723,591 + -1.4 3,723,608 + -0.2 3,723,609 - +0.2 3,723,609 - +0.5
Or see this region's nucleotide sequence