Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15190 and CA264_15195 overlap by 11 nucleotides CA264_15195 and CA264_15200 are separated by 45 nucleotides CA264_15200 and CA264_15205 are separated by 104 nucleotides
CA264_15190: CA264_15190 - hypothetical protein, at 3,559,316 to 3,559,573
_15190
CA264_15195: CA264_15195 - phosphate ABC transporter substrate-binding protein, PhoT family, at 3,559,563 to 3,560,504
_15195
CA264_15200: CA264_15200 - hypothetical protein, at 3,560,550 to 3,562,193
_15200
CA264_15205: CA264_15205 - RNA pseudouridine synthase, at 3,562,298 to 3,563,332
_15205
Position (kb)
3560
3561
3562
3563 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3559.562 kb on + strand at 3559.563 kb on - strand at 3559.613 kb on - strand at 3559.735 kb on - strand, within CA264_15195 at 3559.916 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.102 kb on + strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.103 kb on - strand, within CA264_15195 at 3560.129 kb on + strand, within CA264_15195 at 3560.154 kb on + strand, within CA264_15195 at 3560.155 kb on - strand, within CA264_15195 at 3560.320 kb on - strand, within CA264_15195 at 3560.358 kb on + strand, within CA264_15195 at 3560.359 kb on - strand, within CA264_15195 at 3560.409 kb on + strand, within CA264_15195 at 3560.410 kb on - strand at 3560.508 kb on + strand at 3560.515 kb on + strand at 3560.568 kb on + strand at 3560.676 kb on - strand at 3560.679 kb on + strand at 3560.679 kb on + strand at 3560.680 kb on - strand at 3560.680 kb on - strand at 3560.682 kb on - strand at 3560.697 kb on - strand at 3560.739 kb on - strand, within CA264_15200 at 3560.926 kb on + strand, within CA264_15200 at 3560.949 kb on + strand, within CA264_15200 at 3561.050 kb on - strand, within CA264_15200 at 3561.135 kb on + strand, within CA264_15200 at 3561.147 kb on + strand, within CA264_15200 at 3561.169 kb on - strand, within CA264_15200 at 3561.270 kb on + strand, within CA264_15200 at 3561.271 kb on - strand, within CA264_15200 at 3561.274 kb on - strand, within CA264_15200 at 3561.323 kb on - strand, within CA264_15200 at 3561.565 kb on - strand, within CA264_15200 at 3561.699 kb on - strand, within CA264_15200 at 3561.717 kb on - strand, within CA264_15200 at 3561.735 kb on - strand, within CA264_15200 at 3561.769 kb on - strand, within CA264_15200 at 3561.769 kb on - strand, within CA264_15200 at 3561.771 kb on + strand, within CA264_15200 at 3561.774 kb on + strand, within CA264_15200 at 3561.782 kb on + strand, within CA264_15200 at 3561.789 kb on + strand, within CA264_15200 at 3561.789 kb on + strand, within CA264_15200 at 3561.790 kb on - strand, within CA264_15200 at 3561.791 kb on + strand, within CA264_15200 at 3561.792 kb on - strand, within CA264_15200 at 3561.871 kb on - strand, within CA264_15200 at 3561.901 kb on - strand, within CA264_15200 at 3561.907 kb on - strand, within CA264_15200 at 3561.979 kb on - strand, within CA264_15200 at 3561.982 kb on - strand, within CA264_15200 at 3562.063 kb on - strand at 3562.066 kb on - strand at 3562.066 kb on - strand at 3562.072 kb on - strand at 3562.209 kb on - strand at 3562.209 kb on - strand at 3562.213 kb on + strand at 3562.316 kb on + strand at 3562.470 kb on + strand, within CA264_15205 at 3562.512 kb on + strand, within CA264_15205 at 3562.513 kb on - strand, within CA264_15205 at 3562.612 kb on - strand, within CA264_15205 at 3562.612 kb on - strand, within CA264_15205 at 3562.677 kb on - strand, within CA264_15205 at 3562.723 kb on + strand, within CA264_15205 at 3562.767 kb on + strand, within CA264_15205 at 3562.770 kb on + strand, within CA264_15205 at 3562.770 kb on + strand, within CA264_15205 at 3562.950 kb on - strand, within CA264_15205 at 3562.969 kb on + strand, within CA264_15205 at 3562.971 kb on + strand, within CA264_15205 at 3562.972 kb on - strand, within CA264_15205 at 3563.121 kb on - strand, within CA264_15205 at 3563.186 kb on + strand, within CA264_15205 at 3563.186 kb on + strand, within CA264_15205 at 3563.187 kb on - strand, within CA264_15205
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,559,562 + +0.4 3,559,563 - +0.2 3,559,613 - -0.4 3,559,735 - CA264_15195 0.18 -0.9 3,559,916 + CA264_15195 0.37 -0.2 3,560,102 + CA264_15195 0.57 -1.0 3,560,102 + CA264_15195 0.57 -0.9 3,560,103 - CA264_15195 0.57 -1.1 3,560,103 - CA264_15195 0.57 -2.6 3,560,103 - CA264_15195 0.57 +0.3 3,560,103 - CA264_15195 0.57 -0.6 3,560,129 + CA264_15195 0.60 -1.8 3,560,154 + CA264_15195 0.63 +0.8 3,560,155 - CA264_15195 0.63 +0.7 3,560,320 - CA264_15195 0.80 -2.4 3,560,358 + CA264_15195 0.84 -1.1 3,560,359 - CA264_15195 0.85 -1.4 3,560,409 + CA264_15195 0.90 +0.1 3,560,410 - -0.9 3,560,508 + +0.3 3,560,515 + -1.3 3,560,568 + -0.9 3,560,676 - -0.9 3,560,679 + +0.7 3,560,679 + -1.1 3,560,680 - -1.0 3,560,680 - -1.0 3,560,682 - -1.2 3,560,697 - -1.3 3,560,739 - CA264_15200 0.11 -1.5 3,560,926 + CA264_15200 0.23 -0.3 3,560,949 + CA264_15200 0.24 -0.4 3,561,050 - CA264_15200 0.30 -0.8 3,561,135 + CA264_15200 0.36 -1.0 3,561,147 + CA264_15200 0.36 +0.5 3,561,169 - CA264_15200 0.38 -0.0 3,561,270 + CA264_15200 0.44 -1.0 3,561,271 - CA264_15200 0.44 -0.5 3,561,274 - CA264_15200 0.44 -1.7 3,561,323 - CA264_15200 0.47 -0.8 3,561,565 - CA264_15200 0.62 -0.7 3,561,699 - CA264_15200 0.70 +1.0 3,561,717 - CA264_15200 0.71 -0.6 3,561,735 - CA264_15200 0.72 -1.2 3,561,769 - CA264_15200 0.74 -1.5 3,561,769 - CA264_15200 0.74 -1.4 3,561,771 + CA264_15200 0.74 -0.6 3,561,774 + CA264_15200 0.74 -0.2 3,561,782 + CA264_15200 0.75 -2.9 3,561,789 + CA264_15200 0.75 -1.1 3,561,789 + CA264_15200 0.75 -1.0 3,561,790 - CA264_15200 0.75 -1.8 3,561,791 + CA264_15200 0.75 -1.9 3,561,792 - CA264_15200 0.76 +0.8 3,561,871 - CA264_15200 0.80 -0.6 3,561,901 - CA264_15200 0.82 -0.9 3,561,907 - CA264_15200 0.83 -1.2 3,561,979 - CA264_15200 0.87 -0.5 3,561,982 - CA264_15200 0.87 -1.0 3,562,063 - -0.4 3,562,066 - -1.0 3,562,066 - -1.2 3,562,072 - -1.4 3,562,209 - +0.5 3,562,209 - -0.5 3,562,213 + +0.8 3,562,316 + -1.3 3,562,470 + CA264_15205 0.17 -0.4 3,562,512 + CA264_15205 0.21 -0.1 3,562,513 - CA264_15205 0.21 +0.4 3,562,612 - CA264_15205 0.30 -0.3 3,562,612 - CA264_15205 0.30 -0.4 3,562,677 - CA264_15205 0.37 +1.5 3,562,723 + CA264_15205 0.41 -0.0 3,562,767 + CA264_15205 0.45 -0.6 3,562,770 + CA264_15205 0.46 +1.1 3,562,770 + CA264_15205 0.46 +0.0 3,562,950 - CA264_15205 0.63 -0.6 3,562,969 + CA264_15205 0.65 +0.7 3,562,971 + CA264_15205 0.65 -0.2 3,562,972 - CA264_15205 0.65 -0.2 3,563,121 - CA264_15205 0.80 -0.9 3,563,186 + CA264_15205 0.86 -0.6 3,563,186 + CA264_15205 0.86 +0.0 3,563,187 - CA264_15205 0.86 +1.0
Or see this region's nucleotide sequence