Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13980 and CA264_13985 are separated by 19 nucleotides CA264_13985 and CA264_13990 are separated by 97 nucleotides
CA264_13980: CA264_13980 - alpha-glucuronidase, at 3,271,746 to 3,273,911
_13980
CA264_13985: CA264_13985 - 3-oxoacyl-ACP reductase, at 3,273,931 to 3,274,689
_13985
CA264_13990: CA264_13990 - 1,4-beta-xylanase, at 3,274,787 to 3,275,965
_13990
Position (kb)
3273
3274
3275 Strain fitness (log2 ratio)
-2
-1
0
1 at 3273.016 kb on - strand, within CA264_13980 at 3273.016 kb on - strand, within CA264_13980 at 3273.031 kb on - strand, within CA264_13980 at 3273.057 kb on + strand, within CA264_13980 at 3273.057 kb on + strand, within CA264_13980 at 3273.058 kb on - strand, within CA264_13980 at 3273.128 kb on + strand, within CA264_13980 at 3273.130 kb on + strand, within CA264_13980 at 3273.130 kb on + strand, within CA264_13980 at 3273.130 kb on + strand, within CA264_13980 at 3273.131 kb on - strand, within CA264_13980 at 3273.345 kb on + strand, within CA264_13980 at 3273.346 kb on - strand, within CA264_13980 at 3273.447 kb on + strand, within CA264_13980 at 3273.519 kb on + strand, within CA264_13980 at 3273.614 kb on - strand, within CA264_13980 at 3273.804 kb on + strand at 3273.822 kb on - strand at 3273.860 kb on + strand at 3273.908 kb on - strand at 3273.909 kb on + strand at 3273.915 kb on + strand at 3273.916 kb on - strand at 3273.916 kb on - strand at 3273.916 kb on - strand at 3273.916 kb on - strand at 3273.926 kb on + strand at 3273.926 kb on + strand at 3273.926 kb on + strand at 3273.927 kb on - strand at 3273.940 kb on - strand at 3273.946 kb on - strand at 3274.105 kb on + strand, within CA264_13985 at 3274.209 kb on + strand, within CA264_13985 at 3274.210 kb on - strand, within CA264_13985 at 3274.228 kb on - strand, within CA264_13985 at 3274.263 kb on - strand, within CA264_13985 at 3274.266 kb on + strand, within CA264_13985 at 3274.267 kb on - strand, within CA264_13985 at 3274.267 kb on - strand, within CA264_13985 at 3274.370 kb on - strand, within CA264_13985 at 3274.577 kb on + strand, within CA264_13985 at 3274.609 kb on + strand, within CA264_13985 at 3274.610 kb on - strand, within CA264_13985 at 3274.610 kb on - strand, within CA264_13985 at 3274.612 kb on + strand, within CA264_13985 at 3274.613 kb on - strand, within CA264_13985 at 3275.006 kb on - strand, within CA264_13990 at 3275.081 kb on + strand, within CA264_13990 at 3275.082 kb on - strand, within CA264_13990 at 3275.150 kb on - strand, within CA264_13990 at 3275.398 kb on + strand, within CA264_13990 at 3275.399 kb on - strand, within CA264_13990 at 3275.426 kb on + strand, within CA264_13990 at 3275.427 kb on - strand, within CA264_13990 at 3275.435 kb on + strand, within CA264_13990 at 3275.437 kb on + strand, within CA264_13990 at 3275.437 kb on + strand, within CA264_13990 at 3275.608 kb on - strand, within CA264_13990
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,273,016 - CA264_13980 0.59 -0.6 3,273,016 - CA264_13980 0.59 -0.7 3,273,031 - CA264_13980 0.59 -1.8 3,273,057 + CA264_13980 0.61 -1.0 3,273,057 + CA264_13980 0.61 -0.3 3,273,058 - CA264_13980 0.61 -0.7 3,273,128 + CA264_13980 0.64 -0.4 3,273,130 + CA264_13980 0.64 -0.3 3,273,130 + CA264_13980 0.64 -0.3 3,273,130 + CA264_13980 0.64 +0.2 3,273,131 - CA264_13980 0.64 -0.1 3,273,345 + CA264_13980 0.74 -1.0 3,273,346 - CA264_13980 0.74 +0.2 3,273,447 + CA264_13980 0.79 -0.6 3,273,519 + CA264_13980 0.82 -0.8 3,273,614 - CA264_13980 0.86 -1.8 3,273,804 + -0.9 3,273,822 - -0.1 3,273,860 + -1.2 3,273,908 - -0.6 3,273,909 + -0.6 3,273,915 + +1.5 3,273,916 - -0.4 3,273,916 - +0.4 3,273,916 - -0.3 3,273,916 - +1.2 3,273,926 + -0.5 3,273,926 + -0.3 3,273,926 + -0.6 3,273,927 - +0.4 3,273,940 - +0.1 3,273,946 - -1.0 3,274,105 + CA264_13985 0.23 +0.8 3,274,209 + CA264_13985 0.37 -0.9 3,274,210 - CA264_13985 0.37 -0.8 3,274,228 - CA264_13985 0.39 -1.1 3,274,263 - CA264_13985 0.44 -0.1 3,274,266 + CA264_13985 0.44 +0.3 3,274,267 - CA264_13985 0.44 -0.6 3,274,267 - CA264_13985 0.44 -0.4 3,274,370 - CA264_13985 0.58 -1.2 3,274,577 + CA264_13985 0.85 -0.9 3,274,609 + CA264_13985 0.89 -1.3 3,274,610 - CA264_13985 0.89 -0.6 3,274,610 - CA264_13985 0.89 -0.7 3,274,612 + CA264_13985 0.90 -0.7 3,274,613 - CA264_13985 0.90 -0.5 3,275,006 - CA264_13990 0.19 -0.1 3,275,081 + CA264_13990 0.25 -0.4 3,275,082 - CA264_13990 0.25 -0.2 3,275,150 - CA264_13990 0.31 -0.9 3,275,398 + CA264_13990 0.52 -0.8 3,275,399 - CA264_13990 0.52 -0.2 3,275,426 + CA264_13990 0.54 -0.5 3,275,427 - CA264_13990 0.54 -0.2 3,275,435 + CA264_13990 0.55 -1.0 3,275,437 + CA264_13990 0.55 +0.2 3,275,437 + CA264_13990 0.55 -2.4 3,275,608 - CA264_13990 0.70 +0.2
Or see this region's nucleotide sequence