Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13565 and CA264_13570 are separated by 307 nucleotides CA264_13570 and CA264_13575 are separated by 245 nucleotides
CA264_13565: CA264_13565 - serine protease, at 3,165,667 to 3,167,916
_13565
CA264_13570: CA264_13570 - beta-N-acetylhexosaminidase, at 3,168,224 to 3,170,557
_13570
CA264_13575: CA264_13575 - hypothetical protein, at 3,170,803 to 3,171,858
_13575
Position (kb)
3168
3169
3170
3171 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3167.248 kb on + strand, within CA264_13565 at 3167.249 kb on - strand, within CA264_13565 at 3167.285 kb on + strand, within CA264_13565 at 3167.285 kb on + strand, within CA264_13565 at 3167.285 kb on + strand, within CA264_13565 at 3167.286 kb on - strand, within CA264_13565 at 3167.286 kb on - strand, within CA264_13565 at 3167.287 kb on + strand, within CA264_13565 at 3167.287 kb on + strand, within CA264_13565 at 3167.287 kb on + strand, within CA264_13565 at 3167.288 kb on - strand, within CA264_13565 at 3167.301 kb on + strand, within CA264_13565 at 3167.302 kb on - strand, within CA264_13565 at 3167.307 kb on + strand, within CA264_13565 at 3167.307 kb on + strand, within CA264_13565 at 3167.308 kb on - strand, within CA264_13565 at 3167.341 kb on + strand, within CA264_13565 at 3167.341 kb on + strand, within CA264_13565 at 3167.341 kb on + strand, within CA264_13565 at 3167.342 kb on - strand, within CA264_13565 at 3167.343 kb on + strand, within CA264_13565 at 3167.343 kb on + strand, within CA264_13565 at 3167.366 kb on - strand, within CA264_13565 at 3167.371 kb on + strand, within CA264_13565 at 3167.375 kb on - strand, within CA264_13565 at 3167.456 kb on - strand, within CA264_13565 at 3167.456 kb on - strand, within CA264_13565 at 3167.490 kb on + strand, within CA264_13565 at 3167.490 kb on + strand, within CA264_13565 at 3167.695 kb on - strand at 3167.738 kb on + strand at 3167.739 kb on - strand at 3168.016 kb on - strand at 3168.164 kb on + strand at 3168.165 kb on - strand at 3168.184 kb on - strand at 3168.243 kb on + strand at 3168.243 kb on + strand at 3168.243 kb on + strand at 3168.250 kb on - strand at 3168.273 kb on + strand at 3168.274 kb on - strand at 3168.284 kb on + strand at 3168.285 kb on - strand at 3168.444 kb on + strand at 3168.462 kb on + strand, within CA264_13570 at 3168.462 kb on + strand, within CA264_13570 at 3168.561 kb on - strand, within CA264_13570 at 3168.561 kb on - strand, within CA264_13570 at 3168.562 kb on + strand, within CA264_13570 at 3168.698 kb on - strand, within CA264_13570 at 3168.924 kb on - strand, within CA264_13570 at 3169.174 kb on + strand, within CA264_13570 at 3169.226 kb on + strand, within CA264_13570 at 3169.226 kb on + strand, within CA264_13570 at 3169.226 kb on + strand, within CA264_13570 at 3169.226 kb on + strand, within CA264_13570 at 3169.227 kb on - strand, within CA264_13570 at 3169.227 kb on - strand, within CA264_13570 at 3169.227 kb on - strand, within CA264_13570 at 3169.338 kb on - strand, within CA264_13570 at 3169.366 kb on - strand, within CA264_13570 at 3169.366 kb on - strand, within CA264_13570 at 3169.438 kb on + strand, within CA264_13570 at 3169.491 kb on - strand, within CA264_13570 at 3169.491 kb on - strand, within CA264_13570 at 3169.520 kb on + strand, within CA264_13570 at 3169.593 kb on + strand, within CA264_13570 at 3169.593 kb on + strand, within CA264_13570 at 3169.643 kb on + strand, within CA264_13570 at 3169.643 kb on + strand, within CA264_13570 at 3169.645 kb on + strand, within CA264_13570 at 3169.679 kb on + strand, within CA264_13570 at 3169.680 kb on - strand, within CA264_13570 at 3169.702 kb on - strand, within CA264_13570 at 3169.702 kb on - strand, within CA264_13570 at 3169.702 kb on - strand, within CA264_13570 at 3169.702 kb on - strand, within CA264_13570 at 3169.702 kb on - strand, within CA264_13570 at 3169.706 kb on + strand, within CA264_13570 at 3169.706 kb on + strand, within CA264_13570 at 3169.706 kb on + strand, within CA264_13570 at 3169.706 kb on + strand, within CA264_13570 at 3169.707 kb on - strand, within CA264_13570 at 3169.714 kb on + strand, within CA264_13570 at 3169.723 kb on + strand, within CA264_13570 at 3169.814 kb on + strand, within CA264_13570 at 3169.831 kb on - strand, within CA264_13570 at 3169.836 kb on - strand, within CA264_13570 at 3169.938 kb on - strand, within CA264_13570 at 3169.938 kb on - strand, within CA264_13570 at 3169.940 kb on + strand, within CA264_13570 at 3169.941 kb on - strand, within CA264_13570 at 3170.106 kb on + strand, within CA264_13570 at 3170.152 kb on + strand, within CA264_13570 at 3170.152 kb on + strand, within CA264_13570 at 3170.153 kb on - strand, within CA264_13570 at 3170.154 kb on + strand, within CA264_13570 at 3170.154 kb on + strand, within CA264_13570 at 3170.154 kb on + strand, within CA264_13570 at 3170.155 kb on - strand, within CA264_13570 at 3170.190 kb on - strand, within CA264_13570 at 3170.190 kb on - strand, within CA264_13570 at 3170.326 kb on - strand at 3170.330 kb on + strand at 3170.331 kb on - strand at 3170.331 kb on - strand at 3170.331 kb on - strand at 3170.368 kb on + strand at 3170.368 kb on + strand at 3170.410 kb on - strand at 3170.456 kb on + strand at 3170.457 kb on - strand at 3170.468 kb on - strand at 3170.575 kb on - strand at 3170.646 kb on - strand at 3170.769 kb on + strand at 3170.867 kb on + strand at 3170.867 kb on + strand at 3170.979 kb on + strand, within CA264_13575 at 3170.979 kb on + strand, within CA264_13575 at 3171.016 kb on + strand, within CA264_13575 at 3171.016 kb on + strand, within CA264_13575 at 3171.016 kb on + strand, within CA264_13575 at 3171.017 kb on - strand, within CA264_13575 at 3171.017 kb on - strand, within CA264_13575 at 3171.066 kb on - strand, within CA264_13575 at 3171.100 kb on + strand, within CA264_13575 at 3171.100 kb on + strand, within CA264_13575 at 3171.108 kb on - strand, within CA264_13575 at 3171.214 kb on - strand, within CA264_13575 at 3171.214 kb on - strand, within CA264_13575 at 3171.338 kb on + strand, within CA264_13575 at 3171.339 kb on - strand, within CA264_13575 at 3171.339 kb on - strand, within CA264_13575 at 3171.341 kb on + strand, within CA264_13575 at 3171.341 kb on + strand, within CA264_13575 at 3171.392 kb on + strand, within CA264_13575 at 3171.392 kb on + strand, within CA264_13575 at 3171.407 kb on - strand, within CA264_13575 at 3171.498 kb on + strand, within CA264_13575 at 3171.498 kb on + strand, within CA264_13575 at 3171.499 kb on - strand, within CA264_13575 at 3171.500 kb on + strand, within CA264_13575 at 3171.500 kb on + strand, within CA264_13575 at 3171.501 kb on - strand, within CA264_13575 at 3171.536 kb on + strand, within CA264_13575 at 3171.537 kb on - strand, within CA264_13575 at 3171.537 kb on - strand, within CA264_13575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,167,248 + CA264_13565 0.70 -0.4 3,167,249 - CA264_13565 0.70 +0.1 3,167,285 + CA264_13565 0.72 -0.3 3,167,285 + CA264_13565 0.72 -0.3 3,167,285 + CA264_13565 0.72 +0.3 3,167,286 - CA264_13565 0.72 +0.1 3,167,286 - CA264_13565 0.72 +0.4 3,167,287 + CA264_13565 0.72 +1.2 3,167,287 + CA264_13565 0.72 +0.3 3,167,287 + CA264_13565 0.72 -0.2 3,167,288 - CA264_13565 0.72 -1.0 3,167,301 + CA264_13565 0.73 +0.2 3,167,302 - CA264_13565 0.73 -1.6 3,167,307 + CA264_13565 0.73 -0.3 3,167,307 + CA264_13565 0.73 -0.9 3,167,308 - CA264_13565 0.73 -0.3 3,167,341 + CA264_13565 0.74 +0.6 3,167,341 + CA264_13565 0.74 -1.7 3,167,341 + CA264_13565 0.74 -0.4 3,167,342 - CA264_13565 0.74 -0.3 3,167,343 + CA264_13565 0.74 +0.3 3,167,343 + CA264_13565 0.74 +0.2 3,167,366 - CA264_13565 0.76 -0.6 3,167,371 + CA264_13565 0.76 +0.4 3,167,375 - CA264_13565 0.76 +0.5 3,167,456 - CA264_13565 0.80 +1.5 3,167,456 - CA264_13565 0.80 +0.7 3,167,490 + CA264_13565 0.81 -0.7 3,167,490 + CA264_13565 0.81 -1.1 3,167,695 - -1.3 3,167,738 + -0.3 3,167,739 - -0.3 3,168,016 - -0.1 3,168,164 + -0.1 3,168,165 - +0.5 3,168,184 - -0.2 3,168,243 + +0.7 3,168,243 + -0.1 3,168,243 + +1.2 3,168,250 - +0.3 3,168,273 + -0.2 3,168,274 - +0.2 3,168,284 + +0.1 3,168,285 - -0.3 3,168,444 + +0.7 3,168,462 + CA264_13570 0.10 -1.3 3,168,462 + CA264_13570 0.10 -0.3 3,168,561 - CA264_13570 0.14 -0.5 3,168,561 - CA264_13570 0.14 +0.0 3,168,562 + CA264_13570 0.14 -1.0 3,168,698 - CA264_13570 0.20 -0.3 3,168,924 - CA264_13570 0.30 +0.3 3,169,174 + CA264_13570 0.41 -1.3 3,169,226 + CA264_13570 0.43 -0.4 3,169,226 + CA264_13570 0.43 -0.2 3,169,226 + CA264_13570 0.43 -0.5 3,169,226 + CA264_13570 0.43 +0.3 3,169,227 - CA264_13570 0.43 +0.3 3,169,227 - CA264_13570 0.43 +0.5 3,169,227 - CA264_13570 0.43 +0.1 3,169,338 - CA264_13570 0.48 -0.5 3,169,366 - CA264_13570 0.49 -0.3 3,169,366 - CA264_13570 0.49 -0.3 3,169,438 + CA264_13570 0.52 +0.7 3,169,491 - CA264_13570 0.54 +0.3 3,169,491 - CA264_13570 0.54 -0.5 3,169,520 + CA264_13570 0.56 -1.1 3,169,593 + CA264_13570 0.59 +0.1 3,169,593 + CA264_13570 0.59 -0.6 3,169,643 + CA264_13570 0.61 +0.4 3,169,643 + CA264_13570 0.61 +1.2 3,169,645 + CA264_13570 0.61 +0.6 3,169,679 + CA264_13570 0.62 -0.3 3,169,680 - CA264_13570 0.62 -0.9 3,169,702 - CA264_13570 0.63 +0.2 3,169,702 - CA264_13570 0.63 +0.1 3,169,702 - CA264_13570 0.63 +0.2 3,169,702 - CA264_13570 0.63 -0.4 3,169,702 - CA264_13570 0.63 -0.7 3,169,706 + CA264_13570 0.63 -0.1 3,169,706 + CA264_13570 0.63 +0.6 3,169,706 + CA264_13570 0.63 +0.2 3,169,706 + CA264_13570 0.63 -2.0 3,169,707 - CA264_13570 0.64 +0.1 3,169,714 + CA264_13570 0.64 -1.1 3,169,723 + CA264_13570 0.64 -0.3 3,169,814 + CA264_13570 0.68 +0.1 3,169,831 - CA264_13570 0.69 -0.7 3,169,836 - CA264_13570 0.69 +0.2 3,169,938 - CA264_13570 0.73 +0.1 3,169,938 - CA264_13570 0.73 -1.1 3,169,940 + CA264_13570 0.74 -0.4 3,169,941 - CA264_13570 0.74 +1.0 3,170,106 + CA264_13570 0.81 -0.1 3,170,152 + CA264_13570 0.83 -0.2 3,170,152 + CA264_13570 0.83 -0.7 3,170,153 - CA264_13570 0.83 -1.3 3,170,154 + CA264_13570 0.83 -0.2 3,170,154 + CA264_13570 0.83 -0.1 3,170,154 + CA264_13570 0.83 +0.5 3,170,155 - CA264_13570 0.83 -0.5 3,170,190 - CA264_13570 0.84 -0.2 3,170,190 - CA264_13570 0.84 +0.5 3,170,326 - -0.5 3,170,330 + -0.2 3,170,331 - +0.8 3,170,331 - -0.5 3,170,331 - -0.4 3,170,368 + -0.2 3,170,368 + -0.3 3,170,410 - +0.2 3,170,456 + +1.5 3,170,457 - +0.1 3,170,468 - -1.5 3,170,575 - -1.1 3,170,646 - -1.5 3,170,769 + +0.9 3,170,867 + +0.2 3,170,867 + +0.2 3,170,979 + CA264_13575 0.17 -0.2 3,170,979 + CA264_13575 0.17 +2.0 3,171,016 + CA264_13575 0.20 -0.4 3,171,016 + CA264_13575 0.20 -0.6 3,171,016 + CA264_13575 0.20 +0.3 3,171,017 - CA264_13575 0.20 +0.6 3,171,017 - CA264_13575 0.20 +0.1 3,171,066 - CA264_13575 0.25 +0.3 3,171,100 + CA264_13575 0.28 -0.0 3,171,100 + CA264_13575 0.28 +0.0 3,171,108 - CA264_13575 0.29 +0.6 3,171,214 - CA264_13575 0.39 +0.3 3,171,214 - CA264_13575 0.39 -0.7 3,171,338 + CA264_13575 0.51 -2.3 3,171,339 - CA264_13575 0.51 -0.6 3,171,339 - CA264_13575 0.51 +0.4 3,171,341 + CA264_13575 0.51 -0.3 3,171,341 + CA264_13575 0.51 -0.8 3,171,392 + CA264_13575 0.56 -1.9 3,171,392 + CA264_13575 0.56 -0.1 3,171,407 - CA264_13575 0.57 +0.3 3,171,498 + CA264_13575 0.66 -0.6 3,171,498 + CA264_13575 0.66 +0.5 3,171,499 - CA264_13575 0.66 -0.0 3,171,500 + CA264_13575 0.66 +0.5 3,171,500 + CA264_13575 0.66 +0.7 3,171,501 - CA264_13575 0.66 +0.1 3,171,536 + CA264_13575 0.69 +0.3 3,171,537 - CA264_13575 0.70 +0.5 3,171,537 - CA264_13575 0.70 -0.3
Or see this region's nucleotide sequence