Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13305 and CA264_13310 are separated by 475 nucleotides CA264_13310 and CA264_13315 are separated by 74 nucleotides
CA264_13305: CA264_13305 - DNA mismatch repair protein MutL, at 3,101,484 to 3,103,346
_13305
CA264_13310: CA264_13310 - glycosyl hydrolase, at 3,103,822 to 3,106,722
_13310
CA264_13315: CA264_13315 - N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA, at 3,106,797 to 3,107,933
_13315
Position (kb)
3103
3104
3105
3106
3107 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3103.365 kb on - strand at 3103.371 kb on - strand at 3103.371 kb on - strand at 3103.373 kb on - strand at 3103.373 kb on - strand at 3103.373 kb on - strand at 3103.375 kb on - strand at 3103.389 kb on + strand at 3103.430 kb on + strand at 3103.476 kb on - strand at 3103.544 kb on + strand at 3103.544 kb on + strand at 3103.600 kb on + strand at 3103.600 kb on + strand at 3103.618 kb on - strand at 3103.634 kb on + strand at 3103.681 kb on + strand at 3103.727 kb on - strand at 3103.752 kb on + strand at 3103.756 kb on - strand at 3103.756 kb on - strand at 3103.760 kb on + strand at 3103.765 kb on + strand at 3103.770 kb on + strand at 3103.770 kb on + strand at 3103.788 kb on + strand at 3103.788 kb on + strand at 3103.988 kb on + strand at 3104.025 kb on + strand at 3104.031 kb on + strand at 3104.032 kb on - strand at 3104.032 kb on - strand at 3104.200 kb on + strand, within CA264_13310 at 3104.365 kb on + strand, within CA264_13310 at 3104.395 kb on - strand, within CA264_13310 at 3104.472 kb on + strand, within CA264_13310 at 3104.558 kb on + strand, within CA264_13310 at 3104.559 kb on - strand, within CA264_13310 at 3104.560 kb on + strand, within CA264_13310 at 3104.560 kb on + strand, within CA264_13310 at 3104.561 kb on - strand, within CA264_13310 at 3104.573 kb on + strand, within CA264_13310 at 3104.618 kb on + strand, within CA264_13310 at 3104.648 kb on - strand, within CA264_13310 at 3104.649 kb on + strand, within CA264_13310 at 3104.650 kb on - strand, within CA264_13310 at 3104.690 kb on + strand, within CA264_13310 at 3104.701 kb on + strand, within CA264_13310 at 3104.702 kb on - strand, within CA264_13310 at 3104.702 kb on - strand, within CA264_13310 at 3104.702 kb on - strand, within CA264_13310 at 3104.702 kb on - strand, within CA264_13310 at 3104.703 kb on + strand, within CA264_13310 at 3104.717 kb on + strand, within CA264_13310 at 3104.771 kb on + strand, within CA264_13310 at 3104.775 kb on + strand, within CA264_13310 at 3104.775 kb on + strand, within CA264_13310 at 3104.776 kb on - strand, within CA264_13310 at 3104.776 kb on - strand, within CA264_13310 at 3104.776 kb on - strand, within CA264_13310 at 3104.776 kb on - strand, within CA264_13310 at 3104.870 kb on - strand, within CA264_13310 at 3104.884 kb on - strand, within CA264_13310 at 3104.890 kb on + strand, within CA264_13310 at 3104.893 kb on - strand, within CA264_13310 at 3105.173 kb on + strand, within CA264_13310 at 3105.271 kb on + strand, within CA264_13310 at 3105.514 kb on + strand, within CA264_13310 at 3105.658 kb on + strand, within CA264_13310 at 3105.665 kb on - strand, within CA264_13310 at 3105.667 kb on + strand, within CA264_13310 at 3105.667 kb on + strand, within CA264_13310 at 3105.668 kb on - strand, within CA264_13310 at 3105.668 kb on - strand, within CA264_13310 at 3105.668 kb on - strand, within CA264_13310 at 3105.673 kb on + strand, within CA264_13310 at 3105.673 kb on + strand, within CA264_13310 at 3105.674 kb on - strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.716 kb on + strand, within CA264_13310 at 3105.726 kb on + strand, within CA264_13310 at 3105.804 kb on + strand, within CA264_13310 at 3105.804 kb on + strand, within CA264_13310 at 3105.944 kb on - strand, within CA264_13310 at 3105.967 kb on + strand, within CA264_13310 at 3105.967 kb on + strand, within CA264_13310 at 3105.983 kb on + strand, within CA264_13310 at 3105.994 kb on + strand, within CA264_13310 at 3106.082 kb on - strand, within CA264_13310 at 3106.082 kb on - strand, within CA264_13310 at 3106.106 kb on - strand, within CA264_13310 at 3106.174 kb on + strand, within CA264_13310 at 3106.174 kb on + strand, within CA264_13310 at 3106.204 kb on + strand, within CA264_13310 at 3106.204 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.261 kb on + strand, within CA264_13310 at 3106.262 kb on - strand, within CA264_13310 at 3106.262 kb on - strand, within CA264_13310 at 3106.402 kb on + strand, within CA264_13310 at 3106.402 kb on + strand, within CA264_13310 at 3106.417 kb on + strand, within CA264_13310 at 3106.462 kb on - strand at 3106.584 kb on - strand at 3106.659 kb on - strand at 3106.659 kb on - strand at 3106.664 kb on - strand at 3106.682 kb on + strand at 3106.683 kb on - strand at 3106.683 kb on - strand at 3106.697 kb on - strand at 3106.699 kb on - strand at 3106.734 kb on + strand at 3106.734 kb on + strand at 3106.735 kb on - strand at 3106.740 kb on - strand at 3106.809 kb on - strand at 3106.846 kb on + strand at 3106.858 kb on + strand at 3106.858 kb on + strand at 3106.859 kb on - strand at 3106.859 kb on - strand at 3106.859 kb on - strand at 3106.887 kb on - strand at 3106.899 kb on - strand at 3106.905 kb on + strand at 3106.905 kb on + strand at 3106.960 kb on + strand, within CA264_13315 at 3106.962 kb on + strand, within CA264_13315 at 3106.963 kb on - strand, within CA264_13315 at 3106.963 kb on - strand, within CA264_13315 at 3106.965 kb on - strand, within CA264_13315 at 3106.965 kb on - strand, within CA264_13315 at 3106.965 kb on - strand, within CA264_13315 at 3107.056 kb on + strand, within CA264_13315 at 3107.057 kb on - strand, within CA264_13315 at 3107.113 kb on + strand, within CA264_13315 at 3107.114 kb on - strand, within CA264_13315 at 3107.211 kb on - strand, within CA264_13315 at 3107.275 kb on - strand, within CA264_13315 at 3107.275 kb on - strand, within CA264_13315 at 3107.275 kb on - strand, within CA264_13315 at 3107.280 kb on + strand, within CA264_13315 at 3107.281 kb on - strand, within CA264_13315 at 3107.321 kb on + strand, within CA264_13315 at 3107.425 kb on + strand, within CA264_13315 at 3107.425 kb on + strand, within CA264_13315 at 3107.425 kb on + strand, within CA264_13315 at 3107.607 kb on - strand, within CA264_13315
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,103,365 - +0.3 3,103,371 - -0.4 3,103,371 - +0.5 3,103,373 - +0.2 3,103,373 - -0.6 3,103,373 - +0.3 3,103,375 - -0.5 3,103,389 + -0.1 3,103,430 + +1.0 3,103,476 - -0.5 3,103,544 + -0.4 3,103,544 + +0.5 3,103,600 + -2.7 3,103,600 + +1.2 3,103,618 - -0.4 3,103,634 + -0.2 3,103,681 + +0.5 3,103,727 - -0.9 3,103,752 + +0.3 3,103,756 - -0.8 3,103,756 - -1.5 3,103,760 + +0.1 3,103,765 + +1.9 3,103,770 + -0.5 3,103,770 + +0.3 3,103,788 + +0.9 3,103,788 + +0.3 3,103,988 + -0.0 3,104,025 + -0.3 3,104,031 + -1.1 3,104,032 - +0.0 3,104,032 - +0.5 3,104,200 + CA264_13310 0.13 +0.1 3,104,365 + CA264_13310 0.19 -0.3 3,104,395 - CA264_13310 0.20 +0.1 3,104,472 + CA264_13310 0.22 +0.2 3,104,558 + CA264_13310 0.25 +0.2 3,104,559 - CA264_13310 0.25 -0.2 3,104,560 + CA264_13310 0.25 -0.3 3,104,560 + CA264_13310 0.25 -0.7 3,104,561 - CA264_13310 0.25 +0.7 3,104,573 + CA264_13310 0.26 +0.6 3,104,618 + CA264_13310 0.27 -0.3 3,104,648 - CA264_13310 0.28 -0.4 3,104,649 + CA264_13310 0.29 +0.0 3,104,650 - CA264_13310 0.29 +1.1 3,104,690 + CA264_13310 0.30 -0.2 3,104,701 + CA264_13310 0.30 -0.8 3,104,702 - CA264_13310 0.30 -0.1 3,104,702 - CA264_13310 0.30 -0.6 3,104,702 - CA264_13310 0.30 -0.5 3,104,702 - CA264_13310 0.30 -0.4 3,104,703 + CA264_13310 0.30 -1.2 3,104,717 + CA264_13310 0.31 -1.2 3,104,771 + CA264_13310 0.33 -0.1 3,104,775 + CA264_13310 0.33 -0.1 3,104,775 + CA264_13310 0.33 -0.1 3,104,776 - CA264_13310 0.33 -0.4 3,104,776 - CA264_13310 0.33 -1.0 3,104,776 - CA264_13310 0.33 +0.5 3,104,776 - CA264_13310 0.33 -0.6 3,104,870 - CA264_13310 0.36 +0.3 3,104,884 - CA264_13310 0.37 +0.8 3,104,890 + CA264_13310 0.37 +0.1 3,104,893 - CA264_13310 0.37 -0.5 3,105,173 + CA264_13310 0.47 -0.8 3,105,271 + CA264_13310 0.50 +0.1 3,105,514 + CA264_13310 0.58 +0.0 3,105,658 + CA264_13310 0.63 +0.0 3,105,665 - CA264_13310 0.64 +0.1 3,105,667 + CA264_13310 0.64 -0.7 3,105,667 + CA264_13310 0.64 -0.0 3,105,668 - CA264_13310 0.64 -0.4 3,105,668 - CA264_13310 0.64 -0.1 3,105,668 - CA264_13310 0.64 +0.3 3,105,673 + CA264_13310 0.64 -0.1 3,105,673 + CA264_13310 0.64 -0.6 3,105,674 - CA264_13310 0.64 -0.5 3,105,716 + CA264_13310 0.65 +0.5 3,105,716 + CA264_13310 0.65 -0.3 3,105,716 + CA264_13310 0.65 +0.2 3,105,716 + CA264_13310 0.65 +0.5 3,105,716 + CA264_13310 0.65 +0.9 3,105,716 + CA264_13310 0.65 +0.5 3,105,716 + CA264_13310 0.65 -0.3 3,105,726 + CA264_13310 0.66 +0.1 3,105,804 + CA264_13310 0.68 -0.5 3,105,804 + CA264_13310 0.68 +0.2 3,105,944 - CA264_13310 0.73 -0.2 3,105,967 + CA264_13310 0.74 -0.3 3,105,967 + CA264_13310 0.74 +0.1 3,105,983 + CA264_13310 0.74 -0.2 3,105,994 + CA264_13310 0.75 +0.1 3,106,082 - CA264_13310 0.78 +0.0 3,106,082 - CA264_13310 0.78 +0.2 3,106,106 - CA264_13310 0.79 -0.3 3,106,174 + CA264_13310 0.81 -0.2 3,106,174 + CA264_13310 0.81 +0.2 3,106,204 + CA264_13310 0.82 -1.4 3,106,204 + CA264_13310 0.82 +0.6 3,106,261 + CA264_13310 0.84 -1.6 3,106,261 + CA264_13310 0.84 -0.9 3,106,261 + CA264_13310 0.84 +0.4 3,106,261 + CA264_13310 0.84 -0.3 3,106,262 - CA264_13310 0.84 +0.0 3,106,262 - CA264_13310 0.84 -0.0 3,106,402 + CA264_13310 0.89 +1.1 3,106,402 + CA264_13310 0.89 -0.7 3,106,417 + CA264_13310 0.89 +0.8 3,106,462 - -0.6 3,106,584 - -0.1 3,106,659 - +0.2 3,106,659 - -0.2 3,106,664 - +0.3 3,106,682 + -0.8 3,106,683 - +0.1 3,106,683 - -0.4 3,106,697 - +0.7 3,106,699 - -1.5 3,106,734 + -0.2 3,106,734 + -0.4 3,106,735 - -1.2 3,106,740 - -1.7 3,106,809 - -2.2 3,106,846 + -0.7 3,106,858 + -0.9 3,106,858 + -0.6 3,106,859 - -0.3 3,106,859 - -0.9 3,106,859 - -0.4 3,106,887 - -0.1 3,106,899 - -0.5 3,106,905 + -0.5 3,106,905 + -0.9 3,106,960 + CA264_13315 0.14 +0.1 3,106,962 + CA264_13315 0.15 -1.4 3,106,963 - CA264_13315 0.15 -1.1 3,106,963 - CA264_13315 0.15 -1.6 3,106,965 - CA264_13315 0.15 -0.5 3,106,965 - CA264_13315 0.15 -0.7 3,106,965 - CA264_13315 0.15 -0.4 3,107,056 + CA264_13315 0.23 +0.2 3,107,057 - CA264_13315 0.23 -0.8 3,107,113 + CA264_13315 0.28 -0.8 3,107,114 - CA264_13315 0.28 -0.1 3,107,211 - CA264_13315 0.36 -0.3 3,107,275 - CA264_13315 0.42 -0.1 3,107,275 - CA264_13315 0.42 -0.5 3,107,275 - CA264_13315 0.42 -1.3 3,107,280 + CA264_13315 0.42 -0.1 3,107,281 - CA264_13315 0.43 -0.9 3,107,321 + CA264_13315 0.46 -0.1 3,107,425 + CA264_13315 0.55 -1.0 3,107,425 + CA264_13315 0.55 -0.1 3,107,425 + CA264_13315 0.55 -2.2 3,107,607 - CA264_13315 0.71 -2.7
Or see this region's nucleotide sequence