Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12905 and CA264_12910 are separated by 282 nucleotides CA264_12910 and CA264_12915 are separated by 171 nucleotides
CA264_12905: CA264_12905 - SusC/RagA family TonB-linked outer membrane protein, at 3,006,857 to 3,009,820
_12905
CA264_12910: CA264_12910 - acyl-CoA-binding protein, at 3,010,103 to 3,010,357
_12910
CA264_12915: CA264_12915 - oligopeptidase B, at 3,010,529 to 3,012,727
_12915
Position (kb)
3010
3011 Strain fitness (log2 ratio)
-2
-1
0
1 at 3009.119 kb on + strand, within CA264_12905 at 3009.120 kb on - strand, within CA264_12905 at 3009.219 kb on + strand, within CA264_12905 at 3009.220 kb on - strand, within CA264_12905 at 3009.232 kb on + strand, within CA264_12905 at 3009.241 kb on + strand, within CA264_12905 at 3009.242 kb on - strand, within CA264_12905 at 3009.242 kb on - strand, within CA264_12905 at 3009.260 kb on + strand, within CA264_12905 at 3009.261 kb on - strand, within CA264_12905 at 3009.268 kb on - strand, within CA264_12905 at 3009.291 kb on - strand, within CA264_12905 at 3009.292 kb on + strand, within CA264_12905 at 3009.527 kb on + strand at 3009.582 kb on + strand at 3009.583 kb on - strand at 3009.637 kb on - strand at 3009.681 kb on - strand at 3009.687 kb on - strand at 3009.745 kb on + strand at 3009.746 kb on - strand at 3009.788 kb on + strand at 3009.811 kb on - strand at 3009.820 kb on + strand at 3009.841 kb on + strand at 3010.075 kb on + strand at 3010.101 kb on + strand at 3010.121 kb on + strand at 3010.122 kb on - strand at 3010.122 kb on - strand at 3010.126 kb on - strand at 3010.260 kb on + strand, within CA264_12910 at 3010.261 kb on - strand, within CA264_12910 at 3010.283 kb on + strand, within CA264_12910 at 3010.284 kb on - strand, within CA264_12910 at 3010.326 kb on - strand, within CA264_12910 at 3010.358 kb on - strand at 3010.365 kb on + strand at 3010.365 kb on + strand at 3010.366 kb on - strand at 3010.366 kb on - strand at 3010.366 kb on - strand at 3010.366 kb on - strand at 3010.366 kb on - strand at 3010.372 kb on + strand at 3010.373 kb on - strand at 3010.373 kb on - strand at 3010.464 kb on + strand at 3010.465 kb on - strand at 3010.498 kb on - strand at 3010.498 kb on - strand at 3010.505 kb on + strand at 3010.506 kb on - strand at 3010.748 kb on + strand at 3010.748 kb on + strand at 3010.748 kb on + strand at 3010.748 kb on + strand at 3010.748 kb on + strand at 3010.749 kb on - strand, within CA264_12915 at 3010.790 kb on + strand, within CA264_12915 at 3010.811 kb on + strand, within CA264_12915 at 3010.811 kb on + strand, within CA264_12915 at 3010.881 kb on + strand, within CA264_12915 at 3010.882 kb on - strand, within CA264_12915 at 3010.907 kb on + strand, within CA264_12915 at 3010.907 kb on + strand, within CA264_12915 at 3010.908 kb on - strand, within CA264_12915 at 3010.932 kb on - strand, within CA264_12915 at 3011.045 kb on + strand, within CA264_12915 at 3011.127 kb on - strand, within CA264_12915 at 3011.127 kb on - strand, within CA264_12915 at 3011.231 kb on + strand, within CA264_12915 at 3011.232 kb on - strand, within CA264_12915 at 3011.261 kb on + strand, within CA264_12915 at 3011.261 kb on + strand, within CA264_12915 at 3011.269 kb on - strand, within CA264_12915 at 3011.272 kb on + strand, within CA264_12915 at 3011.272 kb on + strand, within CA264_12915 at 3011.273 kb on - strand, within CA264_12915 at 3011.346 kb on - strand, within CA264_12915 at 3011.352 kb on - strand, within CA264_12915
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,009,119 + CA264_12905 0.76 -0.4 3,009,120 - CA264_12905 0.76 +0.2 3,009,219 + CA264_12905 0.80 +0.1 3,009,220 - CA264_12905 0.80 -0.3 3,009,232 + CA264_12905 0.80 -0.2 3,009,241 + CA264_12905 0.80 -0.5 3,009,242 - CA264_12905 0.80 -1.1 3,009,242 - CA264_12905 0.80 +0.0 3,009,260 + CA264_12905 0.81 -0.3 3,009,261 - CA264_12905 0.81 +0.6 3,009,268 - CA264_12905 0.81 -0.9 3,009,291 - CA264_12905 0.82 +0.1 3,009,292 + CA264_12905 0.82 -0.9 3,009,527 + +0.2 3,009,582 + +1.4 3,009,583 - +0.5 3,009,637 - -0.7 3,009,681 - -0.5 3,009,687 - +0.5 3,009,745 + -0.7 3,009,746 - -0.3 3,009,788 + +0.1 3,009,811 - +1.5 3,009,820 + -2.4 3,009,841 + -0.1 3,010,075 + -1.1 3,010,101 + -1.9 3,010,121 + -0.7 3,010,122 - +0.4 3,010,122 - -0.6 3,010,126 - +0.2 3,010,260 + CA264_12910 0.62 -0.6 3,010,261 - CA264_12910 0.62 -0.2 3,010,283 + CA264_12910 0.71 -1.1 3,010,284 - CA264_12910 0.71 -1.4 3,010,326 - CA264_12910 0.87 +1.2 3,010,358 - -1.3 3,010,365 + -0.1 3,010,365 + -0.3 3,010,366 - -0.4 3,010,366 - +0.3 3,010,366 - -0.5 3,010,366 - +0.9 3,010,366 - +1.1 3,010,372 + -0.5 3,010,373 - +0.1 3,010,373 - -0.2 3,010,464 + -0.1 3,010,465 - +0.0 3,010,498 - -0.6 3,010,498 - -0.3 3,010,505 + -0.1 3,010,506 - -0.1 3,010,748 + -0.6 3,010,748 + +1.5 3,010,748 + +1.1 3,010,748 + -1.5 3,010,748 + +0.2 3,010,749 - CA264_12915 0.10 +0.8 3,010,790 + CA264_12915 0.12 +1.2 3,010,811 + CA264_12915 0.13 +0.5 3,010,811 + CA264_12915 0.13 +0.1 3,010,881 + CA264_12915 0.16 +0.1 3,010,882 - CA264_12915 0.16 -0.2 3,010,907 + CA264_12915 0.17 -0.6 3,010,907 + CA264_12915 0.17 +0.3 3,010,908 - CA264_12915 0.17 +0.2 3,010,932 - CA264_12915 0.18 -0.3 3,011,045 + CA264_12915 0.23 +1.0 3,011,127 - CA264_12915 0.27 +0.5 3,011,127 - CA264_12915 0.27 -0.6 3,011,231 + CA264_12915 0.32 -0.2 3,011,232 - CA264_12915 0.32 -0.3 3,011,261 + CA264_12915 0.33 +0.5 3,011,261 + CA264_12915 0.33 -0.7 3,011,269 - CA264_12915 0.34 +0.9 3,011,272 + CA264_12915 0.34 -0.2 3,011,272 + CA264_12915 0.34 +0.3 3,011,273 - CA264_12915 0.34 -0.1 3,011,346 - CA264_12915 0.37 -0.6 3,011,352 - CA264_12915 0.37 -0.3
Or see this region's nucleotide sequence