Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12460 and CA264_12465 are separated by 14 nucleotides CA264_12465 and CA264_12470 are separated by 80 nucleotides
CA264_12460: CA264_12460 - aminotransferase DegT, at 2,900,791 to 2,901,948
_12460
CA264_12465: CA264_12465 - NAD-dependent dehydratase, at 2,901,963 to 2,902,961
_12465
CA264_12470: CA264_12470 - UDP-N-acetyl-D-galactosamine dehydrogenase, at 2,903,042 to 2,904,346
_12470
Position (kb)
2901
2902
2903 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2901.065 kb on + strand, within CA264_12460 at 2901.087 kb on + strand, within CA264_12460 at 2901.102 kb on + strand, within CA264_12460 at 2901.106 kb on + strand, within CA264_12460 at 2901.106 kb on + strand, within CA264_12460 at 2901.143 kb on - strand, within CA264_12460 at 2901.162 kb on + strand, within CA264_12460 at 2901.165 kb on - strand, within CA264_12460 at 2901.184 kb on - strand, within CA264_12460 at 2901.237 kb on + strand, within CA264_12460 at 2901.237 kb on + strand, within CA264_12460 at 2901.238 kb on - strand, within CA264_12460 at 2901.238 kb on - strand, within CA264_12460 at 2901.243 kb on + strand, within CA264_12460 at 2901.243 kb on + strand, within CA264_12460 at 2901.243 kb on + strand, within CA264_12460 at 2901.259 kb on + strand, within CA264_12460 at 2901.260 kb on - strand, within CA264_12460 at 2901.262 kb on + strand, within CA264_12460 at 2901.262 kb on + strand, within CA264_12460 at 2901.294 kb on + strand, within CA264_12460 at 2901.309 kb on + strand, within CA264_12460 at 2901.320 kb on - strand, within CA264_12460 at 2901.322 kb on + strand, within CA264_12460 at 2901.322 kb on + strand, within CA264_12460 at 2901.323 kb on - strand, within CA264_12460 at 2901.333 kb on + strand, within CA264_12460 at 2901.345 kb on + strand, within CA264_12460 at 2901.346 kb on - strand, within CA264_12460 at 2901.346 kb on - strand, within CA264_12460 at 2901.348 kb on + strand, within CA264_12460 at 2901.396 kb on + strand, within CA264_12460 at 2901.547 kb on + strand, within CA264_12460 at 2901.547 kb on + strand, within CA264_12460 at 2901.569 kb on - strand, within CA264_12460 at 2901.589 kb on + strand, within CA264_12460 at 2901.614 kb on + strand, within CA264_12460 at 2901.614 kb on + strand, within CA264_12460 at 2901.621 kb on + strand, within CA264_12460 at 2901.622 kb on - strand, within CA264_12460 at 2901.622 kb on - strand, within CA264_12460 at 2901.640 kb on - strand, within CA264_12460 at 2901.661 kb on - strand, within CA264_12460 at 2901.693 kb on + strand, within CA264_12460 at 2901.693 kb on + strand, within CA264_12460 at 2901.694 kb on - strand, within CA264_12460 at 2901.740 kb on + strand, within CA264_12460 at 2901.745 kb on - strand, within CA264_12460 at 2901.788 kb on + strand, within CA264_12460 at 2901.788 kb on + strand, within CA264_12460 at 2901.789 kb on - strand, within CA264_12460 at 2901.789 kb on - strand, within CA264_12460 at 2901.810 kb on - strand, within CA264_12460 at 2901.810 kb on - strand, within CA264_12460 at 2901.810 kb on - strand, within CA264_12460 at 2901.821 kb on - strand, within CA264_12460 at 2901.910 kb on - strand at 2901.930 kb on - strand at 2901.930 kb on - strand at 2901.933 kb on + strand at 2901.948 kb on + strand at 2901.952 kb on - strand at 2901.952 kb on - strand at 2901.952 kb on - strand at 2901.952 kb on - strand at 2901.955 kb on - strand at 2901.955 kb on - strand at 2901.959 kb on + strand at 2901.960 kb on - strand at 2901.973 kb on + strand at 2901.973 kb on + strand at 2902.103 kb on - strand, within CA264_12465 at 2902.104 kb on + strand, within CA264_12465 at 2902.104 kb on + strand at 2902.113 kb on + strand, within CA264_12465 at 2902.155 kb on + strand, within CA264_12465 at 2902.181 kb on + strand, within CA264_12465 at 2902.197 kb on + strand, within CA264_12465 at 2902.232 kb on + strand, within CA264_12465 at 2902.292 kb on + strand, within CA264_12465 at 2902.292 kb on + strand, within CA264_12465 at 2902.293 kb on - strand at 2902.293 kb on - strand, within CA264_12465 at 2902.320 kb on - strand, within CA264_12465 at 2902.325 kb on + strand, within CA264_12465 at 2902.362 kb on + strand, within CA264_12465 at 2902.363 kb on - strand, within CA264_12465 at 2902.375 kb on - strand, within CA264_12465 at 2902.375 kb on - strand, within CA264_12465 at 2902.383 kb on + strand, within CA264_12465 at 2902.384 kb on - strand, within CA264_12465 at 2902.418 kb on + strand, within CA264_12465 at 2902.418 kb on + strand, within CA264_12465 at 2902.431 kb on + strand, within CA264_12465 at 2902.432 kb on - strand at 2902.580 kb on + strand, within CA264_12465 at 2902.602 kb on + strand, within CA264_12465 at 2902.602 kb on + strand, within CA264_12465 at 2902.603 kb on - strand, within CA264_12465 at 2902.655 kb on + strand, within CA264_12465 at 2902.663 kb on + strand, within CA264_12465 at 2902.681 kb on + strand, within CA264_12465 at 2902.681 kb on + strand, within CA264_12465 at 2902.681 kb on + strand, within CA264_12465 at 2902.682 kb on - strand, within CA264_12465 at 2902.745 kb on + strand, within CA264_12465 at 2902.746 kb on - strand, within CA264_12465 at 2902.746 kb on - strand, within CA264_12465 at 2902.746 kb on - strand, within CA264_12465 at 2902.818 kb on - strand, within CA264_12465 at 2902.818 kb on - strand, within CA264_12465 at 2902.822 kb on - strand, within CA264_12465 at 2902.835 kb on + strand, within CA264_12465 at 2902.839 kb on - strand, within CA264_12465 at 2902.850 kb on - strand, within CA264_12465 at 2902.897 kb on - strand at 2902.962 kb on - strand at 2902.962 kb on - strand at 2903.025 kb on + strand at 2903.091 kb on + strand at 2903.091 kb on + strand at 2903.091 kb on + strand at 2903.092 kb on - strand at 2903.092 kb on - strand at 2903.147 kb on - strand at 2903.147 kb on - strand at 2903.218 kb on - strand, within CA264_12470 at 2903.256 kb on + strand, within CA264_12470 at 2903.257 kb on - strand, within CA264_12470 at 2903.278 kb on - strand, within CA264_12470 at 2903.307 kb on - strand, within CA264_12470 at 2903.307 kb on - strand, within CA264_12470 at 2903.307 kb on - strand, within CA264_12470 at 2903.315 kb on - strand, within CA264_12470 at 2903.321 kb on + strand, within CA264_12470 at 2903.321 kb on + strand, within CA264_12470 at 2903.322 kb on - strand, within CA264_12470 at 2903.341 kb on + strand, within CA264_12470 at 2903.348 kb on - strand, within CA264_12470 at 2903.428 kb on - strand, within CA264_12470 at 2903.428 kb on - strand, within CA264_12470 at 2903.465 kb on + strand, within CA264_12470 at 2903.465 kb on + strand, within CA264_12470 at 2903.466 kb on - strand, within CA264_12470 at 2903.466 kb on - strand, within CA264_12470 at 2903.486 kb on + strand, within CA264_12470 at 2903.487 kb on - strand, within CA264_12470 at 2903.512 kb on - strand, within CA264_12470 at 2903.515 kb on - strand, within CA264_12470 at 2903.594 kb on + strand, within CA264_12470 at 2903.595 kb on - strand, within CA264_12470 at 2903.595 kb on - strand, within CA264_12470 at 2903.636 kb on - strand, within CA264_12470 at 2903.648 kb on + strand, within CA264_12470 at 2903.648 kb on + strand, within CA264_12470 at 2903.649 kb on - strand, within CA264_12470 at 2903.741 kb on - strand, within CA264_12470 at 2903.753 kb on - strand, within CA264_12470 at 2903.754 kb on + strand, within CA264_12470 at 2903.765 kb on + strand, within CA264_12470 at 2903.765 kb on + strand, within CA264_12470 at 2903.770 kb on + strand, within CA264_12470 at 2903.800 kb on + strand, within CA264_12470 at 2903.824 kb on + strand, within CA264_12470 at 2903.824 kb on + strand, within CA264_12470 at 2903.824 kb on + strand, within CA264_12470 at 2903.824 kb on + strand, within CA264_12470 at 2903.825 kb on - strand, within CA264_12470 at 2903.849 kb on - strand, within CA264_12470 at 2903.949 kb on - strand, within CA264_12470 at 2903.949 kb on - strand, within CA264_12470 at 2903.961 kb on + strand, within CA264_12470 at 2903.961 kb on + strand, within CA264_12470
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,901,065 + CA264_12460 0.24 -1.8 2,901,087 + CA264_12460 0.26 +0.7 2,901,102 + CA264_12460 0.27 +0.3 2,901,106 + CA264_12460 0.27 -0.5 2,901,106 + CA264_12460 0.27 -0.5 2,901,143 - CA264_12460 0.30 +0.5 2,901,162 + CA264_12460 0.32 -0.3 2,901,165 - CA264_12460 0.32 -2.8 2,901,184 - CA264_12460 0.34 -0.5 2,901,237 + CA264_12460 0.39 -1.1 2,901,237 + CA264_12460 0.39 +0.0 2,901,238 - CA264_12460 0.39 -0.4 2,901,238 - CA264_12460 0.39 +0.1 2,901,243 + CA264_12460 0.39 +0.9 2,901,243 + CA264_12460 0.39 +0.2 2,901,243 + CA264_12460 0.39 +0.6 2,901,259 + CA264_12460 0.40 +0.7 2,901,260 - CA264_12460 0.41 -0.0 2,901,262 + CA264_12460 0.41 -1.1 2,901,262 + CA264_12460 0.41 +0.2 2,901,294 + CA264_12460 0.43 -0.3 2,901,309 + CA264_12460 0.45 +0.3 2,901,320 - CA264_12460 0.46 -1.7 2,901,322 + CA264_12460 0.46 -0.5 2,901,322 + CA264_12460 0.46 -0.1 2,901,323 - CA264_12460 0.46 -0.3 2,901,333 + CA264_12460 0.47 +0.1 2,901,345 + CA264_12460 0.48 +0.7 2,901,346 - CA264_12460 0.48 -1.2 2,901,346 - CA264_12460 0.48 -1.5 2,901,348 + CA264_12460 0.48 +1.3 2,901,396 + CA264_12460 0.52 +0.2 2,901,547 + CA264_12460 0.65 +0.5 2,901,547 + CA264_12460 0.65 +1.0 2,901,569 - CA264_12460 0.67 -0.3 2,901,589 + CA264_12460 0.69 +0.8 2,901,614 + CA264_12460 0.71 +0.7 2,901,614 + CA264_12460 0.71 -0.1 2,901,621 + CA264_12460 0.72 +0.3 2,901,622 - CA264_12460 0.72 -0.3 2,901,622 - CA264_12460 0.72 -0.5 2,901,640 - CA264_12460 0.73 +0.2 2,901,661 - CA264_12460 0.75 -1.0 2,901,693 + CA264_12460 0.78 +1.0 2,901,693 + CA264_12460 0.78 -0.2 2,901,694 - CA264_12460 0.78 -0.3 2,901,740 + CA264_12460 0.82 +0.1 2,901,745 - CA264_12460 0.82 -0.2 2,901,788 + CA264_12460 0.86 -1.0 2,901,788 + CA264_12460 0.86 +0.3 2,901,789 - CA264_12460 0.86 -0.3 2,901,789 - CA264_12460 0.86 +0.8 2,901,810 - CA264_12460 0.88 -0.8 2,901,810 - CA264_12460 0.88 +0.0 2,901,810 - CA264_12460 0.88 -0.4 2,901,821 - CA264_12460 0.89 +0.3 2,901,910 - +0.7 2,901,930 - -0.4 2,901,930 - -0.3 2,901,933 + -0.3 2,901,948 + +0.2 2,901,952 - -0.3 2,901,952 - +1.6 2,901,952 - -1.5 2,901,952 - -0.1 2,901,955 - +0.4 2,901,955 - +0.0 2,901,959 + -0.7 2,901,960 - -0.8 2,901,973 + +2.2 2,901,973 + -2.4 2,902,103 - CA264_12465 0.14 -2.3 2,902,104 + CA264_12465 0.14 -0.4 2,902,104 + +0.2 2,902,113 + CA264_12465 0.15 -1.3 2,902,155 + CA264_12465 0.19 -1.7 2,902,181 + CA264_12465 0.22 -0.5 2,902,197 + CA264_12465 0.23 +1.4 2,902,232 + CA264_12465 0.27 -0.8 2,902,292 + CA264_12465 0.33 +0.1 2,902,292 + CA264_12465 0.33 +1.2 2,902,293 - -0.3 2,902,293 - CA264_12465 0.33 -0.8 2,902,320 - CA264_12465 0.36 -1.2 2,902,325 + CA264_12465 0.36 -0.1 2,902,362 + CA264_12465 0.40 -0.5 2,902,363 - CA264_12465 0.40 -0.5 2,902,375 - CA264_12465 0.41 -1.3 2,902,375 - CA264_12465 0.41 +0.5 2,902,383 + CA264_12465 0.42 +1.5 2,902,384 - CA264_12465 0.42 -1.3 2,902,418 + CA264_12465 0.46 -1.3 2,902,418 + CA264_12465 0.46 +0.1 2,902,431 + CA264_12465 0.47 -1.6 2,902,432 - +4.2 2,902,580 + CA264_12465 0.62 -1.2 2,902,602 + CA264_12465 0.64 -0.5 2,902,602 + CA264_12465 0.64 +0.1 2,902,603 - CA264_12465 0.64 -0.9 2,902,655 + CA264_12465 0.69 -1.2 2,902,663 + CA264_12465 0.70 -0.7 2,902,681 + CA264_12465 0.72 -1.7 2,902,681 + CA264_12465 0.72 -1.4 2,902,681 + CA264_12465 0.72 -0.6 2,902,682 - CA264_12465 0.72 -2.2 2,902,745 + CA264_12465 0.78 -1.9 2,902,746 - CA264_12465 0.78 +0.2 2,902,746 - CA264_12465 0.78 +1.9 2,902,746 - CA264_12465 0.78 -1.1 2,902,818 - CA264_12465 0.86 -0.5 2,902,818 - CA264_12465 0.86 -1.7 2,902,822 - CA264_12465 0.86 -0.8 2,902,835 + CA264_12465 0.87 +0.8 2,902,839 - CA264_12465 0.88 -2.9 2,902,850 - CA264_12465 0.89 -0.4 2,902,897 - -2.6 2,902,962 - -0.4 2,902,962 - +0.1 2,903,025 + -0.2 2,903,091 + -1.1 2,903,091 + +0.2 2,903,091 + +0.1 2,903,092 - -0.6 2,903,092 - -0.4 2,903,147 - +0.0 2,903,147 - +2.2 2,903,218 - CA264_12470 0.13 -0.1 2,903,256 + CA264_12470 0.16 +0.5 2,903,257 - CA264_12470 0.16 -0.6 2,903,278 - CA264_12470 0.18 -0.3 2,903,307 - CA264_12470 0.20 -0.4 2,903,307 - CA264_12470 0.20 -0.7 2,903,307 - CA264_12470 0.20 -0.2 2,903,315 - CA264_12470 0.21 +0.1 2,903,321 + CA264_12470 0.21 +0.4 2,903,321 + CA264_12470 0.21 -0.1 2,903,322 - CA264_12470 0.21 -0.1 2,903,341 + CA264_12470 0.23 +0.2 2,903,348 - CA264_12470 0.23 -0.1 2,903,428 - CA264_12470 0.30 -0.7 2,903,428 - CA264_12470 0.30 +0.7 2,903,465 + CA264_12470 0.32 -0.8 2,903,465 + CA264_12470 0.32 -0.6 2,903,466 - CA264_12470 0.32 -1.1 2,903,466 - CA264_12470 0.32 -0.8 2,903,486 + CA264_12470 0.34 -0.7 2,903,487 - CA264_12470 0.34 -0.1 2,903,512 - CA264_12470 0.36 -0.1 2,903,515 - CA264_12470 0.36 +0.2 2,903,594 + CA264_12470 0.42 -1.5 2,903,595 - CA264_12470 0.42 +1.7 2,903,595 - CA264_12470 0.42 +0.7 2,903,636 - CA264_12470 0.46 +0.5 2,903,648 + CA264_12470 0.46 +1.0 2,903,648 + CA264_12470 0.46 +0.3 2,903,649 - CA264_12470 0.47 -1.2 2,903,741 - CA264_12470 0.54 +0.9 2,903,753 - CA264_12470 0.54 +0.9 2,903,754 + CA264_12470 0.55 -0.5 2,903,765 + CA264_12470 0.55 +0.5 2,903,765 + CA264_12470 0.55 +0.2 2,903,770 + CA264_12470 0.56 +0.1 2,903,800 + CA264_12470 0.58 +1.1 2,903,824 + CA264_12470 0.60 +0.8 2,903,824 + CA264_12470 0.60 +0.7 2,903,824 + CA264_12470 0.60 -0.0 2,903,824 + CA264_12470 0.60 -0.6 2,903,825 - CA264_12470 0.60 -0.2 2,903,849 - CA264_12470 0.62 -2.4 2,903,949 - CA264_12470 0.70 -0.7 2,903,949 - CA264_12470 0.70 +0.4 2,903,961 + CA264_12470 0.70 +0.7 2,903,961 + CA264_12470 0.70 +0.1
Or see this region's nucleotide sequence