Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12125 and CA264_12130 are separated by 35 nucleotides CA264_12130 and CA264_12135 are separated by 4 nucleotides
CA264_12125: CA264_12125 - glycosyl transferase family 1, at 2,827,606 to 2,828,676
_12125
CA264_12130: CA264_12130 - oxidoreductase, at 2,828,712 to 2,829,758
_12130
CA264_12135: CA264_12135 - L-iditol 2-dehydrogenase, at 2,829,763 to 2,830,716
_12135
Position (kb)
2828
2829
2830 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2827.790 kb on + strand, within CA264_12125 at 2827.790 kb on + strand, within CA264_12125 at 2827.790 kb on + strand, within CA264_12125 at 2827.895 kb on + strand, within CA264_12125 at 2827.895 kb on + strand, within CA264_12125 at 2828.033 kb on + strand, within CA264_12125 at 2828.033 kb on + strand, within CA264_12125 at 2828.035 kb on + strand, within CA264_12125 at 2828.168 kb on + strand, within CA264_12125 at 2828.198 kb on + strand, within CA264_12125 at 2828.286 kb on - strand, within CA264_12125 at 2828.286 kb on - strand, within CA264_12125 at 2828.428 kb on + strand, within CA264_12125 at 2828.507 kb on + strand, within CA264_12125 at 2828.626 kb on + strand at 2828.707 kb on - strand at 2828.707 kb on - strand at 2828.745 kb on + strand at 2829.000 kb on + strand, within CA264_12130 at 2829.001 kb on - strand, within CA264_12130 at 2829.046 kb on + strand, within CA264_12130 at 2829.071 kb on + strand, within CA264_12130 at 2829.075 kb on - strand, within CA264_12130 at 2829.262 kb on + strand, within CA264_12130 at 2829.262 kb on + strand, within CA264_12130 at 2829.298 kb on + strand, within CA264_12130 at 2829.299 kb on - strand, within CA264_12130 at 2829.607 kb on + strand, within CA264_12130 at 2829.669 kb on + strand at 2829.772 kb on + strand at 2829.858 kb on - strand at 2829.910 kb on + strand, within CA264_12135 at 2829.919 kb on - strand, within CA264_12135 at 2829.919 kb on - strand, within CA264_12135 at 2830.300 kb on + strand, within CA264_12135 at 2830.455 kb on - strand, within CA264_12135
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,827,790 + CA264_12125 0.17 -0.9 2,827,790 + CA264_12125 0.17 -0.2 2,827,790 + CA264_12125 0.17 -1.1 2,827,895 + CA264_12125 0.27 -1.9 2,827,895 + CA264_12125 0.27 -1.7 2,828,033 + CA264_12125 0.40 -2.2 2,828,033 + CA264_12125 0.40 -1.5 2,828,035 + CA264_12125 0.40 -1.6 2,828,168 + CA264_12125 0.52 -1.5 2,828,198 + CA264_12125 0.55 -0.7 2,828,286 - CA264_12125 0.63 -1.8 2,828,286 - CA264_12125 0.63 -2.9 2,828,428 + CA264_12125 0.77 -0.8 2,828,507 + CA264_12125 0.84 -1.2 2,828,626 + -0.8 2,828,707 - -1.9 2,828,707 - -3.3 2,828,745 + -1.7 2,829,000 + CA264_12130 0.28 -0.1 2,829,001 - CA264_12130 0.28 -1.8 2,829,046 + CA264_12130 0.32 +0.4 2,829,071 + CA264_12130 0.34 -1.7 2,829,075 - CA264_12130 0.35 -2.6 2,829,262 + CA264_12130 0.53 -1.6 2,829,262 + CA264_12130 0.53 -0.6 2,829,298 + CA264_12130 0.56 -1.4 2,829,299 - CA264_12130 0.56 -2.5 2,829,607 + CA264_12130 0.85 -2.0 2,829,669 + -2.2 2,829,772 + -0.8 2,829,858 - -2.4 2,829,910 + CA264_12135 0.15 -1.0 2,829,919 - CA264_12135 0.16 -2.7 2,829,919 - CA264_12135 0.16 -4.3 2,830,300 + CA264_12135 0.56 -1.0 2,830,455 - CA264_12135 0.73 -1.7
Or see this region's nucleotide sequence