Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12115 and CA264_12120 overlap by 11 nucleotides CA264_12120 and CA264_12125 are separated by 248 nucleotides
CA264_12115: CA264_12115 - hypothetical protein, at 2,825,119 to 2,826,225
_12115
CA264_12120: CA264_12120 - glycosyltransferase, at 2,826,215 to 2,827,357
_12120
CA264_12125: CA264_12125 - glycosyl transferase family 1, at 2,827,606 to 2,828,676
_12125
Position (kb)
2826
2827
2828 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2825.306 kb on - strand, within CA264_12115 at 2825.443 kb on - strand, within CA264_12115 at 2825.484 kb on + strand, within CA264_12115 at 2825.484 kb on + strand, within CA264_12115 at 2825.485 kb on - strand, within CA264_12115 at 2825.487 kb on + strand, within CA264_12115 at 2825.487 kb on + strand, within CA264_12115 at 2825.487 kb on + strand, within CA264_12115 at 2825.489 kb on + strand, within CA264_12115 at 2825.509 kb on - strand, within CA264_12115 at 2825.509 kb on - strand, within CA264_12115 at 2825.712 kb on - strand, within CA264_12115 at 2825.755 kb on + strand, within CA264_12115 at 2825.795 kb on + strand, within CA264_12115 at 2825.960 kb on - strand, within CA264_12115 at 2825.997 kb on + strand, within CA264_12115 at 2826.031 kb on + strand, within CA264_12115 at 2826.080 kb on + strand, within CA264_12115 at 2826.133 kb on + strand at 2826.146 kb on + strand at 2826.147 kb on - strand at 2826.147 kb on - strand at 2826.147 kb on - strand at 2826.147 kb on - strand at 2826.269 kb on + strand at 2826.269 kb on + strand at 2826.345 kb on - strand, within CA264_12120 at 2826.559 kb on - strand, within CA264_12120 at 2826.590 kb on - strand, within CA264_12120 at 2826.591 kb on + strand, within CA264_12120 at 2826.592 kb on - strand, within CA264_12120 at 2826.622 kb on + strand, within CA264_12120 at 2826.897 kb on - strand, within CA264_12120 at 2827.013 kb on - strand, within CA264_12120 at 2827.014 kb on + strand, within CA264_12120 at 2827.015 kb on - strand, within CA264_12120 at 2827.242 kb on + strand, within CA264_12120 at 2827.330 kb on + strand at 2827.330 kb on + strand at 2827.358 kb on - strand at 2827.397 kb on - strand at 2827.509 kb on + strand at 2827.790 kb on + strand, within CA264_12125 at 2827.790 kb on + strand, within CA264_12125 at 2827.790 kb on + strand, within CA264_12125 at 2827.895 kb on + strand, within CA264_12125 at 2827.895 kb on + strand, within CA264_12125 at 2828.033 kb on + strand, within CA264_12125 at 2828.033 kb on + strand, within CA264_12125 at 2828.035 kb on + strand, within CA264_12125 at 2828.168 kb on + strand, within CA264_12125 at 2828.198 kb on + strand, within CA264_12125 at 2828.286 kb on - strand, within CA264_12125 at 2828.286 kb on - strand, within CA264_12125
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,825,306 - CA264_12115 0.17 -1.4 2,825,443 - CA264_12115 0.29 +0.6 2,825,484 + CA264_12115 0.33 -0.9 2,825,484 + CA264_12115 0.33 -0.1 2,825,485 - CA264_12115 0.33 -2.5 2,825,487 + CA264_12115 0.33 -0.9 2,825,487 + CA264_12115 0.33 -0.3 2,825,487 + CA264_12115 0.33 -1.4 2,825,489 + CA264_12115 0.33 -1.3 2,825,509 - CA264_12115 0.35 -1.7 2,825,509 - CA264_12115 0.35 -1.2 2,825,712 - CA264_12115 0.54 -1.6 2,825,755 + CA264_12115 0.57 -1.5 2,825,795 + CA264_12115 0.61 -1.3 2,825,960 - CA264_12115 0.76 -1.7 2,825,997 + CA264_12115 0.79 -1.5 2,826,031 + CA264_12115 0.82 -1.0 2,826,080 + CA264_12115 0.87 -1.6 2,826,133 + -1.5 2,826,146 + +0.2 2,826,147 - -3.2 2,826,147 - -0.9 2,826,147 - -1.6 2,826,147 - -2.7 2,826,269 + -1.9 2,826,269 + -0.6 2,826,345 - CA264_12120 0.11 -1.9 2,826,559 - CA264_12120 0.30 -1.5 2,826,590 - CA264_12120 0.33 -2.6 2,826,591 + CA264_12120 0.33 +0.2 2,826,592 - CA264_12120 0.33 -0.4 2,826,622 + CA264_12120 0.36 -2.1 2,826,897 - CA264_12120 0.60 -2.4 2,827,013 - CA264_12120 0.70 -0.7 2,827,014 + CA264_12120 0.70 +0.2 2,827,015 - CA264_12120 0.70 -1.9 2,827,242 + CA264_12120 0.90 -0.0 2,827,330 + -0.6 2,827,330 + +0.9 2,827,358 - -1.1 2,827,397 - -1.7 2,827,509 + -1.7 2,827,790 + CA264_12125 0.17 -0.9 2,827,790 + CA264_12125 0.17 -0.2 2,827,790 + CA264_12125 0.17 -1.1 2,827,895 + CA264_12125 0.27 -1.9 2,827,895 + CA264_12125 0.27 -1.7 2,828,033 + CA264_12125 0.40 -2.2 2,828,033 + CA264_12125 0.40 -1.5 2,828,035 + CA264_12125 0.40 -1.6 2,828,168 + CA264_12125 0.52 -1.5 2,828,198 + CA264_12125 0.55 -0.7 2,828,286 - CA264_12125 0.63 -1.8 2,828,286 - CA264_12125 0.63 -2.9
Or see this region's nucleotide sequence