Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11920 and CA264_11925 are separated by 88 nucleotides CA264_11925 and CA264_11930 are separated by 14 nucleotides CA264_11930 and CA264_11935 are separated by 369 nucleotides
CA264_11920: CA264_11920 - DNA polymerase III subunit epsilon, at 2,771,554 to 2,772,360
_11920
CA264_11925: CA264_11925 - hypothetical protein, at 2,772,449 to 2,773,078
_11925
CA264_11930: CA264_11930 - peptidase M48, at 2,773,093 to 2,773,890
_11930
CA264_11935: CA264_11935 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, at 2,774,260 to 2,774,871
_11935
Position (kb)
2773
2774 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2772.103 kb on - strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.126 kb on + strand, within CA264_11920 at 2772.188 kb on - strand, within CA264_11920 at 2772.189 kb on + strand, within CA264_11920 at 2772.193 kb on - strand, within CA264_11920 at 2772.227 kb on - strand, within CA264_11920 at 2772.229 kb on - strand, within CA264_11920 at 2772.271 kb on + strand, within CA264_11920 at 2772.308 kb on - strand at 2772.400 kb on + strand at 2772.400 kb on + strand at 2772.428 kb on + strand at 2772.428 kb on + strand at 2772.428 kb on + strand at 2772.437 kb on + strand at 2772.438 kb on - strand at 2772.601 kb on + strand, within CA264_11925 at 2772.866 kb on - strand, within CA264_11925 at 2772.866 kb on - strand, within CA264_11925 at 2772.866 kb on - strand, within CA264_11925 at 2772.867 kb on + strand, within CA264_11925 at 2772.867 kb on + strand, within CA264_11925 at 2772.867 kb on + strand, within CA264_11925 at 2773.017 kb on + strand at 2773.017 kb on + strand at 2773.036 kb on + strand at 2773.094 kb on + strand at 2773.106 kb on + strand at 2773.107 kb on - strand at 2773.107 kb on - strand at 2773.107 kb on - strand at 2773.321 kb on + strand, within CA264_11930 at 2773.543 kb on - strand, within CA264_11930 at 2773.543 kb on - strand, within CA264_11930 at 2773.544 kb on + strand, within CA264_11930 at 2773.545 kb on - strand, within CA264_11930 at 2773.547 kb on - strand, within CA264_11930 at 2773.547 kb on - strand, within CA264_11930 at 2773.557 kb on + strand, within CA264_11930 at 2773.659 kb on - strand, within CA264_11930 at 2773.867 kb on - strand at 2773.886 kb on + strand at 2773.887 kb on - strand at 2773.887 kb on - strand at 2773.962 kb on + strand at 2773.962 kb on + strand at 2773.963 kb on - strand at 2773.964 kb on + strand at 2773.973 kb on - strand at 2773.977 kb on + strand at 2773.982 kb on + strand at 2773.986 kb on + strand at 2773.986 kb on + strand at 2773.987 kb on - strand at 2773.991 kb on - strand at 2773.991 kb on - strand at 2773.991 kb on - strand at 2773.994 kb on + strand at 2773.994 kb on + strand at 2773.994 kb on + strand at 2773.995 kb on - strand at 2773.995 kb on - strand at 2774.005 kb on + strand at 2774.005 kb on + strand at 2774.005 kb on + strand at 2774.006 kb on - strand at 2774.063 kb on + strand at 2774.079 kb on + strand at 2774.088 kb on - strand at 2774.088 kb on - strand at 2774.108 kb on + strand at 2774.108 kb on + strand at 2774.109 kb on - strand at 2774.109 kb on - strand at 2774.109 kb on - strand at 2774.114 kb on + strand at 2774.229 kb on - strand at 2774.287 kb on + strand at 2774.310 kb on + strand at 2774.311 kb on - strand at 2774.311 kb on - strand at 2774.708 kb on - strand, within CA264_11935 at 2774.708 kb on - strand, within CA264_11935 at 2774.721 kb on + strand, within CA264_11935 at 2774.731 kb on + strand, within CA264_11935 at 2774.773 kb on + strand, within CA264_11935 at 2774.806 kb on - strand, within CA264_11935 at 2774.811 kb on - strand at 2774.830 kb on + strand at 2774.830 kb on + strand at 2774.830 kb on + strand at 2774.831 kb on - strand at 2774.831 kb on - strand at 2774.869 kb on + strand at 2774.869 kb on + strand at 2774.869 kb on + strand at 2774.869 kb on + strand at 2774.880 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,772,103 - CA264_11920 0.68 -1.1 2,772,126 + CA264_11920 0.71 -0.5 2,772,126 + CA264_11920 0.71 +0.2 2,772,126 + CA264_11920 0.71 +0.4 2,772,126 + CA264_11920 0.71 -0.4 2,772,188 - CA264_11920 0.79 -0.3 2,772,189 + CA264_11920 0.79 -0.8 2,772,193 - CA264_11920 0.79 -0.4 2,772,227 - CA264_11920 0.83 -0.2 2,772,229 - CA264_11920 0.84 -0.3 2,772,271 + CA264_11920 0.89 -1.7 2,772,308 - -0.2 2,772,400 + -0.3 2,772,400 + +0.7 2,772,428 + +0.4 2,772,428 + -0.2 2,772,428 + +0.5 2,772,437 + -0.7 2,772,438 - -0.7 2,772,601 + CA264_11925 0.24 -0.5 2,772,866 - CA264_11925 0.66 -1.0 2,772,866 - CA264_11925 0.66 +0.1 2,772,866 - CA264_11925 0.66 +0.2 2,772,867 + CA264_11925 0.66 -0.5 2,772,867 + CA264_11925 0.66 -0.2 2,772,867 + CA264_11925 0.66 +1.4 2,773,017 + -0.8 2,773,017 + +0.3 2,773,036 + +0.2 2,773,094 + -1.2 2,773,106 + -0.1 2,773,107 - +1.4 2,773,107 - -0.0 2,773,107 - +1.4 2,773,321 + CA264_11930 0.29 -0.3 2,773,543 - CA264_11930 0.56 -2.0 2,773,543 - CA264_11930 0.56 +0.0 2,773,544 + CA264_11930 0.57 -0.6 2,773,545 - CA264_11930 0.57 -0.1 2,773,547 - CA264_11930 0.57 +0.2 2,773,547 - CA264_11930 0.57 -0.6 2,773,557 + CA264_11930 0.58 +0.9 2,773,659 - CA264_11930 0.71 -0.3 2,773,867 - +0.9 2,773,886 + -0.1 2,773,887 - -0.3 2,773,887 - +1.0 2,773,962 + -1.1 2,773,962 + -0.3 2,773,963 - +1.9 2,773,964 + -0.2 2,773,973 - +0.0 2,773,977 + +1.0 2,773,982 + -0.4 2,773,986 + -0.8 2,773,986 + -0.6 2,773,987 - -0.4 2,773,991 - -0.1 2,773,991 - +0.6 2,773,991 - -0.0 2,773,994 + -0.3 2,773,994 + +0.3 2,773,994 + +0.0 2,773,995 - +0.1 2,773,995 - -0.7 2,774,005 + +0.1 2,774,005 + +0.0 2,774,005 + +0.8 2,774,006 - +1.2 2,774,063 + -0.8 2,774,079 + +1.2 2,774,088 - +0.2 2,774,088 - -0.6 2,774,108 + +0.7 2,774,108 + +0.2 2,774,109 - -0.2 2,774,109 - -0.3 2,774,109 - -0.5 2,774,114 + -0.6 2,774,229 - -0.4 2,774,287 + +0.3 2,774,310 + -0.2 2,774,311 - +0.3 2,774,311 - -0.2 2,774,708 - CA264_11935 0.73 -1.4 2,774,708 - CA264_11935 0.73 -0.6 2,774,721 + CA264_11935 0.75 -0.0 2,774,731 + CA264_11935 0.77 -0.1 2,774,773 + CA264_11935 0.84 +0.2 2,774,806 - CA264_11935 0.89 -0.5 2,774,811 - +0.4 2,774,830 + +0.3 2,774,830 + -0.1 2,774,830 + +0.4 2,774,831 - +0.5 2,774,831 - -1.0 2,774,869 + +0.3 2,774,869 + -0.5 2,774,869 + -0.2 2,774,869 + -1.4 2,774,880 + -0.1
Or see this region's nucleotide sequence