Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09940 and CA264_09945 are separated by 56 nucleotides CA264_09945 and CA264_09950 are separated by 27 nucleotides
CA264_09940: CA264_09940 - conjugative transposon protein TraM, at 2,315,242 to 2,316,486
_09940
CA264_09945: CA264_09945 - conjugative transposon protein TraK, at 2,316,543 to 2,317,160
_09945
CA264_09950: CA264_09950 - conjugative transposon protein TraJ, at 2,317,188 to 2,318,399
_09950
Position (kb)
2316
2317
2318 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2315.621 kb on - strand, within CA264_09940 at 2315.786 kb on - strand, within CA264_09940 at 2315.794 kb on + strand, within CA264_09940 at 2315.998 kb on + strand, within CA264_09940 at 2316.098 kb on + strand, within CA264_09940 at 2316.099 kb on - strand, within CA264_09940 at 2316.099 kb on - strand, within CA264_09940 at 2316.210 kb on - strand, within CA264_09940 at 2316.219 kb on + strand, within CA264_09940 at 2316.219 kb on + strand, within CA264_09940 at 2316.220 kb on - strand, within CA264_09940 at 2316.266 kb on + strand, within CA264_09940 at 2316.266 kb on + strand, within CA264_09940 at 2316.269 kb on + strand, within CA264_09940 at 2316.514 kb on + strand at 2316.514 kb on + strand at 2316.515 kb on - strand at 2316.515 kb on - strand at 2316.757 kb on - strand, within CA264_09945 at 2316.857 kb on - strand, within CA264_09945 at 2316.857 kb on - strand, within CA264_09945 at 2317.016 kb on - strand, within CA264_09945 at 2317.160 kb on + strand at 2317.160 kb on + strand at 2317.190 kb on - strand at 2317.498 kb on + strand, within CA264_09950 at 2317.499 kb on - strand, within CA264_09950 at 2317.627 kb on + strand, within CA264_09950 at 2317.664 kb on + strand, within CA264_09950 at 2317.774 kb on + strand, within CA264_09950 at 2317.774 kb on + strand, within CA264_09950 at 2317.912 kb on + strand, within CA264_09950 at 2317.913 kb on - strand, within CA264_09950 at 2317.919 kb on - strand, within CA264_09950 at 2317.957 kb on + strand, within CA264_09950 at 2317.957 kb on + strand, within CA264_09950 at 2317.958 kb on - strand, within CA264_09950 at 2318.124 kb on + strand, within CA264_09950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,315,621 - CA264_09940 0.30 -0.2 2,315,786 - CA264_09940 0.44 -1.1 2,315,794 + CA264_09940 0.44 +0.6 2,315,998 + CA264_09940 0.61 +0.5 2,316,098 + CA264_09940 0.69 -0.3 2,316,099 - CA264_09940 0.69 +0.4 2,316,099 - CA264_09940 0.69 +0.4 2,316,210 - CA264_09940 0.78 +0.4 2,316,219 + CA264_09940 0.78 +0.8 2,316,219 + CA264_09940 0.78 +0.2 2,316,220 - CA264_09940 0.79 +1.2 2,316,266 + CA264_09940 0.82 +0.2 2,316,266 + CA264_09940 0.82 +2.2 2,316,269 + CA264_09940 0.82 +0.1 2,316,514 + -0.5 2,316,514 + +0.1 2,316,515 - -1.3 2,316,515 - -0.6 2,316,757 - CA264_09945 0.35 -0.6 2,316,857 - CA264_09945 0.51 -2.0 2,316,857 - CA264_09945 0.51 -0.6 2,317,016 - CA264_09945 0.77 -1.1 2,317,160 + -2.1 2,317,160 + -1.1 2,317,190 - +0.0 2,317,498 + CA264_09950 0.26 -0.7 2,317,499 - CA264_09950 0.26 -0.4 2,317,627 + CA264_09950 0.36 +0.3 2,317,664 + CA264_09950 0.39 +0.3 2,317,774 + CA264_09950 0.48 -0.5 2,317,774 + CA264_09950 0.48 +0.3 2,317,912 + CA264_09950 0.60 -0.2 2,317,913 - CA264_09950 0.60 -0.3 2,317,919 - CA264_09950 0.60 -0.3 2,317,957 + CA264_09950 0.63 +0.0 2,317,957 + CA264_09950 0.63 +1.1 2,317,958 - CA264_09950 0.64 -1.3 2,318,124 + CA264_09950 0.77 +0.8
Or see this region's nucleotide sequence