Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09235 and CA264_09240 are separated by 3 nucleotides CA264_09240 and CA264_09245 are separated by 16 nucleotides CA264_09245 and CA264_09250 are separated by 38 nucleotides
CA264_09235: CA264_09235 - short-chain dehydrogenase, at 2,160,863 to 2,161,717
_09235
CA264_09240: CA264_09240 - aldehyde dehydrogenase, at 2,161,721 to 2,163,148
_09240
CA264_09245: CA264_09245 - hypothetical protein, at 2,163,165 to 2,163,536
_09245
CA264_09250: CA264_09250 - hemolysin, at 2,163,575 to 2,164,624
_09250
Position (kb)
2161
2162
2163
2164 Strain fitness (log2 ratio)
-2
-1
0
1 at 2160.812 kb on - strand at 2160.819 kb on - strand at 2160.823 kb on + strand at 2160.835 kb on + strand at 2160.835 kb on + strand at 2160.836 kb on - strand at 2160.837 kb on + strand at 2160.845 kb on + strand at 2160.873 kb on + strand at 2160.967 kb on + strand, within CA264_09235 at 2160.980 kb on - strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.039 kb on + strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.040 kb on - strand, within CA264_09235 at 2161.043 kb on + strand, within CA264_09235 at 2161.044 kb on - strand, within CA264_09235 at 2161.044 kb on - strand, within CA264_09235 at 2161.051 kb on - strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.122 kb on + strand, within CA264_09235 at 2161.201 kb on + strand, within CA264_09235 at 2161.328 kb on + strand, within CA264_09235 at 2161.411 kb on - strand, within CA264_09235 at 2161.411 kb on - strand, within CA264_09235 at 2161.431 kb on - strand, within CA264_09235 at 2161.435 kb on - strand, within CA264_09235 at 2161.593 kb on + strand, within CA264_09235 at 2161.620 kb on + strand, within CA264_09235 at 2161.620 kb on + strand, within CA264_09235 at 2161.621 kb on - strand, within CA264_09235 at 2161.621 kb on - strand, within CA264_09235 at 2161.638 kb on + strand at 2161.639 kb on - strand at 2161.640 kb on + strand at 2161.640 kb on + strand at 2161.640 kb on + strand at 2161.641 kb on - strand at 2161.641 kb on - strand at 2161.716 kb on - strand at 2161.716 kb on - strand at 2161.720 kb on + strand at 2161.721 kb on - strand at 2161.795 kb on - strand at 2161.839 kb on + strand at 2161.839 kb on + strand at 2162.067 kb on - strand, within CA264_09240 at 2162.074 kb on + strand, within CA264_09240 at 2162.084 kb on + strand, within CA264_09240 at 2162.098 kb on + strand, within CA264_09240 at 2162.099 kb on - strand, within CA264_09240 at 2162.101 kb on + strand, within CA264_09240 at 2162.102 kb on - strand, within CA264_09240 at 2162.102 kb on - strand, within CA264_09240 at 2162.103 kb on + strand, within CA264_09240 at 2162.103 kb on + strand, within CA264_09240 at 2162.104 kb on - strand, within CA264_09240 at 2162.104 kb on - strand, within CA264_09240 at 2162.256 kb on - strand, within CA264_09240 at 2162.801 kb on - strand, within CA264_09240 at 2162.882 kb on - strand, within CA264_09240 at 2162.904 kb on + strand, within CA264_09240 at 2162.905 kb on - strand, within CA264_09240 at 2162.909 kb on + strand, within CA264_09240 at 2162.910 kb on - strand, within CA264_09240 at 2162.957 kb on - strand, within CA264_09240 at 2162.959 kb on - strand, within CA264_09240 at 2162.959 kb on - strand, within CA264_09240 at 2162.986 kb on - strand, within CA264_09240 at 2163.136 kb on + strand at 2163.234 kb on - strand, within CA264_09245 at 2163.293 kb on + strand, within CA264_09245 at 2163.394 kb on + strand, within CA264_09245 at 2163.401 kb on + strand, within CA264_09245 at 2163.403 kb on - strand, within CA264_09245 at 2163.509 kb on - strand at 2163.509 kb on - strand at 2163.538 kb on + strand at 2163.545 kb on + strand at 2163.546 kb on - strand at 2163.682 kb on + strand, within CA264_09250 at 2163.724 kb on + strand, within CA264_09250 at 2163.725 kb on - strand, within CA264_09250 at 2163.736 kb on - strand, within CA264_09250 at 2163.736 kb on - strand, within CA264_09250 at 2163.757 kb on - strand, within CA264_09250 at 2163.760 kb on + strand, within CA264_09250 at 2163.760 kb on + strand, within CA264_09250 at 2163.769 kb on + strand, within CA264_09250 at 2163.836 kb on + strand, within CA264_09250 at 2163.941 kb on - strand, within CA264_09250 at 2163.941 kb on - strand, within CA264_09250 at 2163.968 kb on + strand, within CA264_09250 at 2163.969 kb on - strand, within CA264_09250 at 2164.097 kb on - strand, within CA264_09250 at 2164.133 kb on - strand, within CA264_09250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,160,812 - +0.2 2,160,819 - -1.7 2,160,823 + -0.7 2,160,835 + -1.8 2,160,835 + -1.1 2,160,836 - -0.2 2,160,837 + -0.7 2,160,845 + +0.6 2,160,873 + -0.4 2,160,967 + CA264_09235 0.12 -0.7 2,160,980 - CA264_09235 0.14 +0.4 2,161,039 + CA264_09235 0.21 +0.6 2,161,039 + CA264_09235 0.21 -1.5 2,161,039 + CA264_09235 0.21 -0.2 2,161,040 - CA264_09235 0.21 -0.1 2,161,040 - CA264_09235 0.21 +0.3 2,161,040 - CA264_09235 0.21 -0.7 2,161,043 + CA264_09235 0.21 -0.1 2,161,044 - CA264_09235 0.21 -0.2 2,161,044 - CA264_09235 0.21 -1.3 2,161,051 - CA264_09235 0.22 -0.7 2,161,122 + CA264_09235 0.30 -1.0 2,161,122 + CA264_09235 0.30 -0.1 2,161,122 + CA264_09235 0.30 -1.0 2,161,201 + CA264_09235 0.40 +0.1 2,161,328 + CA264_09235 0.54 -0.1 2,161,411 - CA264_09235 0.64 +0.1 2,161,411 - CA264_09235 0.64 -0.1 2,161,431 - CA264_09235 0.66 +0.3 2,161,435 - CA264_09235 0.67 +0.3 2,161,593 + CA264_09235 0.85 -0.8 2,161,620 + CA264_09235 0.89 -0.0 2,161,620 + CA264_09235 0.89 -0.6 2,161,621 - CA264_09235 0.89 +0.0 2,161,621 - CA264_09235 0.89 -0.0 2,161,638 + -0.7 2,161,639 - -0.9 2,161,640 + -1.3 2,161,640 + +0.0 2,161,640 + -0.9 2,161,641 - -0.1 2,161,641 - -0.7 2,161,716 - -0.2 2,161,716 - -0.3 2,161,720 + -0.1 2,161,721 - +0.1 2,161,795 - -0.1 2,161,839 + +0.4 2,161,839 + -0.7 2,162,067 - CA264_09240 0.24 -0.2 2,162,074 + CA264_09240 0.25 -0.4 2,162,084 + CA264_09240 0.25 -1.6 2,162,098 + CA264_09240 0.26 -1.1 2,162,099 - CA264_09240 0.26 +0.0 2,162,101 + CA264_09240 0.27 -0.0 2,162,102 - CA264_09240 0.27 -1.1 2,162,102 - CA264_09240 0.27 +0.5 2,162,103 + CA264_09240 0.27 -1.8 2,162,103 + CA264_09240 0.27 -0.6 2,162,104 - CA264_09240 0.27 +0.4 2,162,104 - CA264_09240 0.27 -0.1 2,162,256 - CA264_09240 0.37 -0.6 2,162,801 - CA264_09240 0.76 -0.0 2,162,882 - CA264_09240 0.81 -1.3 2,162,904 + CA264_09240 0.83 -0.9 2,162,905 - CA264_09240 0.83 -0.3 2,162,909 + CA264_09240 0.83 -0.1 2,162,910 - CA264_09240 0.83 -2.2 2,162,957 - CA264_09240 0.87 -0.1 2,162,959 - CA264_09240 0.87 -1.3 2,162,959 - CA264_09240 0.87 -1.0 2,162,986 - CA264_09240 0.89 +0.1 2,163,136 + -0.4 2,163,234 - CA264_09245 0.19 -0.4 2,163,293 + CA264_09245 0.34 -0.6 2,163,394 + CA264_09245 0.62 -0.7 2,163,401 + CA264_09245 0.63 -1.3 2,163,403 - CA264_09245 0.64 -0.6 2,163,509 - -0.1 2,163,509 - -0.6 2,163,538 + -1.8 2,163,545 + -0.9 2,163,546 - +0.1 2,163,682 + CA264_09250 0.10 +0.8 2,163,724 + CA264_09250 0.14 +0.6 2,163,725 - CA264_09250 0.14 -0.3 2,163,736 - CA264_09250 0.15 -0.9 2,163,736 - CA264_09250 0.15 -1.4 2,163,757 - CA264_09250 0.17 -1.4 2,163,760 + CA264_09250 0.18 +0.1 2,163,760 + CA264_09250 0.18 +0.2 2,163,769 + CA264_09250 0.18 +0.9 2,163,836 + CA264_09250 0.25 +0.3 2,163,941 - CA264_09250 0.35 -0.3 2,163,941 - CA264_09250 0.35 -0.0 2,163,968 + CA264_09250 0.37 +0.4 2,163,969 - CA264_09250 0.38 -0.4 2,164,097 - CA264_09250 0.50 -0.7 2,164,133 - CA264_09250 0.53 +0.9
Or see this region's nucleotide sequence