Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09070 and CA264_09075 overlap by 8 nucleotides CA264_09075 and CA264_09080 are separated by 220 nucleotides CA264_09080 and CA264_09085 are separated by 3 nucleotides
CA264_09070: CA264_09070 - hypothetical protein, at 2,124,238 to 2,124,498
_09070
CA264_09075: CA264_09075 - response regulator, at 2,124,491 to 2,124,889
_09075
CA264_09080: CA264_09080 - FUSC family protein, at 2,125,110 to 2,126,162
_09080
CA264_09085: CA264_09085 - sugar hydrolase, at 2,126,166 to 2,128,481
_09085
Position (kb)
2125
2126
2127 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2124.147 kb on - strand at 2124.173 kb on + strand at 2124.185 kb on + strand at 2124.185 kb on + strand at 2124.186 kb on - strand at 2124.187 kb on + strand at 2124.187 kb on + strand at 2124.188 kb on - strand at 2124.188 kb on - strand at 2124.188 kb on - strand at 2124.188 kb on - strand at 2124.188 kb on - strand at 2124.188 kb on - strand at 2124.192 kb on - strand at 2124.193 kb on + strand at 2124.194 kb on - strand at 2124.194 kb on - strand at 2124.196 kb on + strand at 2124.196 kb on + strand at 2124.196 kb on + strand at 2124.197 kb on - strand at 2124.216 kb on - strand at 2124.219 kb on + strand at 2124.231 kb on + strand at 2124.231 kb on + strand at 2124.231 kb on + strand at 2124.232 kb on - strand at 2124.329 kb on - strand, within CA264_09070 at 2124.378 kb on - strand, within CA264_09070 at 2124.384 kb on + strand, within CA264_09070 at 2124.385 kb on - strand, within CA264_09070 at 2124.474 kb on - strand at 2124.495 kb on - strand at 2124.497 kb on - strand at 2124.581 kb on + strand, within CA264_09075 at 2124.587 kb on - strand, within CA264_09075 at 2124.694 kb on + strand, within CA264_09075 at 2124.694 kb on + strand, within CA264_09075 at 2124.694 kb on - strand, within CA264_09075 at 2124.731 kb on + strand, within CA264_09075 at 2124.731 kb on + strand, within CA264_09075 at 2124.765 kb on - strand, within CA264_09075 at 2124.767 kb on - strand, within CA264_09075 at 2124.909 kb on - strand at 2124.935 kb on - strand at 2124.940 kb on + strand at 2124.954 kb on - strand at 2124.970 kb on - strand at 2125.061 kb on + strand at 2125.102 kb on - strand at 2125.106 kb on + strand at 2125.106 kb on + strand at 2125.107 kb on - strand at 2125.107 kb on - strand at 2125.110 kb on - strand at 2125.110 kb on - strand at 2125.230 kb on + strand, within CA264_09080 at 2125.501 kb on - strand, within CA264_09080 at 2125.604 kb on + strand, within CA264_09080 at 2125.605 kb on - strand, within CA264_09080 at 2125.607 kb on - strand, within CA264_09080 at 2125.734 kb on - strand, within CA264_09080 at 2125.847 kb on + strand, within CA264_09080 at 2125.887 kb on - strand, within CA264_09080 at 2125.966 kb on + strand, within CA264_09080 at 2125.967 kb on - strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.032 kb on + strand, within CA264_09080 at 2126.033 kb on - strand, within CA264_09080 at 2126.033 kb on - strand, within CA264_09080 at 2126.033 kb on - strand, within CA264_09080 at 2126.210 kb on - strand at 2126.210 kb on - strand at 2126.210 kb on - strand at 2126.299 kb on + strand at 2126.299 kb on + strand at 2126.309 kb on + strand at 2126.361 kb on + strand at 2126.361 kb on + strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.362 kb on - strand at 2126.509 kb on + strand, within CA264_09085 at 2126.510 kb on - strand, within CA264_09085 at 2126.510 kb on - strand, within CA264_09085 at 2126.520 kb on + strand, within CA264_09085 at 2126.573 kb on - strand, within CA264_09085 at 2126.579 kb on - strand, within CA264_09085 at 2126.614 kb on + strand, within CA264_09085 at 2126.615 kb on - strand, within CA264_09085 at 2126.615 kb on - strand, within CA264_09085 at 2126.662 kb on + strand, within CA264_09085 at 2126.764 kb on + strand, within CA264_09085 at 2126.774 kb on - strand, within CA264_09085 at 2126.796 kb on - strand, within CA264_09085 at 2126.867 kb on + strand, within CA264_09085 at 2126.889 kb on + strand, within CA264_09085 at 2126.899 kb on + strand, within CA264_09085 at 2126.918 kb on + strand, within CA264_09085 at 2126.930 kb on - strand, within CA264_09085 at 2126.983 kb on + strand, within CA264_09085 at 2126.983 kb on + strand, within CA264_09085 at 2126.990 kb on - strand, within CA264_09085 at 2126.990 kb on - strand, within CA264_09085 at 2127.002 kb on + strand, within CA264_09085 at 2127.003 kb on - strand, within CA264_09085 at 2127.038 kb on - strand, within CA264_09085 at 2127.052 kb on + strand, within CA264_09085 at 2127.052 kb on + strand, within CA264_09085 at 2127.053 kb on - strand, within CA264_09085 at 2127.070 kb on + strand, within CA264_09085 at 2127.070 kb on + strand, within CA264_09085 at 2127.071 kb on - strand, within CA264_09085 at 2127.073 kb on + strand, within CA264_09085 at 2127.159 kb on - strand, within CA264_09085
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,124,147 - +2.0 2,124,173 + -0.6 2,124,185 + -1.0 2,124,185 + -0.1 2,124,186 - +0.1 2,124,187 + -0.5 2,124,187 + +0.7 2,124,188 - -0.2 2,124,188 - -0.3 2,124,188 - +0.5 2,124,188 - -0.8 2,124,188 - +0.1 2,124,188 - +0.3 2,124,192 - +0.1 2,124,193 + -0.2 2,124,194 - +0.4 2,124,194 - -0.3 2,124,196 + -2.2 2,124,196 + +0.9 2,124,196 + +0.1 2,124,197 - -0.5 2,124,216 - +0.7 2,124,219 + +0.1 2,124,231 + +0.7 2,124,231 + +1.6 2,124,231 + +0.2 2,124,232 - +0.2 2,124,329 - CA264_09070 0.35 +0.3 2,124,378 - CA264_09070 0.54 -0.3 2,124,384 + CA264_09070 0.56 +0.3 2,124,385 - CA264_09070 0.56 +0.2 2,124,474 - -0.6 2,124,495 - +0.1 2,124,497 - -1.1 2,124,581 + CA264_09075 0.23 -0.0 2,124,587 - CA264_09075 0.24 +0.2 2,124,694 + CA264_09075 0.51 -0.4 2,124,694 + CA264_09075 0.51 +0.1 2,124,694 - CA264_09075 0.51 -0.2 2,124,731 + CA264_09075 0.60 -0.1 2,124,731 + CA264_09075 0.60 +0.5 2,124,765 - CA264_09075 0.69 -0.4 2,124,767 - CA264_09075 0.69 -1.0 2,124,909 - -0.4 2,124,935 - -0.1 2,124,940 + +0.5 2,124,954 - -0.5 2,124,970 - +0.3 2,125,061 + +0.4 2,125,102 - +0.7 2,125,106 + -2.0 2,125,106 + +1.8 2,125,107 - +1.2 2,125,107 - +1.2 2,125,110 - +0.0 2,125,110 - -0.6 2,125,230 + CA264_09080 0.11 +0.4 2,125,501 - CA264_09080 0.37 +0.3 2,125,604 + CA264_09080 0.47 -1.0 2,125,605 - CA264_09080 0.47 -0.9 2,125,607 - CA264_09080 0.47 -0.4 2,125,734 - CA264_09080 0.59 -0.0 2,125,847 + CA264_09080 0.70 +0.6 2,125,887 - CA264_09080 0.74 -0.0 2,125,966 + CA264_09080 0.81 -1.0 2,125,967 - CA264_09080 0.81 -0.0 2,126,032 + CA264_09080 0.88 -0.3 2,126,032 + CA264_09080 0.88 -0.5 2,126,032 + CA264_09080 0.88 -0.9 2,126,032 + CA264_09080 0.88 -0.5 2,126,032 + CA264_09080 0.88 -0.2 2,126,033 - CA264_09080 0.88 -0.4 2,126,033 - CA264_09080 0.88 -0.5 2,126,033 - CA264_09080 0.88 +0.1 2,126,210 - -0.4 2,126,210 - +0.2 2,126,210 - +0.0 2,126,299 + -0.7 2,126,299 + -1.5 2,126,309 + -0.3 2,126,361 + -0.2 2,126,361 + -0.2 2,126,362 - -1.0 2,126,362 - -0.1 2,126,362 - -0.9 2,126,362 - +0.1 2,126,362 - +0.2 2,126,362 - -0.3 2,126,362 - +0.2 2,126,509 + CA264_09085 0.15 +0.6 2,126,510 - CA264_09085 0.15 +0.2 2,126,510 - CA264_09085 0.15 -0.0 2,126,520 + CA264_09085 0.15 +0.9 2,126,573 - CA264_09085 0.18 +0.1 2,126,579 - CA264_09085 0.18 -1.1 2,126,614 + CA264_09085 0.19 +0.8 2,126,615 - CA264_09085 0.19 -1.0 2,126,615 - CA264_09085 0.19 -1.2 2,126,662 + CA264_09085 0.21 +0.9 2,126,764 + CA264_09085 0.26 -1.6 2,126,774 - CA264_09085 0.26 +1.3 2,126,796 - CA264_09085 0.27 -0.2 2,126,867 + CA264_09085 0.30 +0.5 2,126,889 + CA264_09085 0.31 -0.1 2,126,899 + CA264_09085 0.32 -0.2 2,126,918 + CA264_09085 0.32 -0.3 2,126,930 - CA264_09085 0.33 -0.6 2,126,983 + CA264_09085 0.35 +0.1 2,126,983 + CA264_09085 0.35 -1.0 2,126,990 - CA264_09085 0.36 -0.4 2,126,990 - CA264_09085 0.36 +0.1 2,127,002 + CA264_09085 0.36 -0.2 2,127,003 - CA264_09085 0.36 -0.6 2,127,038 - CA264_09085 0.38 +0.1 2,127,052 + CA264_09085 0.38 -1.1 2,127,052 + CA264_09085 0.38 +0.9 2,127,053 - CA264_09085 0.38 +0.1 2,127,070 + CA264_09085 0.39 -1.1 2,127,070 + CA264_09085 0.39 -0.6 2,127,071 - CA264_09085 0.39 +1.0 2,127,073 + CA264_09085 0.39 +0.3 2,127,159 - CA264_09085 0.43 -2.4
Or see this region's nucleotide sequence