Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08990 and CA264_08995 overlap by 4 nucleotides CA264_08995 and CA264_09000 are separated by 10 nucleotides CA264_09000 and CA264_09005 are separated by 282 nucleotides
CA264_08990: CA264_08990 - FeS-binding protein, at 2,099,267 to 2,100,811
_08990
CA264_08995: CA264_08995 - FAD-dependent oxidoreductase, at 2,100,808 to 2,102,205
_08995
CA264_09000: CA264_09000 - hypothetical protein, at 2,102,216 to 2,102,473
_09000
CA264_09005: CA264_09005 - hypothetical protein, at 2,102,756 to 2,103,265
_09005
Position (kb)
2100
2101
2102
2103 Strain fitness (log2 ratio)
-2
-1
0
1 at 2099.951 kb on - strand, within CA264_08990 at 2099.951 kb on - strand, within CA264_08990 at 2099.987 kb on - strand, within CA264_08990 at 2099.987 kb on - strand, within CA264_08990 at 2099.988 kb on + strand, within CA264_08990 at 2100.028 kb on + strand, within CA264_08990 at 2100.115 kb on + strand, within CA264_08990 at 2100.115 kb on + strand, within CA264_08990 at 2100.129 kb on + strand, within CA264_08990 at 2100.145 kb on - strand, within CA264_08990 at 2100.177 kb on - strand, within CA264_08990 at 2100.178 kb on + strand, within CA264_08990 at 2100.187 kb on + strand, within CA264_08990 at 2100.187 kb on + strand, within CA264_08990 at 2100.188 kb on - strand, within CA264_08990 at 2100.188 kb on - strand, within CA264_08990 at 2100.201 kb on + strand, within CA264_08990 at 2100.280 kb on - strand, within CA264_08990 at 2100.306 kb on + strand, within CA264_08990 at 2100.307 kb on - strand, within CA264_08990 at 2100.307 kb on - strand, within CA264_08990 at 2100.308 kb on + strand, within CA264_08990 at 2100.426 kb on + strand, within CA264_08990 at 2100.427 kb on - strand, within CA264_08990 at 2100.427 kb on - strand, within CA264_08990 at 2100.450 kb on - strand, within CA264_08990 at 2100.531 kb on + strand, within CA264_08990 at 2100.531 kb on + strand, within CA264_08990 at 2100.531 kb on + strand, within CA264_08990 at 2100.585 kb on + strand, within CA264_08990 at 2100.585 kb on + strand, within CA264_08990 at 2100.586 kb on - strand, within CA264_08990 at 2100.636 kb on + strand, within CA264_08990 at 2100.694 kb on + strand at 2100.694 kb on + strand at 2100.694 kb on + strand at 2100.694 kb on + strand at 2100.695 kb on - strand at 2100.695 kb on - strand at 2100.695 kb on - strand at 2100.780 kb on - strand at 2100.804 kb on - strand at 2100.830 kb on - strand at 2100.896 kb on + strand at 2100.896 kb on + strand at 2100.897 kb on - strand at 2100.897 kb on - strand at 2100.897 kb on - strand at 2100.897 kb on - strand at 2100.904 kb on + strand at 2100.930 kb on - strand at 2101.118 kb on + strand, within CA264_08995 at 2101.163 kb on + strand, within CA264_08995 at 2101.219 kb on - strand, within CA264_08995 at 2101.221 kb on - strand, within CA264_08995 at 2101.278 kb on + strand, within CA264_08995 at 2101.280 kb on + strand, within CA264_08995 at 2101.281 kb on - strand, within CA264_08995 at 2101.349 kb on + strand, within CA264_08995 at 2101.352 kb on - strand, within CA264_08995 at 2101.352 kb on - strand, within CA264_08995 at 2101.377 kb on - strand, within CA264_08995 at 2101.543 kb on + strand, within CA264_08995 at 2101.544 kb on - strand, within CA264_08995 at 2101.597 kb on + strand, within CA264_08995 at 2101.659 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.667 kb on - strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.702 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.785 kb on - strand, within CA264_08995 at 2101.869 kb on - strand, within CA264_08995 at 2101.989 kb on + strand, within CA264_08995 at 2101.997 kb on + strand, within CA264_08995 at 2102.226 kb on + strand at 2102.227 kb on - strand at 2102.281 kb on + strand, within CA264_09000 at 2102.281 kb on + strand, within CA264_09000 at 2102.285 kb on + strand, within CA264_09000 at 2102.285 kb on + strand, within CA264_09000 at 2102.286 kb on - strand, within CA264_09000 at 2102.309 kb on - strand, within CA264_09000 at 2102.338 kb on + strand, within CA264_09000 at 2102.338 kb on + strand, within CA264_09000 at 2102.339 kb on - strand, within CA264_09000 at 2102.339 kb on - strand, within CA264_09000 at 2102.415 kb on - strand, within CA264_09000 at 2102.435 kb on + strand, within CA264_09000 at 2102.441 kb on + strand, within CA264_09000 at 2102.441 kb on + strand, within CA264_09000 at 2102.442 kb on - strand, within CA264_09000 at 2102.448 kb on - strand at 2102.448 kb on - strand at 2102.486 kb on + strand at 2102.486 kb on + strand at 2102.487 kb on - strand at 2102.487 kb on - strand at 2102.524 kb on + strand at 2102.525 kb on - strand at 2102.528 kb on + strand at 2102.528 kb on + strand at 2102.531 kb on + strand at 2102.531 kb on + strand at 2102.535 kb on + strand at 2102.536 kb on - strand at 2102.621 kb on + strand at 2102.621 kb on + strand at 2102.622 kb on - strand at 2102.642 kb on - strand at 2102.705 kb on + strand at 2102.706 kb on - strand at 2102.706 kb on - strand at 2102.712 kb on + strand at 2102.713 kb on - strand at 2102.726 kb on - strand at 2102.731 kb on + strand at 2102.732 kb on - strand at 2102.735 kb on + strand at 2102.735 kb on + strand at 2102.735 kb on + strand at 2102.736 kb on - strand at 2102.736 kb on - strand at 2102.738 kb on + strand at 2102.738 kb on + strand at 2102.739 kb on - strand at 2102.844 kb on + strand, within CA264_09005 at 2102.868 kb on + strand, within CA264_09005 at 2102.868 kb on + strand, within CA264_09005 at 2102.869 kb on - strand, within CA264_09005 at 2102.869 kb on - strand, within CA264_09005 at 2102.921 kb on + strand, within CA264_09005 at 2103.198 kb on - strand, within CA264_09005 at 2103.198 kb on - strand, within CA264_09005 at 2103.198 kb on - strand, within CA264_09005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,099,951 - CA264_08990 0.44 +0.3 2,099,951 - CA264_08990 0.44 +0.2 2,099,987 - CA264_08990 0.47 -0.6 2,099,987 - CA264_08990 0.47 -1.6 2,099,988 + CA264_08990 0.47 +0.5 2,100,028 + CA264_08990 0.49 +0.2 2,100,115 + CA264_08990 0.55 -0.0 2,100,115 + CA264_08990 0.55 -0.4 2,100,129 + CA264_08990 0.56 -0.2 2,100,145 - CA264_08990 0.57 -0.5 2,100,177 - CA264_08990 0.59 -1.5 2,100,178 + CA264_08990 0.59 -0.7 2,100,187 + CA264_08990 0.60 +0.2 2,100,187 + CA264_08990 0.60 -0.7 2,100,188 - CA264_08990 0.60 +0.7 2,100,188 - CA264_08990 0.60 -0.3 2,100,201 + CA264_08990 0.60 -0.0 2,100,280 - CA264_08990 0.66 +0.5 2,100,306 + CA264_08990 0.67 -0.4 2,100,307 - CA264_08990 0.67 -1.0 2,100,307 - CA264_08990 0.67 -1.8 2,100,308 + CA264_08990 0.67 -0.8 2,100,426 + CA264_08990 0.75 -0.0 2,100,427 - CA264_08990 0.75 +0.0 2,100,427 - CA264_08990 0.75 -0.1 2,100,450 - CA264_08990 0.77 +0.3 2,100,531 + CA264_08990 0.82 -0.2 2,100,531 + CA264_08990 0.82 -0.3 2,100,531 + CA264_08990 0.82 +0.2 2,100,585 + CA264_08990 0.85 +0.3 2,100,585 + CA264_08990 0.85 -0.2 2,100,586 - CA264_08990 0.85 -0.5 2,100,636 + CA264_08990 0.89 -0.5 2,100,694 + +0.3 2,100,694 + -0.3 2,100,694 + +0.2 2,100,694 + -0.2 2,100,695 - -1.3 2,100,695 - -0.5 2,100,695 - -0.0 2,100,780 - +0.3 2,100,804 - -0.3 2,100,830 - +0.4 2,100,896 + -0.3 2,100,896 + +0.2 2,100,897 - -1.3 2,100,897 - -0.2 2,100,897 - -0.6 2,100,897 - -1.2 2,100,904 + -0.1 2,100,930 - -0.1 2,101,118 + CA264_08995 0.22 -0.1 2,101,163 + CA264_08995 0.25 -0.7 2,101,219 - CA264_08995 0.29 +1.5 2,101,221 - CA264_08995 0.30 -0.2 2,101,278 + CA264_08995 0.34 -1.1 2,101,280 + CA264_08995 0.34 -0.2 2,101,281 - CA264_08995 0.34 +1.5 2,101,349 + CA264_08995 0.39 -1.4 2,101,352 - CA264_08995 0.39 -0.1 2,101,352 - CA264_08995 0.39 +0.0 2,101,377 - CA264_08995 0.41 -1.0 2,101,543 + CA264_08995 0.53 -1.4 2,101,544 - CA264_08995 0.53 -0.5 2,101,597 + CA264_08995 0.56 -0.7 2,101,659 + CA264_08995 0.61 +0.3 2,101,666 + CA264_08995 0.61 -0.4 2,101,666 + CA264_08995 0.61 +0.2 2,101,666 + CA264_08995 0.61 +0.5 2,101,666 + CA264_08995 0.61 +0.5 2,101,667 - CA264_08995 0.61 -0.5 2,101,701 + CA264_08995 0.64 +0.4 2,101,701 + CA264_08995 0.64 -0.9 2,101,701 + CA264_08995 0.64 +1.3 2,101,702 - CA264_08995 0.64 -1.2 2,101,706 - CA264_08995 0.64 -1.8 2,101,706 - CA264_08995 0.64 -2.7 2,101,706 - CA264_08995 0.64 -0.5 2,101,785 - CA264_08995 0.70 -0.6 2,101,869 - CA264_08995 0.76 -0.1 2,101,989 + CA264_08995 0.84 +1.2 2,101,997 + CA264_08995 0.85 -0.6 2,102,226 + -0.6 2,102,227 - +0.1 2,102,281 + CA264_09000 0.25 +1.0 2,102,281 + CA264_09000 0.25 -0.3 2,102,285 + CA264_09000 0.27 +0.2 2,102,285 + CA264_09000 0.27 -0.1 2,102,286 - CA264_09000 0.27 -0.2 2,102,309 - CA264_09000 0.36 -1.7 2,102,338 + CA264_09000 0.47 -0.1 2,102,338 + CA264_09000 0.47 +1.6 2,102,339 - CA264_09000 0.48 -1.7 2,102,339 - CA264_09000 0.48 -1.1 2,102,415 - CA264_09000 0.77 -0.2 2,102,435 + CA264_09000 0.85 -0.0 2,102,441 + CA264_09000 0.87 -0.2 2,102,441 + CA264_09000 0.87 -0.3 2,102,442 - CA264_09000 0.88 -0.6 2,102,448 - -0.5 2,102,448 - -1.5 2,102,486 + -1.1 2,102,486 + -1.0 2,102,487 - +0.1 2,102,487 - +0.8 2,102,524 + -0.0 2,102,525 - -0.6 2,102,528 + +0.1 2,102,528 + +0.2 2,102,531 + -0.3 2,102,531 + -0.0 2,102,535 + -0.4 2,102,536 - +0.3 2,102,621 + +0.4 2,102,621 + -0.6 2,102,622 - +0.7 2,102,642 - +0.5 2,102,705 + -0.3 2,102,706 - -0.3 2,102,706 - -0.1 2,102,712 + +0.1 2,102,713 - -1.3 2,102,726 - -0.0 2,102,731 + +0.6 2,102,732 - +0.1 2,102,735 + -1.0 2,102,735 + -0.2 2,102,735 + -0.8 2,102,736 - +0.9 2,102,736 - -0.0 2,102,738 + +0.0 2,102,738 + +0.0 2,102,739 - -0.6 2,102,844 + CA264_09005 0.17 +0.2 2,102,868 + CA264_09005 0.22 -1.4 2,102,868 + CA264_09005 0.22 +1.2 2,102,869 - CA264_09005 0.22 +0.3 2,102,869 - CA264_09005 0.22 -0.1 2,102,921 + CA264_09005 0.32 -1.3 2,103,198 - CA264_09005 0.87 +0.1 2,103,198 - CA264_09005 0.87 +0.1 2,103,198 - CA264_09005 0.87 +0.4
Or see this region's nucleotide sequence