Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06855 and CA264_06860 are separated by 30 nucleotides CA264_06860 and CA264_06865 are separated by 267 nucleotides CA264_06865 and CA264_06870 are separated by 61 nucleotides
CA264_06855: CA264_06855 - nitrous oxide reductase, at 1,584,353 to 1,586,380
_06855
CA264_06860: CA264_06860 - cytochrome C, at 1,586,411 to 1,586,911
_06860
CA264_06865: CA264_06865 - hypothetical protein, at 1,587,179 to 1,587,499
_06865
CA264_06870: CA264_06870 - hypothetical protein, at 1,587,561 to 1,588,478
_06870
Position (kb)
1586
1587 Strain fitness (log2 ratio)
-1
0
1
2 at 1585.458 kb on + strand, within CA264_06855 at 1585.459 kb on - strand, within CA264_06855 at 1585.461 kb on + strand, within CA264_06855 at 1585.461 kb on + strand, within CA264_06855 at 1585.461 kb on + strand, within CA264_06855 at 1585.461 kb on + strand, within CA264_06855 at 1585.464 kb on + strand, within CA264_06855 at 1585.505 kb on + strand, within CA264_06855 at 1585.596 kb on + strand, within CA264_06855 at 1585.597 kb on - strand, within CA264_06855 at 1585.597 kb on - strand, within CA264_06855 at 1585.654 kb on - strand, within CA264_06855 at 1585.752 kb on + strand, within CA264_06855 at 1585.777 kb on - strand, within CA264_06855 at 1585.833 kb on + strand, within CA264_06855 at 1585.833 kb on + strand, within CA264_06855 at 1585.833 kb on + strand, within CA264_06855 at 1586.076 kb on + strand, within CA264_06855 at 1586.148 kb on + strand, within CA264_06855 at 1586.149 kb on - strand, within CA264_06855 at 1586.182 kb on + strand at 1586.182 kb on + strand at 1586.183 kb on - strand at 1586.183 kb on - strand at 1586.183 kb on - strand at 1586.188 kb on + strand at 1586.188 kb on + strand at 1586.188 kb on + strand at 1586.189 kb on - strand at 1586.189 kb on - strand at 1586.189 kb on - strand at 1586.190 kb on + strand at 1586.191 kb on - strand at 1586.220 kb on + strand at 1586.290 kb on + strand at 1586.369 kb on + strand at 1586.621 kb on + strand, within CA264_06860 at 1586.702 kb on + strand, within CA264_06860 at 1586.702 kb on + strand, within CA264_06860 at 1586.721 kb on - strand, within CA264_06860 at 1586.812 kb on - strand, within CA264_06860 at 1586.895 kb on - strand at 1586.911 kb on + strand at 1586.912 kb on - strand at 1586.972 kb on - strand at 1587.150 kb on + strand at 1587.151 kb on - strand at 1587.193 kb on + strand at 1587.193 kb on + strand at 1587.193 kb on + strand at 1587.224 kb on + strand, within CA264_06865 at 1587.226 kb on + strand, within CA264_06865 at 1587.226 kb on + strand, within CA264_06865 at 1587.227 kb on - strand, within CA264_06865 at 1587.236 kb on + strand, within CA264_06865 at 1587.236 kb on + strand, within CA264_06865 at 1587.287 kb on + strand, within CA264_06865 at 1587.291 kb on + strand, within CA264_06865 at 1587.442 kb on - strand, within CA264_06865 at 1587.447 kb on + strand, within CA264_06865 at 1587.447 kb on + strand, within CA264_06865 at 1587.447 kb on + strand, within CA264_06865 at 1587.448 kb on - strand, within CA264_06865 at 1587.448 kb on - strand, within CA264_06865 at 1587.448 kb on - strand, within CA264_06865 at 1587.449 kb on + strand, within CA264_06865 at 1587.449 kb on + strand, within CA264_06865 at 1587.450 kb on - strand, within CA264_06865 at 1587.450 kb on - strand, within CA264_06865 at 1587.450 kb on - strand, within CA264_06865 at 1587.450 kb on - strand, within CA264_06865 at 1587.497 kb on + strand at 1587.571 kb on + strand at 1587.575 kb on + strand at 1587.576 kb on - strand at 1587.576 kb on - strand at 1587.577 kb on + strand at 1587.717 kb on - strand, within CA264_06870 at 1587.732 kb on + strand, within CA264_06870 at 1587.733 kb on - strand, within CA264_06870 at 1587.816 kb on + strand, within CA264_06870 at 1587.826 kb on + strand, within CA264_06870 at 1587.826 kb on + strand, within CA264_06870 at 1587.826 kb on + strand, within CA264_06870 at 1587.827 kb on - strand, within CA264_06870 at 1587.877 kb on + strand, within CA264_06870 at 1587.878 kb on - strand, within CA264_06870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,585,458 + CA264_06855 0.54 +2.0 1,585,459 - CA264_06855 0.55 +0.1 1,585,461 + CA264_06855 0.55 -0.2 1,585,461 + CA264_06855 0.55 -1.2 1,585,461 + CA264_06855 0.55 -0.8 1,585,461 + CA264_06855 0.55 +1.0 1,585,464 + CA264_06855 0.55 -0.2 1,585,505 + CA264_06855 0.57 -0.6 1,585,596 + CA264_06855 0.61 +0.2 1,585,597 - CA264_06855 0.61 +0.8 1,585,597 - CA264_06855 0.61 -0.8 1,585,654 - CA264_06855 0.64 -0.3 1,585,752 + CA264_06855 0.69 -0.2 1,585,777 - CA264_06855 0.70 +0.8 1,585,833 + CA264_06855 0.73 -1.2 1,585,833 + CA264_06855 0.73 -0.1 1,585,833 + CA264_06855 0.73 +0.2 1,586,076 + CA264_06855 0.85 +0.1 1,586,148 + CA264_06855 0.89 -0.1 1,586,149 - CA264_06855 0.89 -0.7 1,586,182 + +0.8 1,586,182 + -0.6 1,586,183 - +0.7 1,586,183 - -0.1 1,586,183 - +0.2 1,586,188 + -0.7 1,586,188 + +1.1 1,586,188 + -0.0 1,586,189 - +0.2 1,586,189 - -0.3 1,586,189 - -1.1 1,586,190 + +0.3 1,586,191 - -0.5 1,586,220 + -0.5 1,586,290 + +1.7 1,586,369 + -0.8 1,586,621 + CA264_06860 0.42 +0.4 1,586,702 + CA264_06860 0.58 -1.3 1,586,702 + CA264_06860 0.58 -1.3 1,586,721 - CA264_06860 0.62 -0.4 1,586,812 - CA264_06860 0.80 -0.5 1,586,895 - -0.0 1,586,911 + +0.9 1,586,912 - +0.6 1,586,972 - +0.2 1,587,150 + +0.1 1,587,151 - +1.0 1,587,193 + -0.7 1,587,193 + -0.3 1,587,193 + +0.1 1,587,224 + CA264_06865 0.14 -0.8 1,587,226 + CA264_06865 0.15 -0.7 1,587,226 + CA264_06865 0.15 -0.9 1,587,227 - CA264_06865 0.15 -0.1 1,587,236 + CA264_06865 0.18 -0.8 1,587,236 + CA264_06865 0.18 +0.3 1,587,287 + CA264_06865 0.34 +0.1 1,587,291 + CA264_06865 0.35 -0.9 1,587,442 - CA264_06865 0.82 -0.6 1,587,447 + CA264_06865 0.83 -0.4 1,587,447 + CA264_06865 0.83 +0.2 1,587,447 + CA264_06865 0.83 -1.2 1,587,448 - CA264_06865 0.84 +0.4 1,587,448 - CA264_06865 0.84 -0.8 1,587,448 - CA264_06865 0.84 +0.2 1,587,449 + CA264_06865 0.84 +0.7 1,587,449 + CA264_06865 0.84 +0.7 1,587,450 - CA264_06865 0.84 +0.2 1,587,450 - CA264_06865 0.84 -1.1 1,587,450 - CA264_06865 0.84 -1.2 1,587,450 - CA264_06865 0.84 +0.2 1,587,497 + -1.7 1,587,571 + +0.8 1,587,575 + +0.8 1,587,576 - -0.1 1,587,576 - -0.8 1,587,577 + -0.9 1,587,717 - CA264_06870 0.17 +0.4 1,587,732 + CA264_06870 0.19 -0.5 1,587,733 - CA264_06870 0.19 +0.5 1,587,816 + CA264_06870 0.28 -0.2 1,587,826 + CA264_06870 0.29 +0.1 1,587,826 + CA264_06870 0.29 -0.1 1,587,826 + CA264_06870 0.29 -0.3 1,587,827 - CA264_06870 0.29 +0.4 1,587,877 + CA264_06870 0.34 +1.5 1,587,878 - CA264_06870 0.35 -1.4
Or see this region's nucleotide sequence