Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05900 and CA264_05905 are separated by 72 nucleotides CA264_05905 and CA264_05910 are separated by 470 nucleotides CA264_05910 and CA264_05915 are separated by 669 nucleotides
CA264_05900: CA264_05900 - aminoacetone oxidase family FAD-binding enzyme, at 1,373,098 to 1,374,333
_05900
CA264_05905: CA264_05905 - hypothetical protein, at 1,374,406 to 1,374,858
_05905
CA264_05910: CA264_05910 - RNA helicase, at 1,375,329 to 1,377,149
_05910
CA264_05915: CA264_05915 - hypothetical protein, at 1,377,819 to 1,378,358
_05915
Position (kb)
1375
1376
1377
1378 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1374.374 kb on + strand at 1374.376 kb on + strand at 1374.376 kb on + strand at 1374.376 kb on + strand at 1374.376 kb on + strand at 1374.376 kb on + strand at 1374.376 kb on + strand at 1374.377 kb on - strand at 1374.377 kb on - strand at 1374.377 kb on - strand at 1374.381 kb on + strand at 1374.382 kb on - strand at 1374.390 kb on + strand at 1374.390 kb on + strand at 1374.391 kb on - strand at 1374.393 kb on + strand at 1374.393 kb on + strand at 1374.405 kb on + strand at 1374.425 kb on + strand at 1374.433 kb on - strand at 1374.460 kb on - strand, within CA264_05905 at 1374.460 kb on - strand, within CA264_05905 at 1374.460 kb on - strand, within CA264_05905 at 1374.480 kb on + strand, within CA264_05905 at 1374.480 kb on + strand, within CA264_05905 at 1374.480 kb on + strand, within CA264_05905 at 1374.480 kb on + strand, within CA264_05905 at 1374.480 kb on + strand, within CA264_05905 at 1374.481 kb on - strand, within CA264_05905 at 1374.481 kb on - strand, within CA264_05905 at 1374.481 kb on - strand, within CA264_05905 at 1374.535 kb on + strand, within CA264_05905 at 1374.535 kb on + strand, within CA264_05905 at 1374.726 kb on + strand, within CA264_05905 at 1374.727 kb on - strand, within CA264_05905 at 1374.794 kb on - strand, within CA264_05905 at 1374.802 kb on - strand, within CA264_05905 at 1374.846 kb on + strand at 1374.867 kb on - strand at 1374.867 kb on - strand at 1374.869 kb on + strand at 1374.875 kb on + strand at 1374.944 kb on + strand at 1374.944 kb on + strand at 1374.945 kb on - strand at 1375.061 kb on + strand at 1375.062 kb on - strand at 1375.069 kb on + strand at 1375.069 kb on + strand at 1375.069 kb on + strand at 1375.116 kb on + strand at 1375.133 kb on - strand at 1375.138 kb on - strand at 1375.155 kb on - strand at 1375.191 kb on + strand at 1375.192 kb on - strand at 1375.330 kb on + strand at 1375.331 kb on - strand at 1375.601 kb on - strand, within CA264_05910 at 1375.675 kb on + strand, within CA264_05910 at 1376.428 kb on + strand, within CA264_05910 at 1376.429 kb on - strand, within CA264_05910 at 1376.856 kb on - strand, within CA264_05910 at 1377.162 kb on + strand at 1377.171 kb on + strand at 1377.171 kb on + strand at 1377.209 kb on + strand at 1377.212 kb on - strand at 1377.227 kb on - strand at 1377.240 kb on + strand at 1377.241 kb on - strand at 1377.257 kb on + strand at 1377.258 kb on - strand at 1377.273 kb on + strand at 1377.323 kb on + strand at 1377.328 kb on + strand at 1377.345 kb on - strand at 1377.598 kb on + strand at 1377.598 kb on + strand at 1377.603 kb on + strand at 1377.604 kb on - strand at 1377.621 kb on + strand at 1377.627 kb on + strand at 1377.628 kb on - strand at 1377.630 kb on + strand at 1377.630 kb on + strand at 1377.631 kb on - strand at 1377.643 kb on - strand at 1377.652 kb on - strand at 1377.775 kb on - strand at 1377.780 kb on + strand at 1377.780 kb on + strand at 1377.805 kb on + strand at 1377.813 kb on + strand at 1377.818 kb on + strand at 1377.824 kb on - strand at 1377.867 kb on - strand at 1378.015 kb on - strand, within CA264_05915 at 1378.019 kb on + strand, within CA264_05915 at 1378.095 kb on + strand, within CA264_05915 at 1378.096 kb on - strand, within CA264_05915
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,374,374 + -0.5 1,374,376 + +0.1 1,374,376 + +0.3 1,374,376 + +0.4 1,374,376 + -0.5 1,374,376 + +0.1 1,374,376 + -0.1 1,374,377 - -0.2 1,374,377 - -0.8 1,374,377 - -1.9 1,374,381 + -0.3 1,374,382 - -0.1 1,374,390 + +0.1 1,374,390 + +0.4 1,374,391 - +0.1 1,374,393 + -1.0 1,374,393 + +0.3 1,374,405 + -0.2 1,374,425 + +0.5 1,374,433 - -0.1 1,374,460 - CA264_05905 0.12 +0.1 1,374,460 - CA264_05905 0.12 +0.4 1,374,460 - CA264_05905 0.12 -1.3 1,374,480 + CA264_05905 0.16 +0.3 1,374,480 + CA264_05905 0.16 +0.3 1,374,480 + CA264_05905 0.16 -0.8 1,374,480 + CA264_05905 0.16 +0.1 1,374,480 + CA264_05905 0.16 +1.8 1,374,481 - CA264_05905 0.17 -0.5 1,374,481 - CA264_05905 0.17 -0.2 1,374,481 - CA264_05905 0.17 +1.4 1,374,535 + CA264_05905 0.28 -0.3 1,374,535 + CA264_05905 0.28 -0.6 1,374,726 + CA264_05905 0.71 -0.4 1,374,727 - CA264_05905 0.71 -0.2 1,374,794 - CA264_05905 0.86 -0.7 1,374,802 - CA264_05905 0.87 +1.2 1,374,846 + -0.6 1,374,867 - +0.5 1,374,867 - -0.3 1,374,869 + +0.2 1,374,875 + +0.2 1,374,944 + -0.1 1,374,944 + +0.1 1,374,945 - -0.9 1,375,061 + +0.1 1,375,062 - +0.2 1,375,069 + +0.8 1,375,069 + -0.3 1,375,069 + +0.1 1,375,116 + -0.4 1,375,133 - -0.3 1,375,138 - -0.3 1,375,155 - +0.5 1,375,191 + -0.3 1,375,192 - +0.5 1,375,330 + +0.1 1,375,331 - -1.8 1,375,601 - CA264_05910 0.15 -0.7 1,375,675 + CA264_05910 0.19 -0.3 1,376,428 + CA264_05910 0.60 -0.4 1,376,429 - CA264_05910 0.60 -1.6 1,376,856 - CA264_05910 0.84 +0.2 1,377,162 + +0.2 1,377,171 + +0.9 1,377,171 + +0.3 1,377,209 + +0.8 1,377,212 - +0.0 1,377,227 - -0.1 1,377,240 + -0.1 1,377,241 - -1.4 1,377,257 + -0.7 1,377,258 - -0.2 1,377,273 + +0.6 1,377,323 + +0.0 1,377,328 + -0.0 1,377,345 - -0.1 1,377,598 + -0.3 1,377,598 + -0.8 1,377,603 + +0.3 1,377,604 - -0.3 1,377,621 + -0.4 1,377,627 + +0.0 1,377,628 - -0.4 1,377,630 + +0.4 1,377,630 + -0.6 1,377,631 - -0.1 1,377,643 - +0.8 1,377,652 - +0.9 1,377,775 - +0.2 1,377,780 + -0.4 1,377,780 + +0.5 1,377,805 + -0.9 1,377,813 + -0.3 1,377,818 + -0.1 1,377,824 - -0.3 1,377,867 - -0.3 1,378,015 - CA264_05915 0.36 -0.3 1,378,019 + CA264_05915 0.37 +0.1 1,378,095 + CA264_05915 0.51 -0.2 1,378,096 - CA264_05915 0.51 +0.2
Or see this region's nucleotide sequence