Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05525 and CA264_05530 are separated by 246 nucleotides CA264_05530 and CA264_05535 are separated by 327 nucleotides
CA264_05525: CA264_05525 - oxidoreductase, at 1,282,733 to 1,283,794
_05525
CA264_05530: CA264_05530 - phosphoenolpyruvate carboxylase, at 1,284,041 to 1,286,626
_05530
CA264_05535: CA264_05535 - hypothetical protein, at 1,286,954 to 1,288,087
_05535
Position (kb)
1284
1285
1286
1287 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1283.041 kb on + strand, within CA264_05525 at 1283.099 kb on - strand, within CA264_05525 at 1283.140 kb on + strand, within CA264_05525 at 1283.199 kb on - strand, within CA264_05525 at 1283.237 kb on + strand, within CA264_05525 at 1283.262 kb on - strand, within CA264_05525 at 1283.262 kb on - strand, within CA264_05525 at 1283.309 kb on + strand, within CA264_05525 at 1283.310 kb on - strand, within CA264_05525 at 1283.349 kb on - strand, within CA264_05525 at 1283.384 kb on - strand, within CA264_05525 at 1283.396 kb on - strand, within CA264_05525 at 1283.424 kb on + strand, within CA264_05525 at 1283.426 kb on + strand, within CA264_05525 at 1283.495 kb on - strand, within CA264_05525 at 1283.507 kb on + strand, within CA264_05525 at 1283.508 kb on - strand, within CA264_05525 at 1283.576 kb on + strand, within CA264_05525 at 1283.577 kb on - strand, within CA264_05525 at 1283.725 kb on + strand at 1283.780 kb on + strand at 1283.812 kb on - strand at 1283.827 kb on + strand at 1283.828 kb on - strand at 1283.828 kb on - strand at 1283.832 kb on + strand at 1283.839 kb on + strand at 1283.840 kb on - strand at 1283.866 kb on + strand at 1283.919 kb on + strand at 1283.920 kb on - strand at 1283.995 kb on - strand at 1283.997 kb on + strand at 1283.997 kb on + strand at 1284.052 kb on - strand at 1284.061 kb on + strand at 1284.062 kb on - strand at 1284.062 kb on - strand at 1284.062 kb on - strand at 1284.062 kb on - strand at 1284.096 kb on + strand at 1284.097 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.117 kb on - strand at 1284.267 kb on - strand at 1284.267 kb on - strand at 1284.568 kb on + strand, within CA264_05530 at 1284.569 kb on - strand, within CA264_05530 at 1284.686 kb on + strand, within CA264_05530 at 1284.870 kb on - strand, within CA264_05530 at 1284.955 kb on + strand, within CA264_05530 at 1284.956 kb on - strand, within CA264_05530 at 1284.959 kb on - strand, within CA264_05530 at 1285.066 kb on - strand, within CA264_05530 at 1285.113 kb on - strand, within CA264_05530 at 1285.173 kb on + strand, within CA264_05530 at 1285.315 kb on - strand, within CA264_05530 at 1285.341 kb on - strand, within CA264_05530 at 1285.368 kb on - strand, within CA264_05530 at 1285.413 kb on - strand, within CA264_05530 at 1285.413 kb on - strand, within CA264_05530 at 1285.484 kb on - strand, within CA264_05530 at 1285.494 kb on + strand, within CA264_05530 at 1285.526 kb on + strand, within CA264_05530 at 1285.526 kb on + strand, within CA264_05530 at 1285.540 kb on - strand, within CA264_05530 at 1285.540 kb on - strand, within CA264_05530 at 1285.540 kb on - strand, within CA264_05530 at 1285.541 kb on + strand, within CA264_05530 at 1285.607 kb on - strand, within CA264_05530 at 1285.643 kb on + strand, within CA264_05530 at 1285.823 kb on - strand, within CA264_05530 at 1285.858 kb on + strand, within CA264_05530 at 1285.859 kb on - strand, within CA264_05530 at 1286.024 kb on + strand, within CA264_05530 at 1286.024 kb on + strand, within CA264_05530 at 1286.026 kb on + strand, within CA264_05530 at 1286.026 kb on + strand, within CA264_05530 at 1286.045 kb on + strand, within CA264_05530 at 1286.045 kb on + strand, within CA264_05530 at 1286.097 kb on + strand, within CA264_05530 at 1286.127 kb on - strand, within CA264_05530 at 1286.127 kb on - strand, within CA264_05530 at 1286.238 kb on - strand, within CA264_05530 at 1286.238 kb on - strand, within CA264_05530 at 1286.238 kb on - strand, within CA264_05530 at 1286.251 kb on - strand, within CA264_05530 at 1286.252 kb on + strand, within CA264_05530 at 1286.252 kb on + strand, within CA264_05530 at 1286.252 kb on + strand, within CA264_05530 at 1286.258 kb on - strand, within CA264_05530 at 1286.273 kb on - strand, within CA264_05530 at 1286.339 kb on + strand, within CA264_05530 at 1286.339 kb on + strand, within CA264_05530 at 1286.360 kb on - strand, within CA264_05530 at 1286.372 kb on + strand at 1286.372 kb on + strand at 1286.372 kb on + strand at 1286.564 kb on + strand at 1286.575 kb on - strand at 1286.575 kb on - strand at 1286.575 kb on - strand at 1286.686 kb on - strand at 1286.739 kb on - strand at 1286.791 kb on + strand at 1286.795 kb on + strand at 1286.921 kb on + strand at 1286.995 kb on + strand at 1286.995 kb on + strand at 1287.096 kb on + strand, within CA264_05535 at 1287.096 kb on + strand, within CA264_05535 at 1287.145 kb on + strand, within CA264_05535 at 1287.145 kb on + strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.146 kb on - strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.150 kb on + strand, within CA264_05535 at 1287.151 kb on - strand, within CA264_05535 at 1287.151 kb on - strand, within CA264_05535 at 1287.195 kb on + strand, within CA264_05535 at 1287.214 kb on + strand, within CA264_05535 at 1287.216 kb on + strand, within CA264_05535 at 1287.217 kb on - strand, within CA264_05535 at 1287.262 kb on - strand, within CA264_05535 at 1287.405 kb on + strand, within CA264_05535 at 1287.405 kb on + strand, within CA264_05535 at 1287.405 kb on + strand, within CA264_05535 at 1287.516 kb on - strand, within CA264_05535 at 1287.528 kb on + strand, within CA264_05535 at 1287.528 kb on + strand, within CA264_05535 at 1287.571 kb on - strand, within CA264_05535 at 1287.592 kb on - strand, within CA264_05535
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,283,041 + CA264_05525 0.29 -1.5 1,283,099 - CA264_05525 0.34 -0.9 1,283,140 + CA264_05525 0.38 -1.2 1,283,199 - CA264_05525 0.44 +0.1 1,283,237 + CA264_05525 0.47 -1.2 1,283,262 - CA264_05525 0.50 +0.1 1,283,262 - CA264_05525 0.50 -1.8 1,283,309 + CA264_05525 0.54 +1.2 1,283,310 - CA264_05525 0.54 +0.8 1,283,349 - CA264_05525 0.58 -1.3 1,283,384 - CA264_05525 0.61 -2.4 1,283,396 - CA264_05525 0.62 -1.0 1,283,424 + CA264_05525 0.65 -2.1 1,283,426 + CA264_05525 0.65 -1.1 1,283,495 - CA264_05525 0.72 -0.3 1,283,507 + CA264_05525 0.73 -0.2 1,283,508 - CA264_05525 0.73 -1.0 1,283,576 + CA264_05525 0.79 -0.3 1,283,577 - CA264_05525 0.79 -1.4 1,283,725 + -1.3 1,283,780 + -0.3 1,283,812 - -0.0 1,283,827 + +1.5 1,283,828 - -0.3 1,283,828 - -0.6 1,283,832 + -0.5 1,283,839 + -0.6 1,283,840 - -1.1 1,283,866 + -0.2 1,283,919 + -0.6 1,283,920 - -0.2 1,283,995 - -1.4 1,283,997 + -2.1 1,283,997 + +0.3 1,284,052 - +1.8 1,284,061 + +0.0 1,284,062 - -0.8 1,284,062 - +0.1 1,284,062 - +0.1 1,284,062 - -0.1 1,284,096 + +0.3 1,284,097 - -0.2 1,284,117 - -0.4 1,284,117 - +1.5 1,284,117 - +0.2 1,284,117 - +0.1 1,284,117 - -0.0 1,284,117 - +0.1 1,284,267 - -0.3 1,284,267 - -0.2 1,284,568 + CA264_05530 0.20 +0.5 1,284,569 - CA264_05530 0.20 -0.8 1,284,686 + CA264_05530 0.25 +0.2 1,284,870 - CA264_05530 0.32 -0.8 1,284,955 + CA264_05530 0.35 +0.1 1,284,956 - CA264_05530 0.35 +0.9 1,284,959 - CA264_05530 0.35 +0.4 1,285,066 - CA264_05530 0.40 -0.2 1,285,113 - CA264_05530 0.41 +0.8 1,285,173 + CA264_05530 0.44 -0.4 1,285,315 - CA264_05530 0.49 +0.6 1,285,341 - CA264_05530 0.50 +1.2 1,285,368 - CA264_05530 0.51 -0.4 1,285,413 - CA264_05530 0.53 -1.9 1,285,413 - CA264_05530 0.53 +0.2 1,285,484 - CA264_05530 0.56 +0.4 1,285,494 + CA264_05530 0.56 +0.2 1,285,526 + CA264_05530 0.57 -0.0 1,285,526 + CA264_05530 0.57 +0.8 1,285,540 - CA264_05530 0.58 +0.4 1,285,540 - CA264_05530 0.58 +0.2 1,285,540 - CA264_05530 0.58 +0.2 1,285,541 + CA264_05530 0.58 +2.0 1,285,607 - CA264_05530 0.61 -0.6 1,285,643 + CA264_05530 0.62 +0.2 1,285,823 - CA264_05530 0.69 +0.5 1,285,858 + CA264_05530 0.70 +0.7 1,285,859 - CA264_05530 0.70 -0.9 1,286,024 + CA264_05530 0.77 -0.1 1,286,024 + CA264_05530 0.77 -0.5 1,286,026 + CA264_05530 0.77 -0.1 1,286,026 + CA264_05530 0.77 +1.7 1,286,045 + CA264_05530 0.77 -0.3 1,286,045 + CA264_05530 0.77 +0.4 1,286,097 + CA264_05530 0.80 +0.0 1,286,127 - CA264_05530 0.81 +0.3 1,286,127 - CA264_05530 0.81 +1.6 1,286,238 - CA264_05530 0.85 -1.1 1,286,238 - CA264_05530 0.85 -0.0 1,286,238 - CA264_05530 0.85 +0.1 1,286,251 - CA264_05530 0.85 +1.2 1,286,252 + CA264_05530 0.85 -0.5 1,286,252 + CA264_05530 0.85 +0.1 1,286,252 + CA264_05530 0.85 -0.0 1,286,258 - CA264_05530 0.86 -0.3 1,286,273 - CA264_05530 0.86 -0.6 1,286,339 + CA264_05530 0.89 -0.8 1,286,339 + CA264_05530 0.89 +1.6 1,286,360 - CA264_05530 0.90 +0.2 1,286,372 + +0.2 1,286,372 + -0.1 1,286,372 + +0.3 1,286,564 + -0.0 1,286,575 - +0.5 1,286,575 - -0.7 1,286,575 - -0.3 1,286,686 - -0.4 1,286,739 - +0.2 1,286,791 + -1.2 1,286,795 + +0.3 1,286,921 + +0.1 1,286,995 + -0.3 1,286,995 + -0.0 1,287,096 + CA264_05535 0.13 +0.2 1,287,096 + CA264_05535 0.13 +0.2 1,287,145 + CA264_05535 0.17 -0.6 1,287,145 + CA264_05535 0.17 +2.0 1,287,146 - CA264_05535 0.17 +0.1 1,287,146 - CA264_05535 0.17 +1.7 1,287,146 - CA264_05535 0.17 +0.0 1,287,146 - CA264_05535 0.17 -0.6 1,287,146 - CA264_05535 0.17 -0.2 1,287,146 - CA264_05535 0.17 +0.3 1,287,150 + CA264_05535 0.17 -0.3 1,287,150 + CA264_05535 0.17 -0.1 1,287,150 + CA264_05535 0.17 -0.0 1,287,150 + CA264_05535 0.17 -0.2 1,287,151 - CA264_05535 0.17 +0.1 1,287,151 - CA264_05535 0.17 -0.5 1,287,195 + CA264_05535 0.21 -0.5 1,287,214 + CA264_05535 0.23 -0.6 1,287,216 + CA264_05535 0.23 -1.2 1,287,217 - CA264_05535 0.23 -0.1 1,287,262 - CA264_05535 0.27 -1.3 1,287,405 + CA264_05535 0.40 -0.8 1,287,405 + CA264_05535 0.40 +0.5 1,287,405 + CA264_05535 0.40 -0.3 1,287,516 - CA264_05535 0.50 +0.2 1,287,528 + CA264_05535 0.51 -0.0 1,287,528 + CA264_05535 0.51 -0.2 1,287,571 - CA264_05535 0.54 -0.4 1,287,592 - CA264_05535 0.56 +0.6
Or see this region's nucleotide sequence