Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03635 and CA264_03640 are separated by 195 nucleotides CA264_03640 and CA264_03645 are separated by 183 nucleotides CA264_03645 and CA264_03650 are separated by 20 nucleotides
CA264_03635: CA264_03635 - DoxX family protein, at 848,214 to 848,666
_03635
CA264_03640: CA264_03640 - TetR family transcriptional regulator, at 848,862 to 849,434
_03640
CA264_03645: CA264_03645 - hypothetical protein, at 849,618 to 850,949
_03645
CA264_03650: CA264_03650 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit, at 850,970 to 852,118
_03650
Position (kb)
849
850
851 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 848.692 kb on - strand at 848.695 kb on + strand at 848.696 kb on - strand at 848.696 kb on - strand at 848.696 kb on - strand at 848.699 kb on + strand at 848.700 kb on - strand at 848.700 kb on - strand at 848.700 kb on - strand at 848.700 kb on - strand at 848.707 kb on + strand at 848.707 kb on + strand at 848.809 kb on + strand at 848.810 kb on - strand at 848.810 kb on - strand at 848.818 kb on - strand at 848.939 kb on + strand, within CA264_03640 at 848.939 kb on + strand, within CA264_03640 at 848.940 kb on - strand, within CA264_03640 at 848.940 kb on - strand, within CA264_03640 at 849.113 kb on + strand, within CA264_03640 at 849.141 kb on + strand, within CA264_03640 at 849.143 kb on + strand, within CA264_03640 at 849.183 kb on - strand, within CA264_03640 at 849.183 kb on - strand, within CA264_03640 at 849.200 kb on + strand, within CA264_03640 at 849.292 kb on + strand, within CA264_03640 at 849.454 kb on + strand at 849.455 kb on - strand at 849.513 kb on + strand at 849.593 kb on - strand at 849.615 kb on + strand at 849.616 kb on - strand at 849.643 kb on + strand at 849.736 kb on + strand at 849.852 kb on + strand, within CA264_03645 at 849.853 kb on - strand, within CA264_03645 at 849.872 kb on + strand, within CA264_03645 at 849.873 kb on - strand, within CA264_03645 at 849.899 kb on + strand, within CA264_03645 at 849.900 kb on - strand, within CA264_03645 at 849.900 kb on - strand, within CA264_03645 at 849.908 kb on + strand, within CA264_03645 at 849.924 kb on + strand, within CA264_03645 at 850.058 kb on - strand, within CA264_03645 at 850.146 kb on + strand, within CA264_03645 at 850.167 kb on + strand, within CA264_03645 at 850.167 kb on + strand, within CA264_03645 at 850.168 kb on - strand, within CA264_03645 at 850.168 kb on - strand, within CA264_03645 at 850.183 kb on + strand, within CA264_03645 at 850.278 kb on + strand, within CA264_03645 at 850.363 kb on + strand, within CA264_03645 at 850.363 kb on + strand, within CA264_03645 at 850.489 kb on - strand, within CA264_03645 at 850.498 kb on - strand, within CA264_03645 at 850.509 kb on + strand, within CA264_03645 at 850.509 kb on + strand, within CA264_03645 at 850.537 kb on - strand, within CA264_03645 at 850.609 kb on - strand at 850.660 kb on + strand, within CA264_03645 at 850.661 kb on - strand, within CA264_03645 at 850.715 kb on + strand, within CA264_03645 at 850.725 kb on + strand, within CA264_03645 at 850.725 kb on + strand, within CA264_03645 at 850.776 kb on + strand, within CA264_03645 at 850.777 kb on - strand, within CA264_03645 at 850.818 kb on + strand at 850.819 kb on - strand at 850.870 kb on - strand at 850.872 kb on + strand at 850.872 kb on + strand at 850.873 kb on - strand at 850.933 kb on + strand at 850.933 kb on + strand at 850.963 kb on - strand at 850.979 kb on - strand at 850.982 kb on + strand at 851.018 kb on - strand at 851.020 kb on - strand at 851.131 kb on + strand, within CA264_03650 at 851.131 kb on + strand, within CA264_03650 at 851.131 kb on + strand, within CA264_03650 at 851.207 kb on + strand, within CA264_03650 at 851.271 kb on - strand, within CA264_03650 at 851.397 kb on + strand, within CA264_03650 at 851.398 kb on - strand, within CA264_03650 at 851.398 kb on - strand, within CA264_03650 at 851.402 kb on + strand, within CA264_03650 at 851.402 kb on + strand, within CA264_03650 at 851.621 kb on - strand, within CA264_03650 at 851.647 kb on - strand, within CA264_03650 at 851.712 kb on - strand, within CA264_03650 at 851.773 kb on + strand, within CA264_03650 at 851.774 kb on - strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.912 kb on + strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.913 kb on - strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.918 kb on + strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.919 kb on - strand, within CA264_03650 at 851.922 kb on + strand, within CA264_03650 at 851.922 kb on + strand, within CA264_03650
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 848,692 - -0.1 848,695 + -1.2 848,696 - -1.8 848,696 - -1.1 848,696 - -0.1 848,699 + +0.2 848,700 - +0.4 848,700 - +1.9 848,700 - +0.2 848,700 - +0.2 848,707 + -1.3 848,707 + -2.6 848,809 + +0.2 848,810 - +0.2 848,810 - -0.4 848,818 - -0.1 848,939 + CA264_03640 0.13 -2.1 848,939 + CA264_03640 0.13 -1.0 848,940 - CA264_03640 0.14 +0.5 848,940 - CA264_03640 0.14 +0.4 849,113 + CA264_03640 0.44 -1.6 849,141 + CA264_03640 0.49 -1.4 849,143 + CA264_03640 0.49 -2.2 849,183 - CA264_03640 0.56 +0.7 849,183 - CA264_03640 0.56 -0.4 849,200 + CA264_03640 0.59 -1.8 849,292 + CA264_03640 0.75 -2.5 849,454 + -3.2 849,455 - -1.0 849,513 + +0.4 849,593 - +0.1 849,615 + +0.0 849,616 - +0.0 849,643 + -0.8 849,736 + -1.3 849,852 + CA264_03645 0.18 -1.1 849,853 - CA264_03645 0.18 +0.5 849,872 + CA264_03645 0.19 -0.4 849,873 - CA264_03645 0.19 -0.1 849,899 + CA264_03645 0.21 -2.7 849,900 - CA264_03645 0.21 -0.9 849,900 - CA264_03645 0.21 -0.5 849,908 + CA264_03645 0.22 +1.0 849,924 + CA264_03645 0.23 -1.1 850,058 - CA264_03645 0.33 +0.2 850,146 + CA264_03645 0.40 -0.4 850,167 + CA264_03645 0.41 -1.3 850,167 + CA264_03645 0.41 -1.1 850,168 - CA264_03645 0.41 -0.4 850,168 - CA264_03645 0.41 +1.0 850,183 + CA264_03645 0.42 -0.4 850,278 + CA264_03645 0.50 -1.1 850,363 + CA264_03645 0.56 -1.3 850,363 + CA264_03645 0.56 +0.3 850,489 - CA264_03645 0.65 -0.1 850,498 - CA264_03645 0.66 -0.4 850,509 + CA264_03645 0.67 -0.6 850,509 + CA264_03645 0.67 -1.5 850,537 - CA264_03645 0.69 +0.3 850,609 - +1.2 850,660 + CA264_03645 0.78 -0.4 850,661 - CA264_03645 0.78 +0.6 850,715 + CA264_03645 0.82 -0.4 850,725 + CA264_03645 0.83 -1.0 850,725 + CA264_03645 0.83 -0.9 850,776 + CA264_03645 0.87 -2.3 850,777 - CA264_03645 0.87 -1.0 850,818 + -3.4 850,819 - -0.6 850,870 - -0.1 850,872 + -1.4 850,872 + -0.4 850,873 - -0.3 850,933 + -1.8 850,933 + -2.0 850,963 - +0.3 850,979 - -0.4 850,982 + +0.7 851,018 - -0.5 851,020 - -0.3 851,131 + CA264_03650 0.14 -1.3 851,131 + CA264_03650 0.14 -2.4 851,131 + CA264_03650 0.14 -0.7 851,207 + CA264_03650 0.21 -0.1 851,271 - CA264_03650 0.26 -0.9 851,397 + CA264_03650 0.37 +1.3 851,398 - CA264_03650 0.37 +0.1 851,398 - CA264_03650 0.37 +0.9 851,402 + CA264_03650 0.38 +0.4 851,402 + CA264_03650 0.38 -0.2 851,621 - CA264_03650 0.57 +0.2 851,647 - CA264_03650 0.59 -0.6 851,712 - CA264_03650 0.65 -0.1 851,773 + CA264_03650 0.70 +0.0 851,774 - CA264_03650 0.70 +0.2 851,912 + CA264_03650 0.82 -1.1 851,912 + CA264_03650 0.82 +1.2 851,912 + CA264_03650 0.82 -1.0 851,912 + CA264_03650 0.82 -0.7 851,912 + CA264_03650 0.82 -0.0 851,913 - CA264_03650 0.82 -0.7 851,913 - CA264_03650 0.82 +0.2 851,913 - CA264_03650 0.82 +0.2 851,913 - CA264_03650 0.82 -1.3 851,913 - CA264_03650 0.82 +1.2 851,918 + CA264_03650 0.83 -0.8 851,918 + CA264_03650 0.83 +0.2 851,918 + CA264_03650 0.83 +1.5 851,919 - CA264_03650 0.83 -0.3 851,919 - CA264_03650 0.83 -0.1 851,919 - CA264_03650 0.83 -0.6 851,919 - CA264_03650 0.83 +0.0 851,919 - CA264_03650 0.83 +0.6 851,922 + CA264_03650 0.83 -1.0 851,922 + CA264_03650 0.83 -1.2
Or see this region's nucleotide sequence