Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02930 and CA264_02935 are separated by 40 nucleotides CA264_02935 and CA264_02940 are separated by 53 nucleotides CA264_02940 and CA264_02945 are separated by 132 nucleotides CA264_02945 and CA264_02950 are separated by 9 nucleotides
CA264_02930: CA264_02930 - copper-translocating P-type ATPase, at 668,245 to 670,479
_02930
CA264_02935: CA264_02935 - hypothetical protein, at 670,520 to 670,729
_02935
CA264_02940: CA264_02940 - hypothetical protein, at 670,783 to 671,175
_02940
CA264_02945: CA264_02945 - hypothetical protein, at 671,308 to 672,327
_02945
CA264_02950: CA264_02950 - T9SS C-terminal target domain-containing protein, at 672,337 to 678,201
_02950
Position (kb) 671
672
673 Strain fitness (log2 ratio) -2
-1
0
1
2 at 670.653 kb on + strand, within CA264_02935 at 670.727 kb on + strand at 670.739 kb on + strand at 670.739 kb on + strand at 670.740 kb on - strand at 670.740 kb on - strand at 670.741 kb on + strand at 670.741 kb on + strand at 670.742 kb on - strand at 670.742 kb on - strand at 670.742 kb on - strand at 670.742 kb on - strand at 670.745 kb on + strand at 670.745 kb on + strand at 670.745 kb on + strand at 670.746 kb on - strand at 670.754 kb on - strand at 670.779 kb on - strand at 670.822 kb on + strand at 670.880 kb on + strand, within CA264_02940 at 670.880 kb on + strand, within CA264_02940 at 670.915 kb on + strand, within CA264_02940 at 670.916 kb on - strand, within CA264_02940 at 670.916 kb on - strand, within CA264_02940 at 670.916 kb on - strand, within CA264_02940 at 670.973 kb on + strand, within CA264_02940 at 670.973 kb on + strand, within CA264_02940 at 670.973 kb on + strand, within CA264_02940 at 670.973 kb on + strand, within CA264_02940 at 670.973 kb on + strand, within CA264_02940 at 670.973 kb on + strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.974 kb on - strand, within CA264_02940 at 670.991 kb on + strand, within CA264_02940 at 670.991 kb on + strand, within CA264_02940 at 671.053 kb on + strand, within CA264_02940 at 671.054 kb on - strand, within CA264_02940 at 671.073 kb on - strand, within CA264_02940 at 671.108 kb on + strand, within CA264_02940 at 671.108 kb on + strand, within CA264_02940 at 671.108 kb on + strand, within CA264_02940 at 671.109 kb on - strand, within CA264_02940 at 671.143 kb on + strand at 671.144 kb on - strand at 671.144 kb on - strand at 671.144 kb on - strand at 671.175 kb on + strand at 671.175 kb on + strand at 671.175 kb on + strand at 671.176 kb on - strand at 671.176 kb on - strand at 671.177 kb on + strand at 671.178 kb on - strand at 671.178 kb on - strand at 671.178 kb on - strand at 671.188 kb on + strand at 671.188 kb on + strand at 671.188 kb on + strand at 671.191 kb on - strand at 671.267 kb on - strand at 671.267 kb on - strand at 671.300 kb on + strand at 671.301 kb on - strand at 671.301 kb on - strand at 671.331 kb on + strand at 671.642 kb on + strand, within CA264_02945 at 671.643 kb on - strand, within CA264_02945 at 671.888 kb on - strand, within CA264_02945 at 671.936 kb on + strand, within CA264_02945 at 671.979 kb on + strand, within CA264_02945 at 672.083 kb on + strand, within CA264_02945 at 672.084 kb on - strand, within CA264_02945 at 672.128 kb on + strand, within CA264_02945 at 672.191 kb on + strand, within CA264_02945 at 672.231 kb on + strand at 672.231 kb on + strand at 672.231 kb on + strand at 672.398 kb on + strand at 672.398 kb on + strand at 672.746 kb on + strand at 672.747 kb on - strand at 672.890 kb on + strand at 673.030 kb on + strand, within CA264_02950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 670,653 + CA264_02935 0.63 +0.3 670,727 + -0.2 670,739 + +0.2 670,739 + +0.0 670,740 - +1.2 670,740 - -0.0 670,741 + +0.6 670,741 + -0.3 670,742 - -0.7 670,742 - -0.1 670,742 - +0.3 670,742 - +0.2 670,745 + -0.0 670,745 + -2.0 670,745 + +0.0 670,746 - -0.7 670,754 - +0.1 670,779 - +0.6 670,822 + -0.2 670,880 + CA264_02940 0.25 -0.2 670,880 + CA264_02940 0.25 -0.8 670,915 + CA264_02940 0.34 -0.9 670,916 - CA264_02940 0.34 -0.7 670,916 - CA264_02940 0.34 +1.1 670,916 - CA264_02940 0.34 -0.1 670,973 + CA264_02940 0.48 -0.4 670,973 + CA264_02940 0.48 -1.0 670,973 + CA264_02940 0.48 +1.1 670,973 + CA264_02940 0.48 +0.2 670,973 + CA264_02940 0.48 -0.2 670,973 + CA264_02940 0.48 +0.0 670,974 - CA264_02940 0.49 +0.5 670,974 - CA264_02940 0.49 +0.1 670,974 - CA264_02940 0.49 +1.2 670,974 - CA264_02940 0.49 -0.0 670,974 - CA264_02940 0.49 +0.2 670,974 - CA264_02940 0.49 -0.0 670,974 - CA264_02940 0.49 -0.1 670,991 + CA264_02940 0.53 -0.2 670,991 + CA264_02940 0.53 +2.2 671,053 + CA264_02940 0.69 -1.2 671,054 - CA264_02940 0.69 +2.2 671,073 - CA264_02940 0.74 -0.3 671,108 + CA264_02940 0.83 +0.1 671,108 + CA264_02940 0.83 +1.8 671,108 + CA264_02940 0.83 +0.9 671,109 - CA264_02940 0.83 -0.3 671,143 + -0.2 671,144 - -0.9 671,144 - +0.3 671,144 - -0.5 671,175 + +0.1 671,175 + -1.4 671,175 + +0.3 671,176 - +1.3 671,176 - -0.1 671,177 + -0.1 671,178 - +0.1 671,178 - -0.4 671,178 - +0.6 671,188 + -0.9 671,188 + +0.6 671,188 + -0.3 671,191 - -0.8 671,267 - -0.3 671,267 - -0.4 671,300 + +0.9 671,301 - +0.4 671,301 - +1.5 671,331 + +0.6 671,642 + CA264_02945 0.33 -1.2 671,643 - CA264_02945 0.33 -0.4 671,888 - CA264_02945 0.57 -1.8 671,936 + CA264_02945 0.62 -0.3 671,979 + CA264_02945 0.66 -0.8 672,083 + CA264_02945 0.76 -1.5 672,084 - CA264_02945 0.76 -0.2 672,128 + CA264_02945 0.80 -0.9 672,191 + CA264_02945 0.87 -0.1 672,231 + +0.1 672,231 + +0.0 672,231 + -1.2 672,398 + -0.4 672,398 + -0.9 672,746 + +2.0 672,747 - -0.1 672,890 + +0.3 673,030 + CA264_02950 0.12 -0.5
Or see this region's nucleotide sequence