Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02175

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02170 and CA264_02175 are separated by 320 nucleotidesCA264_02175 and CA264_02180 are separated by 313 nucleotidesCA264_02180 and CA264_02185 are separated by 156 nucleotides CA264_02170: CA264_02170 - hypothetical protein, at 500,035 to 500,799 _02170 CA264_02175: CA264_02175 - acyl-CoA desaturase, at 501,120 to 502,232 _02175 CA264_02180: CA264_02180 - response regulator, at 502,546 to 502,914 _02180 CA264_02185: CA264_02185 - GNAT family N-acetyltransferase, at 503,071 to 503,595 _02185 Position (kb) 501 502 503Strain fitness (log2 ratio) -2 -1 0 1 2at 500.244 kb on + strand, within CA264_02170at 500.245 kb on - strand, within CA264_02170at 500.347 kb on + strand, within CA264_02170at 500.527 kb on - strand, within CA264_02170at 500.527 kb on - strand, within CA264_02170at 500.533 kb on + strand, within CA264_02170at 500.549 kb on - strand, within CA264_02170at 500.587 kb on + strand, within CA264_02170at 500.588 kb on - strand, within CA264_02170at 500.632 kb on + strand, within CA264_02170at 500.632 kb on + strand, within CA264_02170at 500.662 kb on + strand, within CA264_02170at 500.662 kb on + strand, within CA264_02170at 500.663 kb on - strand, within CA264_02170at 500.684 kb on - strand, within CA264_02170at 500.765 kb on + strandat 500.766 kb on - strandat 500.889 kb on + strandat 500.900 kb on + strandat 500.904 kb on + strandat 500.905 kb on - strandat 500.937 kb on + strandat 500.941 kb on + strandat 500.942 kb on - strandat 500.943 kb on + strandat 500.951 kb on + strandat 500.958 kb on + strandat 500.971 kb on - strandat 500.977 kb on - strandat 500.977 kb on - strandat 501.070 kb on + strandat 501.107 kb on + strandat 501.107 kb on + strandat 501.107 kb on + strandat 501.108 kb on - strandat 501.119 kb on + strandat 501.120 kb on - strandat 501.120 kb on - strandat 501.128 kb on - strandat 501.139 kb on + strandat 501.140 kb on - strandat 501.201 kb on + strandat 501.202 kb on - strandat 501.202 kb on - strandat 501.276 kb on + strand, within CA264_02175at 501.330 kb on - strand, within CA264_02175at 501.347 kb on + strand, within CA264_02175at 501.348 kb on - strand, within CA264_02175at 501.409 kb on - strand, within CA264_02175at 501.427 kb on + strand, within CA264_02175at 501.427 kb on + strand, within CA264_02175at 501.432 kb on + strand, within CA264_02175at 501.432 kb on + strand, within CA264_02175at 501.494 kb on + strand, within CA264_02175at 501.494 kb on + strand, within CA264_02175at 501.495 kb on - strand, within CA264_02175at 501.495 kb on - strand, within CA264_02175at 501.495 kb on - strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.594 kb on + strand, within CA264_02175at 501.594 kb on + strand, within CA264_02175at 501.595 kb on - strand, within CA264_02175at 501.616 kb on - strand, within CA264_02175at 501.630 kb on + strand, within CA264_02175at 501.649 kb on - strand, within CA264_02175at 501.678 kb on + strand, within CA264_02175at 501.704 kb on - strand, within CA264_02175at 501.704 kb on - strand, within CA264_02175at 501.768 kb on + strand, within CA264_02175at 501.769 kb on - strand, within CA264_02175at 501.769 kb on - strand, within CA264_02175at 501.974 kb on + strand, within CA264_02175at 502.017 kb on + strand, within CA264_02175at 502.129 kb on + strandat 502.129 kb on + strandat 502.129 kb on + strandat 502.130 kb on - strandat 502.130 kb on - strandat 502.130 kb on - strandat 502.130 kb on - strandat 502.135 kb on - strandat 502.135 kb on - strandat 502.135 kb on - strandat 502.135 kb on - strandat 502.242 kb on + strandat 502.243 kb on - strandat 502.245 kb on - strandat 502.245 kb on - strandat 502.250 kb on - strandat 502.250 kb on - strandat 502.463 kb on - strandat 502.471 kb on + strandat 502.472 kb on - strandat 502.472 kb on - strandat 502.474 kb on + strandat 502.474 kb on + strandat 502.474 kb on + strandat 502.474 kb on + strandat 502.475 kb on - strandat 502.476 kb on + strandat 502.476 kb on + strandat 502.476 kb on + strandat 502.476 kb on + strandat 502.476 kb on + strandat 502.476 kb on + strandat 502.477 kb on - strandat 502.477 kb on - strandat 502.477 kb on - strandat 502.534 kb on - strandat 502.543 kb on + strandat 502.544 kb on - strandat 502.544 kb on - strandat 502.544 kb on - strandat 502.572 kb on + strandat 502.616 kb on + strand, within CA264_02180at 502.645 kb on - strand, within CA264_02180at 502.831 kb on + strand, within CA264_02180at 502.857 kb on - strand, within CA264_02180at 502.889 kb on + strandat 502.889 kb on + strandat 502.890 kb on - strandat 502.913 kb on - strandat 502.932 kb on + strandat 502.933 kb on - strandat 502.967 kb on + strandat 503.031 kb on - strandat 503.031 kb on - strandat 503.042 kb on + strandat 503.043 kb on - strandat 503.155 kb on + strand, within CA264_02185at 503.156 kb on - strand, within CA264_02185at 503.189 kb on - strand, within CA264_02185

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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500,244 + CA264_02170 0.27 -0.3
500,245 - CA264_02170 0.27 +0.2
500,347 + CA264_02170 0.41 -0.6
500,527 - CA264_02170 0.64 -0.2
500,527 - CA264_02170 0.64 +0.0
500,533 + CA264_02170 0.65 +0.1
500,549 - CA264_02170 0.67 -0.3
500,587 + CA264_02170 0.72 +1.1
500,588 - CA264_02170 0.72 +0.2
500,632 + CA264_02170 0.78 +0.7
500,632 + CA264_02170 0.78 +0.5
500,662 + CA264_02170 0.82 -0.3
500,662 + CA264_02170 0.82 -0.0
500,663 - CA264_02170 0.82 +1.9
500,684 - CA264_02170 0.85 -0.8
500,765 + -0.0
500,766 - +0.3
500,889 + -0.1
500,900 + -0.8
500,904 + +0.3
500,905 - -0.1
500,937 + -0.2
500,941 + -0.4
500,942 - +0.1
500,943 + +0.2
500,951 + +0.2
500,958 + -1.2
500,971 - +0.4
500,977 - -0.2
500,977 - +1.5
501,070 + -0.3
501,107 + +0.8
501,107 + -0.4
501,107 + -0.0
501,108 - +0.0
501,119 + -0.4
501,120 - -1.3
501,120 - +0.1
501,128 - -0.0
501,139 + -0.5
501,140 - +1.0
501,201 + -0.5
501,202 - -0.2
501,202 - +0.4
501,276 + CA264_02175 0.14 +0.2
501,330 - CA264_02175 0.19 -1.7
501,347 + CA264_02175 0.20 -1.1
501,348 - CA264_02175 0.20 -0.0
501,409 - CA264_02175 0.26 +0.2
501,427 + CA264_02175 0.28 +0.2
501,427 + CA264_02175 0.28 +0.7
501,432 + CA264_02175 0.28 +1.1
501,432 + CA264_02175 0.28 +0.2
501,494 + CA264_02175 0.34 +0.7
501,494 + CA264_02175 0.34 +0.1
501,495 - CA264_02175 0.34 -1.3
501,495 - CA264_02175 0.34 +1.1
501,495 - CA264_02175 0.34 +0.3
501,513 + CA264_02175 0.35 -0.9
501,513 + CA264_02175 0.35 +0.1
501,513 + CA264_02175 0.35 -0.4
501,513 + CA264_02175 0.35 +0.5
501,516 - CA264_02175 0.36 -0.7
501,516 - CA264_02175 0.36 -0.3
501,516 - CA264_02175 0.36 +0.1
501,516 - CA264_02175 0.36 +0.5
501,594 + CA264_02175 0.43 -0.4
501,594 + CA264_02175 0.43 -0.1
501,595 - CA264_02175 0.43 +0.4
501,616 - CA264_02175 0.45 -0.2
501,630 + CA264_02175 0.46 -0.6
501,649 - CA264_02175 0.48 +0.2
501,678 + CA264_02175 0.50 -0.3
501,704 - CA264_02175 0.52 +0.4
501,704 - CA264_02175 0.52 +1.8
501,768 + CA264_02175 0.58 -1.9
501,769 - CA264_02175 0.58 +0.9
501,769 - CA264_02175 0.58 -1.2
501,974 + CA264_02175 0.77 -0.0
502,017 + CA264_02175 0.81 +1.3
502,129 + -0.1
502,129 + +0.5
502,129 + -0.3
502,130 - -0.3
502,130 - -0.4
502,130 - -0.3
502,130 - -0.3
502,135 - -0.4
502,135 - +0.5
502,135 - -0.1
502,135 - +1.1
502,242 + -0.2
502,243 - -1.2
502,245 - -0.3
502,245 - -0.2
502,250 - -0.2
502,250 - -0.5
502,463 - +0.3
502,471 + -0.6
502,472 - +0.3
502,472 - -0.1
502,474 + +1.1
502,474 + -1.2
502,474 + +0.2
502,474 + -1.0
502,475 - +0.2
502,476 + -0.4
502,476 + -0.1
502,476 + +0.1
502,476 + +1.5
502,476 + -0.6
502,476 + -1.3
502,477 - -0.3
502,477 - +0.7
502,477 - +0.6
502,534 - +1.1
502,543 + +0.1
502,544 - -0.7
502,544 - -0.3
502,544 - -0.5
502,572 + -0.1
502,616 + CA264_02180 0.19 +0.6
502,645 - CA264_02180 0.27 +0.6
502,831 + CA264_02180 0.77 +2.1
502,857 - CA264_02180 0.84 +0.3
502,889 + +1.0
502,889 + -0.6
502,890 - +1.3
502,913 - +0.2
502,932 + -0.8
502,933 - -0.5
502,967 + -0.2
503,031 - +0.0
503,031 - +0.3
503,042 + +0.9
503,043 - +0.2
503,155 + CA264_02185 0.16 +0.6
503,156 - CA264_02185 0.16 -0.7
503,189 - CA264_02185 0.22 +0.6

Or see this region's nucleotide sequence