Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00675 and CA264_00680 are separated by 448 nucleotides CA264_00680 and CA264_00685 are separated by 140 nucleotides CA264_00685 and CA264_00690 are separated by 55 nucleotides
CA264_00675: CA264_00675 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 147,833 to 148,459
_00675
CA264_00680: CA264_00680 - alpha/beta hydrolase, at 148,908 to 149,861
_00680
CA264_00685: CA264_00685 - hypothetical protein, at 150,002 to 150,430
_00685
CA264_00690: CA264_00690 - hypothetical protein, at 150,486 to 151,487
_00690
Position (kb)
148
149
150 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 147.912 kb on - strand, within CA264_00675 at 147.912 kb on - strand, within CA264_00675 at 148.000 kb on - strand, within CA264_00675 at 148.013 kb on - strand, within CA264_00675 at 148.013 kb on - strand, within CA264_00675 at 148.220 kb on + strand, within CA264_00675 at 148.229 kb on - strand, within CA264_00675 at 148.322 kb on + strand, within CA264_00675 at 148.323 kb on - strand, within CA264_00675 at 148.370 kb on - strand, within CA264_00675 at 148.372 kb on + strand, within CA264_00675 at 148.389 kb on + strand, within CA264_00675 at 148.457 kb on + strand at 148.478 kb on + strand at 148.479 kb on - strand at 148.507 kb on + strand at 148.507 kb on + strand at 148.508 kb on - strand at 148.511 kb on + strand at 148.512 kb on - strand at 148.738 kb on + strand at 148.738 kb on + strand at 148.749 kb on + strand at 148.792 kb on + strand at 148.793 kb on - strand at 148.793 kb on - strand at 148.794 kb on + strand at 148.794 kb on + strand at 148.795 kb on - strand at 148.795 kb on - strand at 148.795 kb on - strand at 148.795 kb on - strand at 148.798 kb on + strand at 148.799 kb on - strand at 148.799 kb on - strand at 148.893 kb on - strand at 148.909 kb on + strand at 149.024 kb on - strand, within CA264_00680 at 149.150 kb on - strand, within CA264_00680 at 149.150 kb on - strand, within CA264_00680 at 149.152 kb on + strand, within CA264_00680 at 149.152 kb on + strand, within CA264_00680 at 149.231 kb on - strand, within CA264_00680 at 149.257 kb on + strand, within CA264_00680 at 149.258 kb on - strand, within CA264_00680 at 149.258 kb on - strand, within CA264_00680 at 149.314 kb on + strand, within CA264_00680 at 149.314 kb on + strand, within CA264_00680 at 149.315 kb on - strand, within CA264_00680 at 149.316 kb on + strand, within CA264_00680 at 149.317 kb on - strand, within CA264_00680 at 149.419 kb on + strand, within CA264_00680 at 149.420 kb on - strand, within CA264_00680 at 149.579 kb on - strand, within CA264_00680 at 149.634 kb on - strand, within CA264_00680 at 149.636 kb on + strand, within CA264_00680 at 149.637 kb on - strand, within CA264_00680 at 149.637 kb on - strand, within CA264_00680 at 149.638 kb on + strand, within CA264_00680 at 149.824 kb on + strand at 149.867 kb on - strand at 149.883 kb on - strand at 149.959 kb on - strand at 149.996 kb on - strand at 150.001 kb on + strand at 150.002 kb on - strand at 150.031 kb on - strand at 150.053 kb on - strand, within CA264_00685 at 150.058 kb on + strand, within CA264_00685 at 150.058 kb on + strand, within CA264_00685 at 150.161 kb on + strand, within CA264_00685 at 150.162 kb on - strand, within CA264_00685 at 150.248 kb on + strand, within CA264_00685 at 150.357 kb on + strand, within CA264_00685 at 150.378 kb on + strand, within CA264_00685 at 150.379 kb on - strand, within CA264_00685 at 150.379 kb on - strand, within CA264_00685 at 150.379 kb on - strand, within CA264_00685 at 150.379 kb on - strand, within CA264_00685 at 150.393 kb on + strand at 150.394 kb on - strand at 150.394 kb on - strand at 150.425 kb on - strand at 150.429 kb on - strand at 150.429 kb on - strand at 150.465 kb on + strand at 150.508 kb on - strand at 150.571 kb on + strand at 150.692 kb on - strand, within CA264_00690 at 150.695 kb on - strand, within CA264_00690 at 150.760 kb on + strand, within CA264_00690 at 150.765 kb on - strand, within CA264_00690 at 150.822 kb on - strand, within CA264_00690
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 147,912 - CA264_00675 0.13 -0.4 147,912 - CA264_00675 0.13 +1.0 148,000 - CA264_00675 0.27 -0.4 148,013 - CA264_00675 0.29 -1.4 148,013 - CA264_00675 0.29 -0.2 148,220 + CA264_00675 0.62 -1.0 148,229 - CA264_00675 0.63 -0.3 148,322 + CA264_00675 0.78 -0.1 148,323 - CA264_00675 0.78 -0.0 148,370 - CA264_00675 0.86 -0.5 148,372 + CA264_00675 0.86 -1.4 148,389 + CA264_00675 0.89 -0.1 148,457 + -0.2 148,478 + -0.6 148,479 - -0.2 148,507 + -0.5 148,507 + +0.8 148,508 - +0.6 148,511 + -0.4 148,512 - +0.5 148,738 + +1.4 148,738 + -0.5 148,749 + -1.3 148,792 + -0.0 148,793 - +0.0 148,793 - -0.3 148,794 + -1.3 148,794 + +0.1 148,795 - -0.1 148,795 - -0.3 148,795 - -0.6 148,795 - +1.3 148,798 + -0.1 148,799 - -0.8 148,799 - +0.4 148,893 - -0.0 148,909 + +0.3 149,024 - CA264_00680 0.12 -0.3 149,150 - CA264_00680 0.25 -1.4 149,150 - CA264_00680 0.25 +0.1 149,152 + CA264_00680 0.26 +0.3 149,152 + CA264_00680 0.26 +1.7 149,231 - CA264_00680 0.34 +1.1 149,257 + CA264_00680 0.37 +0.2 149,258 - CA264_00680 0.37 -0.8 149,258 - CA264_00680 0.37 -0.6 149,314 + CA264_00680 0.43 -1.1 149,314 + CA264_00680 0.43 -1.0 149,315 - CA264_00680 0.43 +0.8 149,316 + CA264_00680 0.43 -1.4 149,317 - CA264_00680 0.43 -0.2 149,419 + CA264_00680 0.54 +0.4 149,420 - CA264_00680 0.54 -0.9 149,579 - CA264_00680 0.70 +0.5 149,634 - CA264_00680 0.76 +0.1 149,636 + CA264_00680 0.76 -0.5 149,637 - CA264_00680 0.76 +0.3 149,637 - CA264_00680 0.76 -1.9 149,638 + CA264_00680 0.77 -1.3 149,824 + -0.6 149,867 - -0.3 149,883 - -0.1 149,959 - -0.9 149,996 - -1.1 150,001 + +2.0 150,002 - +0.2 150,031 - +0.4 150,053 - CA264_00685 0.12 -0.1 150,058 + CA264_00685 0.13 -0.4 150,058 + CA264_00685 0.13 -0.5 150,161 + CA264_00685 0.37 +0.5 150,162 - CA264_00685 0.37 -0.6 150,248 + CA264_00685 0.57 -0.1 150,357 + CA264_00685 0.83 -0.5 150,378 + CA264_00685 0.88 -0.4 150,379 - CA264_00685 0.88 -0.1 150,379 - CA264_00685 0.88 -0.2 150,379 - CA264_00685 0.88 +0.1 150,379 - CA264_00685 0.88 -0.9 150,393 + -0.6 150,394 - +0.6 150,394 - -1.7 150,425 - +0.3 150,429 - +0.1 150,429 - -0.4 150,465 + +0.6 150,508 - -0.3 150,571 + -2.1 150,692 - CA264_00690 0.21 -0.0 150,695 - CA264_00690 0.21 -0.6 150,760 + CA264_00690 0.27 +0.5 150,765 - CA264_00690 0.28 +0.2 150,822 - CA264_00690 0.34 -0.3
Or see this region's nucleotide sequence