Strain Fitness in Serratia liquefaciens MT49 around IAI46_23925

Experiment: Cadmium acetate 20 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 20 uM, anaerobic
5,089,975	+		IAI46_23920	0.71	+0.3
5,090,005	+		IAI46_23920	0.72	+0.3
5,090,005	+		IAI46_23920	0.72	-1.2
5,090,046	+		IAI46_23920	0.74	+0.7
5,090,060	+		IAI46_23920	0.74	-0.2
5,090,061	-		IAI46_23920	0.74	-0.5
5,090,128	+		IAI46_23920	0.77	-1.3
5,090,129	-		IAI46_23920	0.77	-0.5
5,090,129	-		IAI46_23920	0.77	-0.7
5,090,131	-		IAI46_23920	0.77	+0.5
5,090,141	-		IAI46_23920	0.77	-0.3
5,090,141	-		IAI46_23920	0.77	+0.0
5,090,210	+		IAI46_23920	0.80	+0.2
5,090,216	-		IAI46_23920	0.81	+0.3
5,090,235	+		IAI46_23920	0.81	-1.3
5,090,253	+		IAI46_23920	0.82	-0.5
5,090,410	-		IAI46_23920	0.88	+0.1
5,090,472	+				+0.7
5,090,473	-				-0.6
5,090,473	-				+0.7
5,090,475	+				+2.1
5,090,475	+				-0.7
5,090,520	-				-0.2
5,090,536	+				-0.0
5,090,619	-				-0.2
5,090,623	+				+0.7
5,090,623	+				-0.5
5,090,623	+				-0.3
5,090,624	-				-0.3
5,090,624	-				-0.0
5,090,624	-				+0.3
5,090,626	-				-0.0
5,090,673	+				-0.2
5,090,673	+				+0.6
5,090,673	+				-0.1
5,090,677	+				+0.8
5,090,677	+				-0.0
5,090,692	+				+0.8
5,090,692	+				+0.1
5,090,693	-				+0.5
5,090,748	+				+0.4
5,090,749	-				-0.6
5,090,770	+				-0.0
5,090,770	+				+0.3
5,090,771	-				+0.1
5,090,774	+				+0.2
5,090,775	-				-0.1
5,090,775	-				+0.2
5,090,775	-				+0.1
5,090,775	-				+0.3
5,090,777	+				-0.1
5,090,778	-				+0.3
5,090,778	-				+0.3
5,090,783	-				+0.3
5,090,800	+				-0.0
5,090,800	+				-0.9
5,090,801	-				+0.6
5,090,801	-				+0.8
5,090,801	-				+0.3
5,090,801	-				+0.7
5,090,801	-				-0.2
5,090,834	-				-0.6
5,090,841	+				-0.3
5,090,841	+				+0.3
5,090,841	+				+0.3
5,090,842	-				-0.3
5,090,842	-				-0.3
5,090,842	-				+0.3
5,090,842	-				+0.4
5,090,842	-				+0.2
5,090,842	-				+1.1
5,090,842	-				+0.0
5,090,842	-				+0.6
5,090,846	+				-2.4
5,090,846	+				-0.2
5,090,846	+				+0.0
5,090,846	+				-0.4
5,090,846	+				-0.3
5,090,846	+				+0.2
5,090,846	+				-0.4
5,090,846	+				-2.4
5,090,846	+				+0.1
5,090,847	-				-0.1
5,090,847	-				-0.1
5,090,847	-				+0.3
5,090,847	-				-0.1
5,090,856	+				+0.3
5,090,856	+				+1.1
5,090,857	-				+0.7
5,090,857	-				-0.6
5,090,857	-				+0.2
5,090,857	-				+0.1
5,090,857	-				-0.1
5,090,914	+				-0.6
5,090,914	+				+0.6
5,090,914	+				-2.1
5,090,914	+				+1.1
5,090,914	+				-0.9
5,090,914	+				-0.1
5,090,914	+				+0.6
5,090,914	+				+0.4
5,090,914	+				-0.3
5,090,915	-				+0.0
5,090,915	-				+0.8
5,090,915	-				-1.1
5,090,922	+				+0.7
5,090,936	-				+2.1
5,090,970	+				+1.0
5,090,971	-				-0.5
5,090,971	-				+0.1
5,090,982	-				+0.4
5,090,993	+				+0.7
5,090,994	-				-0.0
5,090,994	-				+0.7
5,090,994	-				-0.4
5,090,994	-				+1.1
5,091,245	+		IAI46_23925	0.20	+0.2
5,091,309	+		IAI46_23925	0.24	+0.4
5,091,336	-		IAI46_23925	0.26	-0.3
5,091,347	-		IAI46_23925	0.27	-0.7
5,091,509	-		IAI46_23925	0.38	-0.7
5,091,574	-		IAI46_23925	0.42	-0.5
5,091,574	-		IAI46_23925	0.42	-0.1
5,091,655	+		IAI46_23925	0.48	+0.5
5,091,656	-		IAI46_23925	0.48	-0.8
5,091,656	-		IAI46_23925	0.48	+0.8
5,091,777	+		IAI46_23925	0.57	-0.0
5,091,778	-		IAI46_23925	0.57	-0.9
5,091,778	-		IAI46_23925	0.57	+0.8
5,091,788	+		IAI46_23925	0.57	+0.1
5,091,789	-		IAI46_23925	0.57	-1.2
5,091,789	-		IAI46_23925	0.57	-0.8
5,091,789	-		IAI46_23925	0.57	+0.9
5,091,791	+		IAI46_23925	0.58	+0.5
5,091,791	+		IAI46_23925	0.58	+1.6
5,091,791	+		IAI46_23925	0.58	-0.7
5,091,791	+		IAI46_23925	0.58	+0.5
5,091,792	-		IAI46_23925	0.58	-0.2
5,091,839	+		IAI46_23925	0.61	+0.5
5,091,840	-		IAI46_23925	0.61	+0.2
5,091,840	-		IAI46_23925	0.61	-0.0
5,091,848	+		IAI46_23925	0.62	+1.1
5,091,848	+		IAI46_23925	0.62	+0.0
5,091,849	-		IAI46_23925	0.62	+0.5
5,091,849	-		IAI46_23925	0.62	+0.2
5,091,849	-		IAI46_23925	0.62	+0.6
5,091,915	+		IAI46_23925	0.66	-0.5
5,091,916	-		IAI46_23925	0.66	+0.0
5,091,962	+		IAI46_23925	0.70	-0.7
5,091,962	+		IAI46_23925	0.70	+1.4
5,092,004	-		IAI46_23925	0.72	+0.7
5,092,092	-		IAI46_23925	0.79	+0.7
5,092,116	-		IAI46_23925	0.80	+0.5
5,092,136	+		IAI46_23925	0.82	-0.3
5,092,161	-		IAI46_23925	0.83	+0.5
5,092,178	+		IAI46_23925	0.85	-0.7
5,092,178	+		IAI46_23925	0.85	+0.3
5,092,178	+		IAI46_23925	0.85	+1.2
5,092,179	-		IAI46_23925	0.85	+0.1
5,092,179	-		IAI46_23925	0.85	+0.3
5,092,179	-		IAI46_23925	0.85	+0.8
5,092,179	-		IAI46_23925	0.85	-1.0
5,092,182	+		IAI46_23925	0.85	+0.5
5,092,187	+		IAI46_23925	0.85	-0.7
5,092,188	-		IAI46_23925	0.85	-0.2
5,092,188	-		IAI46_23925	0.85	-0.4
5,092,223	+		IAI46_23925	0.88	-0.2
5,092,279	+				+0.1
5,092,279	+				+1.1
5,092,279	+				-0.1
5,092,280	-				-0.5
5,092,322	-				-2.0
5,092,381	+				-0.2
5,092,381	+				-1.4
5,092,381	+				-0.4
5,092,382	-				-0.4
5,092,382	-				+0.3
5,092,382	-				-0.3
5,092,382	-				-0.1
5,092,382	-				+1.2
5,092,382	-				+0.1
5,092,387	+				+0.5
5,092,387	+				+0.1
5,092,387	+				-0.7
5,092,388	-				-2.3
5,092,388	-				-0.2
5,092,399	+				-0.6
5,092,424	+				-1.2
5,092,425	-				-0.7
5,092,487	-				+0.3
5,092,489	-				+0.6
5,092,498	-				+0.5
5,092,528	-				-1.5
5,092,528	-				+0.5
5,092,630	-				-0.8
5,092,630	-				-0.0
5,092,661	-				-0.1
5,092,687	+				+0.3
5,092,687	+				-0.2
5,092,687	+				+0.6
5,092,687	+				-0.3
5,092,687	+				-0.4
5,092,687	+				-1.1
5,092,687	+				+0.8
5,092,687	+				-1.2
5,092,687	+				-0.8
5,092,687	+				-0.1
5,092,687	+				-1.8
5,092,687	+				+0.4
5,092,687	+				-0.1
5,092,687	+				-0.2
5,092,687	+				-1.0
5,092,687	+				-0.7
5,092,687	+				-0.8
5,092,689	+				-0.2
5,092,689	+				-0.4
5,092,689	+				+0.5
5,092,689	+				+0.1
5,092,689	+				-0.2
5,092,691	+				-0.4
5,092,691	+				-0.8
5,092,691	+				-1.3
5,092,721	+				+0.6
5,092,726	+				-0.2
5,092,726	+				+0.1
5,092,726	+				-0.2
5,092,726	+				-0.5
5,092,727	-				+0.5
5,092,727	-				-0.1
5,092,727	-				-0.2
5,092,727	-				-1.4
5,092,727	-				+1.5
5,092,786	-				+0.6
5,092,841	-				+0.4
5,092,841	-				-0.3
5,092,841	-				-1.1
5,092,911	-		IAI46_23930	0.14	+0.8
5,092,915	+		IAI46_23930	0.14	+1.5
5,092,915	+		IAI46_23930	0.14	+0.2
5,092,916	-		IAI46_23930	0.15	+0.6
5,092,958	+		IAI46_23930	0.18	-0.1
5,092,959	-		IAI46_23930	0.18	+0.7
5,092,959	-		IAI46_23930	0.18	+0.1
5,092,959	-		IAI46_23930	0.18	+0.2
5,093,027	-		IAI46_23930	0.23	-0.0
5,093,080	+		IAI46_23930	0.27	-1.2
5,093,080	+		IAI46_23930	0.27	-0.3
5,093,080	+		IAI46_23930	0.27	+0.1
5,093,080	+		IAI46_23930	0.27	+0.5
5,093,081	-		IAI46_23930	0.27	-0.3
5,093,081	-		IAI46_23930	0.27	+0.4
5,093,109	+		IAI46_23930	0.30	-0.0
5,093,109	+		IAI46_23930	0.30	+0.2
5,093,109	+		IAI46_23930	0.30	+0.4
5,093,109	+		IAI46_23930	0.30	-0.2
5,093,109	+		IAI46_23930	0.30	+0.7
5,093,109	+		IAI46_23930	0.30	-0.1
5,093,109	+		IAI46_23930	0.30	-0.1
5,093,109	+		IAI46_23930	0.30	-0.7
5,093,109	+		IAI46_23930	0.30	-1.2
5,093,109	+		IAI46_23930	0.30	+0.2
5,093,109	+		IAI46_23930	0.30	-0.3
5,093,109	+		IAI46_23930	0.30	+0.8
5,093,109	+		IAI46_23930	0.30	+0.8
5,093,109	+		IAI46_23930	0.30	-0.4
5,093,109	+		IAI46_23930	0.30	+0.9
5,093,109	+		IAI46_23930	0.30	+0.8
5,093,109	+		IAI46_23930	0.30	+0.3
5,093,109	+		IAI46_23930	0.30	+0.2
5,093,109	+		IAI46_23930	0.30	-0.5
5,093,109	+		IAI46_23930	0.30	-0.0
5,093,109	+		IAI46_23930	0.30	+0.4
5,093,109	+		IAI46_23930	0.30	-0.0
5,093,110	-		IAI46_23930	0.30	+1.0
5,093,110	-		IAI46_23930	0.30	+1.7
5,093,110	-		IAI46_23930	0.30	+0.9
5,093,110	-		IAI46_23930	0.30	-0.1
5,093,110	-		IAI46_23930	0.30	+0.8
5,093,110	-		IAI46_23930	0.30	-0.5
5,093,110	-		IAI46_23930	0.30	+0.8
5,093,110	-		IAI46_23930	0.30	+0.6
5,093,110	-		IAI46_23930	0.30	-0.7
5,093,110	-		IAI46_23930	0.30	-0.2
5,093,110	-		IAI46_23930	0.30	+0.5
5,093,110	-		IAI46_23930	0.30	+0.1
5,093,110	-		IAI46_23930	0.30	+0.7
5,093,110	-		IAI46_23930	0.30	+0.2
5,093,110	-		IAI46_23930	0.30	+1.3
5,093,114	-		IAI46_23930	0.30	+1.3
5,093,114	-		IAI46_23930	0.30	+0.5
5,093,114	-		IAI46_23930	0.30	+0.1
5,093,190	+		IAI46_23930	0.36	-0.5
5,093,191	-		IAI46_23930	0.36	+0.5
5,093,343	+		IAI46_23930	0.48	-0.3
5,093,343	+		IAI46_23930	0.48	-0.0
5,093,344	-		IAI46_23930	0.48	+0.1
5,093,344	-		IAI46_23930	0.48	+0.4
5,093,344	-		IAI46_23930	0.48	+0.1
5,093,344	-		IAI46_23930	0.48	-0.3
5,093,344	-		IAI46_23930	0.48	-0.6
5,093,353	+		IAI46_23930	0.49	+1.2
5,093,361	+		IAI46_23930	0.49	+0.5
5,093,362	-		IAI46_23930	0.49	+0.3
5,093,362	-		IAI46_23930	0.49	-0.2
5,093,362	-		IAI46_23930	0.49	+0.2
5,093,386	+		IAI46_23930	0.51	+0.2
5,093,386	+		IAI46_23930	0.51	-0.3