Strain Fitness in Serratia liquefaciens MT49 around IAI46_18925

Experiment: Cadmium acetate 20 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 20 uM, anaerobic
3,984,471	+		IAI46_18920	0.59	-0.1
3,984,540	+		IAI46_18920	0.63	+0.3
3,984,540	+		IAI46_18920	0.63	+0.9
3,984,541	-		IAI46_18920	0.63	+1.6
3,984,589	+		IAI46_18920	0.66	-0.8
3,984,589	+		IAI46_18920	0.66	+0.5
3,984,589	+		IAI46_18920	0.66	-0.4
3,984,590	-		IAI46_18920	0.66	+0.9
3,984,590	-		IAI46_18920	0.66	+0.0
3,984,595	-		IAI46_18920	0.67	+0.0
3,984,595	-		IAI46_18920	0.67	-0.7
3,984,595	-		IAI46_18920	0.67	+0.0
3,984,724	-		IAI46_18920	0.75	-1.4
3,984,791	-		IAI46_18920	0.79	-1.3
3,984,809	+		IAI46_18920	0.80	-2.6
3,984,810	-		IAI46_18920	0.80	+0.0
3,985,039	-				-0.9
3,985,159	+				-0.6
3,985,196	+				+0.4
3,985,206	+				-0.4
3,985,206	+				+0.0
3,985,206	+				-2.0
3,985,207	-				+0.9
3,985,207	-				-0.1
3,985,207	-				+0.4
3,985,207	-				+0.6
3,985,207	-				+0.9
3,985,208	+				+0.4
3,985,209	-				-0.6
3,985,209	-				+0.9
3,985,213	+				-0.5
3,985,214	-				+0.3
3,985,214	-				-0.7
3,985,255	+				-0.6
3,985,256	-				+0.6
3,985,256	-				+0.6
3,985,260	-				+0.2
3,985,299	+				+2.0
3,985,299	+				-0.4
3,985,299	+				-1.1
3,985,351	+				-0.2
3,985,351	+				+0.3
3,985,377	+		IAI46_18925	0.10	-0.4
3,985,378	-		IAI46_18925	0.10	+1.8
3,985,539	-		IAI46_18925	0.18	-0.8
3,985,573	+		IAI46_18925	0.19	-0.4
3,985,573	+		IAI46_18925	0.19	+0.0
3,985,574	-		IAI46_18925	0.19	-0.2
3,985,651	-		IAI46_18925	0.23	+0.3
3,985,677	+		IAI46_18925	0.24	-0.3
3,985,779	+		IAI46_18925	0.28	-0.8
3,985,779	+		IAI46_18925	0.28	-2.0
3,985,796	+		IAI46_18925	0.29	-0.8
3,985,842	+		IAI46_18925	0.31	+2.8
3,985,870	+		IAI46_18925	0.32	-1.1
3,985,870	+		IAI46_18925	0.32	-0.3
3,985,879	+		IAI46_18925	0.33	-0.3
3,985,880	-		IAI46_18925	0.33	-1.2
3,985,880	-		IAI46_18925	0.33	+1.8
3,985,880	-		IAI46_18925	0.33	+0.9
3,985,880	-		IAI46_18925	0.33	+0.3
3,985,880	-		IAI46_18925	0.33	-1.3
3,986,000	+		IAI46_18925	0.38	-0.2
3,986,001	-		IAI46_18925	0.38	+0.4
3,986,128	-		IAI46_18925	0.44	-0.2
3,986,128	-		IAI46_18925	0.44	-0.1
3,986,128	-		IAI46_18925	0.44	-0.7
3,986,159	+		IAI46_18925	0.45	-0.1
3,986,160	-		IAI46_18925	0.45	+0.3
3,986,174	+		IAI46_18925	0.46	-0.4
3,986,174	+		IAI46_18925	0.46	+0.4
3,986,174	+		IAI46_18925	0.46	+0.5
3,986,175	-		IAI46_18925	0.46	-0.6
3,986,175	-		IAI46_18925	0.46	+0.3
3,986,197	+		IAI46_18925	0.47	-0.4
3,986,197	+		IAI46_18925	0.47	+0.2
3,986,198	-		IAI46_18925	0.47	+0.2
3,986,198	-		IAI46_18925	0.47	+0.2
3,986,239	-		IAI46_18925	0.49	-0.6
3,986,255	+		IAI46_18925	0.49	-0.4
3,986,255	+		IAI46_18925	0.49	+1.3
3,986,255	+		IAI46_18925	0.49	-0.4
3,986,256	-		IAI46_18925	0.49	+0.1
3,986,256	-		IAI46_18925	0.49	+0.3
3,986,256	-		IAI46_18925	0.49	+0.4
3,986,259	+		IAI46_18925	0.49	-0.7
3,986,259	+		IAI46_18925	0.49	-0.9
3,986,260	-		IAI46_18925	0.50	+0.2
3,986,487	+		IAI46_18925	0.60	+0.6
3,986,559	+		IAI46_18925	0.63	+0.9
3,986,559	+		IAI46_18925	0.63	+1.1
3,986,598	-		IAI46_18925	0.65	+0.6
3,986,617	+		IAI46_18925	0.65	+0.9
3,986,617	+		IAI46_18925	0.65	+0.1
3,986,617	+		IAI46_18925	0.65	+1.5
3,986,618	-		IAI46_18925	0.65	-2.0
3,986,661	+		IAI46_18925	0.67	+0.4
3,986,661	+		IAI46_18925	0.67	-0.1
3,986,662	-		IAI46_18925	0.67	+0.9
3,986,662	-		IAI46_18925	0.67	+0.6
3,986,683	+		IAI46_18925	0.68	-3.5
3,986,790	+		IAI46_18925	0.73	-0.4
3,986,813	+		IAI46_18925	0.74	+1.0
3,986,814	-		IAI46_18925	0.74	-2.2
3,986,814	-		IAI46_18925	0.74	+1.4
3,986,814	-		IAI46_18925	0.74	+0.2
3,986,879	+		IAI46_18925	0.77	-0.6
3,986,879	+		IAI46_18925	0.77	-0.3
3,986,879	+		IAI46_18925	0.77	+0.7
3,987,089	+		IAI46_18925	0.86	+0.9
3,987,089	+		IAI46_18925	0.86	-1.3
3,987,090	-		IAI46_18925	0.86	-1.2
3,987,186	-				-0.3
3,987,220	+				-0.1
3,987,221	-				-0.6
3,987,225	-				-1.0
3,987,225	-				+0.1
3,987,293	-				+1.5
3,987,389	-				-0.4
3,987,432	+				-0.0
3,987,439	-				-0.6
3,987,464	+				-0.0
3,987,465	-				-0.0
3,987,469	+				+0.5
3,987,470	-				+0.6
3,987,585	+				+0.6
3,987,585	+				-0.6
3,987,606	-				-1.0
3,987,623	-				-0.8
3,987,623	-				+0.7
3,987,660	+				+0.9
3,987,661	-				+0.7
3,987,663	-				-0.7
3,987,664	+				+0.4
3,987,665	-				-0.1
3,987,665	-				+0.2
3,987,776	+				+0.3
3,987,794	+				-0.4
3,987,794	+				+0.3
3,987,795	-				+0.0
3,987,795	-				-0.3
3,987,795	-				+0.8
3,987,795	-				-1.0
3,987,795	-				-0.6
3,987,795	-				-0.1
3,987,830	+				+0.9
3,987,853	+				-0.5
3,987,853	+				-0.4
3,987,854	-				+0.9
3,987,909	-				-0.4
3,987,936	+				+0.6
3,987,936	+				-0.3
3,987,936	+				+0.1
3,987,936	+				-0.1
3,987,936	+				+0.3
3,987,936	+				-0.3
3,987,937	-				-2.6
3,987,937	-				+0.4
3,987,938	+				-0.1
3,987,938	+				+1.1
3,987,938	+				-2.2
3,987,938	+				+0.5
3,987,938	+				+0.2
3,987,939	-				+0.3
3,987,939	-				+0.8
3,987,939	-				-0.5
3,987,939	-				+0.1
3,987,939	-				+0.3
3,987,944	+				+0.6
3,987,973	+		IAI46_18930	0.19	-1.0
3,987,993	-		IAI46_18930	0.30	-0.8
3,988,018	-		IAI46_18930	0.44	+1.1
3,988,155	+				+0.3
3,988,155	+				+0.2
3,988,156	-				+0.5
3,988,159	+				+0.1
3,988,159	+				+1.0
3,988,160	-				+0.6
3,988,160	-				+1.0
3,988,181	+				-0.2
3,988,203	+				+0.6
3,988,204	-				+0.2
3,988,204	-				-0.2
3,988,207	+				+1.3
3,988,207	+				-0.0
3,988,207	+				-0.2
3,988,208	-				+0.4
3,988,208	-				+0.2
3,988,208	-				-0.3
3,988,208	-				+0.9
3,988,256	+				-1.8
3,988,256	+				-0.3
3,988,257	-				+0.7
3,988,257	-				-0.4
3,988,257	-				+0.5
3,988,257	-				+0.8
3,988,264	-				-0.2
3,988,264	-				-0.1
3,988,268	-				+0.3
3,988,268	-				+0.7
3,988,284	+				+0.1
3,988,284	+				-0.8
3,988,331	+				-1.5
3,988,331	+				+0.7
3,988,331	+				-0.6
3,988,332	-				+0.7