Experiment: Cadmium acetate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11845 and IAI46_11850 are separated by 19 nucleotides IAI46_11850 and IAI46_11855 are separated by 111 nucleotides
IAI46_11845: IAI46_11845 - molybdopterin-dependent oxidoreductase, at 2,502,224 to 2,505,722
_11845
IAI46_11850: IAI46_11850 - LysR family transcriptional regulator, at 2,505,742 to 2,506,623
_11850
IAI46_11855: IAI46_11855 - sulfite exporter TauE/SafE family protein, at 2,506,735 to 2,507,481
_11855
Position (kb)
2505
2506
2507 Strain fitness (log2 ratio)
-2
-1
0
1 at 2504.800 kb on - strand, within IAI46_11845 at 2504.813 kb on + strand, within IAI46_11845 at 2504.813 kb on + strand, within IAI46_11845 at 2504.813 kb on + strand, within IAI46_11845 at 2504.844 kb on + strand, within IAI46_11845 at 2504.850 kb on + strand, within IAI46_11845 at 2504.850 kb on + strand, within IAI46_11845 at 2504.851 kb on - strand, within IAI46_11845 at 2504.852 kb on + strand, within IAI46_11845 at 2504.852 kb on + strand, within IAI46_11845 at 2504.853 kb on - strand, within IAI46_11845 at 2504.915 kb on + strand, within IAI46_11845 at 2505.182 kb on - strand, within IAI46_11845 at 2505.494 kb on + strand at 2505.494 kb on + strand at 2505.496 kb on + strand at 2505.496 kb on + strand at 2505.496 kb on + strand at 2505.497 kb on - strand at 2505.631 kb on - strand at 2505.631 kb on - strand at 2505.634 kb on + strand at 2505.646 kb on - strand at 2505.721 kb on - strand at 2505.808 kb on + strand at 2505.808 kb on + strand at 2505.809 kb on - strand at 2505.809 kb on - strand at 2505.967 kb on + strand, within IAI46_11850 at 2506.045 kb on - strand, within IAI46_11850 at 2506.052 kb on + strand, within IAI46_11850 at 2506.053 kb on - strand, within IAI46_11850 at 2506.053 kb on - strand, within IAI46_11850 at 2506.053 kb on - strand, within IAI46_11850 at 2506.145 kb on + strand, within IAI46_11850 at 2506.280 kb on + strand, within IAI46_11850 at 2506.281 kb on - strand, within IAI46_11850 at 2506.402 kb on + strand, within IAI46_11850 at 2506.403 kb on - strand, within IAI46_11850 at 2506.634 kb on + strand at 2506.634 kb on + strand at 2506.634 kb on + strand at 2506.728 kb on + strand at 2506.728 kb on + strand at 2506.734 kb on + strand at 2506.735 kb on - strand at 2506.735 kb on - strand at 2506.735 kb on - strand at 2506.735 kb on - strand at 2506.779 kb on + strand at 2507.068 kb on + strand, within IAI46_11855 at 2507.147 kb on + strand, within IAI46_11855 at 2507.203 kb on + strand, within IAI46_11855
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 20 uM, anaerobic remove 2,504,800 - IAI46_11845 0.74 +0.6 2,504,813 + IAI46_11845 0.74 +0.1 2,504,813 + IAI46_11845 0.74 +0.5 2,504,813 + IAI46_11845 0.74 +0.9 2,504,844 + IAI46_11845 0.75 -1.0 2,504,850 + IAI46_11845 0.75 +0.2 2,504,850 + IAI46_11845 0.75 +1.1 2,504,851 - IAI46_11845 0.75 -0.2 2,504,852 + IAI46_11845 0.75 +0.4 2,504,852 + IAI46_11845 0.75 -0.4 2,504,853 - IAI46_11845 0.75 +0.7 2,504,915 + IAI46_11845 0.77 -0.4 2,505,182 - IAI46_11845 0.85 -0.0 2,505,494 + +0.6 2,505,494 + +0.3 2,505,496 + -0.0 2,505,496 + +0.3 2,505,496 + -0.7 2,505,497 - +0.5 2,505,631 - -0.4 2,505,631 - +0.6 2,505,634 + -0.0 2,505,646 - -0.2 2,505,721 - -1.9 2,505,808 + +0.1 2,505,808 + -1.4 2,505,809 - -0.7 2,505,809 - -0.3 2,505,967 + IAI46_11850 0.26 +0.2 2,506,045 - IAI46_11850 0.34 +0.1 2,506,052 + IAI46_11850 0.35 -1.2 2,506,053 - IAI46_11850 0.35 +1.2 2,506,053 - IAI46_11850 0.35 -0.5 2,506,053 - IAI46_11850 0.35 +0.7 2,506,145 + IAI46_11850 0.46 -0.7 2,506,280 + IAI46_11850 0.61 +0.3 2,506,281 - IAI46_11850 0.61 -1.4 2,506,402 + IAI46_11850 0.75 -0.7 2,506,403 - IAI46_11850 0.75 -0.2 2,506,634 + +1.2 2,506,634 + -0.6 2,506,634 + +0.1 2,506,728 + +0.5 2,506,728 + +1.2 2,506,734 + +0.3 2,506,735 - -1.6 2,506,735 - -1.2 2,506,735 - +0.8 2,506,735 - +0.3 2,506,779 + +1.3 2,507,068 + IAI46_11855 0.45 +0.7 2,507,147 + IAI46_11855 0.55 +0.8 2,507,203 + IAI46_11855 0.63 -0.5
Or see this region's nucleotide sequence