Experiment: Cadmium acetate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11255 and IAI46_11260 are separated by 415 nucleotides IAI46_11260 and IAI46_11265 are separated by 70 nucleotides IAI46_11265 and IAI46_11270 are separated by 79 nucleotides
IAI46_11255: IAI46_11255 - C40 family peptidase, at 2,376,129 to 2,376,947
_11255
IAI46_11260: IAI46_11260 - Grx4 family monothiol glutaredoxin, at 2,377,363 to 2,377,710
_11260
IAI46_11265: IAI46_11265 - ribonuclease T, at 2,377,781 to 2,378,461
_11265
IAI46_11270: IAI46_11270 - lactoylglutathione lyase, at 2,378,541 to 2,378,948
_11270
Position (kb)
2377
2378 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2376.414 kb on - strand, within IAI46_11255 at 2376.415 kb on + strand, within IAI46_11255 at 2376.415 kb on + strand, within IAI46_11255 at 2376.415 kb on + strand, within IAI46_11255 at 2376.422 kb on - strand, within IAI46_11255 at 2376.425 kb on - strand, within IAI46_11255 at 2376.425 kb on - strand, within IAI46_11255 at 2376.464 kb on + strand, within IAI46_11255 at 2376.479 kb on - strand, within IAI46_11255 at 2376.903 kb on + strand at 2376.933 kb on - strand at 2376.956 kb on + strand at 2377.018 kb on - strand at 2377.018 kb on - strand at 2377.165 kb on + strand at 2377.165 kb on + strand at 2377.330 kb on + strand at 2377.359 kb on + strand at 2377.359 kb on + strand at 2377.410 kb on + strand, within IAI46_11260 at 2377.515 kb on + strand, within IAI46_11260 at 2377.633 kb on + strand, within IAI46_11260 at 2377.709 kb on - strand at 2377.723 kb on + strand at 2377.756 kb on + strand at 2377.757 kb on - strand at 2377.876 kb on - strand, within IAI46_11265 at 2378.009 kb on - strand, within IAI46_11265 at 2378.190 kb on - strand, within IAI46_11265 at 2378.303 kb on - strand, within IAI46_11265 at 2378.363 kb on + strand, within IAI46_11265 at 2378.364 kb on - strand, within IAI46_11265 at 2378.364 kb on - strand, within IAI46_11265 at 2378.660 kb on + strand, within IAI46_11270 at 2378.660 kb on + strand, within IAI46_11270
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 20 uM, anaerobic remove 2,376,414 - IAI46_11255 0.35 +0.4 2,376,415 + IAI46_11255 0.35 -0.9 2,376,415 + IAI46_11255 0.35 -1.2 2,376,415 + IAI46_11255 0.35 -0.2 2,376,422 - IAI46_11255 0.36 +0.1 2,376,425 - IAI46_11255 0.36 +0.9 2,376,425 - IAI46_11255 0.36 +1.9 2,376,464 + IAI46_11255 0.41 -0.2 2,376,479 - IAI46_11255 0.43 -0.4 2,376,903 + -0.7 2,376,933 - -2.1 2,376,956 + +0.5 2,377,018 - +0.0 2,377,018 - -1.1 2,377,165 + +0.8 2,377,165 + -0.2 2,377,330 + -1.3 2,377,359 + -1.0 2,377,359 + +0.4 2,377,410 + IAI46_11260 0.14 -0.5 2,377,515 + IAI46_11260 0.44 -2.4 2,377,633 + IAI46_11260 0.78 +1.1 2,377,709 - +0.9 2,377,723 + +0.3 2,377,756 + -2.3 2,377,757 - -0.1 2,377,876 - IAI46_11265 0.14 -1.0 2,378,009 - IAI46_11265 0.33 -0.8 2,378,190 - IAI46_11265 0.60 +1.2 2,378,303 - IAI46_11265 0.77 +0.6 2,378,363 + IAI46_11265 0.85 +0.3 2,378,364 - IAI46_11265 0.86 +1.6 2,378,364 - IAI46_11265 0.86 +0.6 2,378,660 + IAI46_11270 0.29 -0.8 2,378,660 + IAI46_11270 0.29 +1.8
Or see this region's nucleotide sequence