Experiment: Cadmium acetate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09685 and IAI46_09690 are separated by 38 nucleotides IAI46_09690 and IAI46_09695 are separated by 23 nucleotides IAI46_09695 and IAI46_09700 are separated by 426 nucleotides
IAI46_09685: IAI46_09685 - rhodanese-related sulfurtransferase, at 2,054,493 to 2,055,563
_09685
IAI46_09690: IAI46_09690 - YceI family protein, at 2,055,602 to 2,056,180
_09690
IAI46_09695: IAI46_09695 - cytochrome b, at 2,056,204 to 2,056,758
_09695
IAI46_09700: IAI46_09700 - AI-2E family transporter, at 2,057,185 to 2,058,237
_09700
Position (kb)
2056
2057 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2055.525 kb on - strand at 2055.546 kb on - strand at 2055.764 kb on - strand, within IAI46_09690 at 2056.033 kb on - strand, within IAI46_09690 at 2056.044 kb on + strand, within IAI46_09690 at 2056.044 kb on + strand, within IAI46_09690 at 2056.180 kb on + strand at 2056.320 kb on - strand, within IAI46_09695 at 2056.397 kb on - strand, within IAI46_09695 at 2056.434 kb on - strand, within IAI46_09695 at 2056.450 kb on - strand, within IAI46_09695 at 2056.466 kb on + strand, within IAI46_09695 at 2056.515 kb on - strand, within IAI46_09695 at 2056.597 kb on - strand, within IAI46_09695 at 2056.637 kb on + strand, within IAI46_09695 at 2056.638 kb on - strand, within IAI46_09695 at 2056.638 kb on - strand, within IAI46_09695 at 2056.683 kb on - strand, within IAI46_09695 at 2056.722 kb on + strand at 2056.723 kb on - strand at 2056.770 kb on - strand at 2056.794 kb on + strand at 2056.799 kb on - strand at 2056.836 kb on + strand at 2056.836 kb on + strand at 2056.837 kb on - strand at 2056.854 kb on + strand at 2056.879 kb on + strand at 2056.930 kb on - strand at 2057.090 kb on + strand at 2057.091 kb on - strand at 2057.098 kb on + strand at 2057.099 kb on - strand at 2057.132 kb on + strand at 2057.133 kb on - strand at 2057.251 kb on - strand at 2057.316 kb on + strand, within IAI46_09700 at 2057.317 kb on - strand, within IAI46_09700 at 2057.345 kb on + strand, within IAI46_09700 at 2057.346 kb on - strand, within IAI46_09700 at 2057.358 kb on + strand, within IAI46_09700 at 2057.361 kb on - strand, within IAI46_09700 at 2057.384 kb on + strand, within IAI46_09700 at 2057.429 kb on + strand, within IAI46_09700 at 2057.540 kb on + strand, within IAI46_09700 at 2057.563 kb on + strand, within IAI46_09700 at 2057.563 kb on + strand, within IAI46_09700 at 2057.564 kb on - strand, within IAI46_09700 at 2057.660 kb on + strand, within IAI46_09700 at 2057.664 kb on + strand, within IAI46_09700 at 2057.664 kb on + strand, within IAI46_09700 at 2057.664 kb on + strand, within IAI46_09700 at 2057.715 kb on + strand, within IAI46_09700 at 2057.739 kb on + strand, within IAI46_09700
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 20 uM, anaerobic remove 2,055,525 - +1.1 2,055,546 - +1.7 2,055,764 - IAI46_09690 0.28 -0.2 2,056,033 - IAI46_09690 0.74 +0.8 2,056,044 + IAI46_09690 0.76 +0.2 2,056,044 + IAI46_09690 0.76 +0.1 2,056,180 + +0.2 2,056,320 - IAI46_09695 0.21 -0.4 2,056,397 - IAI46_09695 0.35 -0.3 2,056,434 - IAI46_09695 0.41 -1.8 2,056,450 - IAI46_09695 0.44 +0.2 2,056,466 + IAI46_09695 0.47 +0.4 2,056,515 - IAI46_09695 0.56 +0.3 2,056,597 - IAI46_09695 0.71 -0.1 2,056,637 + IAI46_09695 0.78 +0.3 2,056,638 - IAI46_09695 0.78 +0.5 2,056,638 - IAI46_09695 0.78 +1.1 2,056,683 - IAI46_09695 0.86 +1.7 2,056,722 + -0.9 2,056,723 - -0.1 2,056,770 - -0.6 2,056,794 + +1.4 2,056,799 - +0.3 2,056,836 + -0.4 2,056,836 + +0.4 2,056,837 - +0.2 2,056,854 + -0.4 2,056,879 + -1.1 2,056,930 - -0.4 2,057,090 + +2.1 2,057,091 - -1.2 2,057,098 + +0.9 2,057,099 - -2.1 2,057,132 + -0.9 2,057,133 - +0.4 2,057,251 - -1.3 2,057,316 + IAI46_09700 0.12 -1.0 2,057,317 - IAI46_09700 0.13 +0.4 2,057,345 + IAI46_09700 0.15 +0.7 2,057,346 - IAI46_09700 0.15 +1.6 2,057,358 + IAI46_09700 0.16 +1.0 2,057,361 - IAI46_09700 0.17 -0.4 2,057,384 + IAI46_09700 0.19 -1.1 2,057,429 + IAI46_09700 0.23 -0.3 2,057,540 + IAI46_09700 0.34 -1.1 2,057,563 + IAI46_09700 0.36 -0.9 2,057,563 + IAI46_09700 0.36 -2.7 2,057,564 - IAI46_09700 0.36 -0.7 2,057,660 + IAI46_09700 0.45 -2.4 2,057,664 + IAI46_09700 0.45 -0.5 2,057,664 + IAI46_09700 0.45 +0.3 2,057,664 + IAI46_09700 0.45 -0.2 2,057,715 + IAI46_09700 0.50 -0.9 2,057,739 + IAI46_09700 0.53 +0.3
Or see this region's nucleotide sequence