Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4497 and EX28DRAFT_4498 are separated by 66 nucleotides EX28DRAFT_4498 and EX28DRAFT_4499 are separated by 13 nucleotides EX28DRAFT_4499 and EX28DRAFT_4500 overlap by 4 nucleotides
EX28DRAFT_4497: EX28DRAFT_4497 - Uncharacterized protein conserved in bacteria, at 64,084 to 65,541
_4497
EX28DRAFT_4498: EX28DRAFT_4498 - ubiquinone/menaquinone biosynthesis methyltransferases, at 65,608 to 66,363
_4498
EX28DRAFT_4499: EX28DRAFT_4499 - Uncharacterized protein conserved in bacteria, at 66,377 to 66,982
_4499
EX28DRAFT_4500: EX28DRAFT_4500 - 2-octaprenylphenol hydroxylase (EC 1.14.13.-), at 66,979 to 68,619
_4500
Position (kb) 65
66
67 Strain fitness (log2 ratio) -1
0
1 at 64.756 kb on + strand, within EX28DRAFT_4497 at 64.757 kb on - strand, within EX28DRAFT_4497 at 64.873 kb on + strand, within EX28DRAFT_4497 at 64.874 kb on - strand, within EX28DRAFT_4497 at 64.874 kb on - strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.903 kb on + strand, within EX28DRAFT_4497 at 64.904 kb on - strand, within EX28DRAFT_4497 at 64.953 kb on + strand, within EX28DRAFT_4497 at 64.953 kb on + strand, within EX28DRAFT_4497 at 65.011 kb on + strand, within EX28DRAFT_4497 at 65.012 kb on - strand, within EX28DRAFT_4497 at 65.077 kb on - strand, within EX28DRAFT_4497 at 65.097 kb on + strand, within EX28DRAFT_4497 at 65.098 kb on - strand, within EX28DRAFT_4497 at 65.143 kb on - strand, within EX28DRAFT_4497 at 65.286 kb on + strand, within EX28DRAFT_4497 at 65.388 kb on + strand, within EX28DRAFT_4497 at 65.464 kb on - strand at 65.569 kb on + strand at 66.486 kb on + strand, within EX28DRAFT_4499 at 66.528 kb on + strand, within EX28DRAFT_4499
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 64,756 + EX28DRAFT_4497 0.46 -0.3 64,757 - EX28DRAFT_4497 0.46 +0.2 64,873 + EX28DRAFT_4497 0.54 +0.8 64,874 - EX28DRAFT_4497 0.54 +0.7 64,874 - EX28DRAFT_4497 0.54 -0.0 64,882 + EX28DRAFT_4497 0.55 -0.1 64,882 + EX28DRAFT_4497 0.55 +0.1 64,882 + EX28DRAFT_4497 0.55 +0.7 64,903 + EX28DRAFT_4497 0.56 +0.6 64,904 - EX28DRAFT_4497 0.56 -0.2 64,953 + EX28DRAFT_4497 0.60 +0.0 64,953 + EX28DRAFT_4497 0.60 -1.0 65,011 + EX28DRAFT_4497 0.64 +0.0 65,012 - EX28DRAFT_4497 0.64 +0.9 65,077 - EX28DRAFT_4497 0.68 +1.2 65,097 + EX28DRAFT_4497 0.69 +0.6 65,098 - EX28DRAFT_4497 0.70 -1.5 65,143 - EX28DRAFT_4497 0.73 -0.4 65,286 + EX28DRAFT_4497 0.82 -0.0 65,388 + EX28DRAFT_4497 0.89 -0.3 65,464 - +0.6 65,569 + -0.3 66,486 + EX28DRAFT_4499 0.18 -0.2 66,528 + EX28DRAFT_4499 0.25 -0.1
Or see this region's nucleotide sequence