Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2374

Experiment: M9 with sucrose and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2373 and EX28DRAFT_2374 are separated by 9 nucleotidesEX28DRAFT_2374 and EX28DRAFT_2375 are separated by 188 nucleotides EX28DRAFT_2373: EX28DRAFT_2373 - 2,3-dihydroxybenzoate-AMP ligase, at 2,392,563 to 2,394,173 _2373 EX28DRAFT_2374: EX28DRAFT_2374 - isochorismate synthase (EC 5.4.4.2), at 2,394,183 to 2,395,358 _2374 EX28DRAFT_2375: EX28DRAFT_2375 - ABC-type Fe2+-enterobactin transport system, periplasmic component, at 2,395,547 to 2,396,506 _2375 Position (kb) 2394 2395 2396Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2393.277 kb on - strand, within EX28DRAFT_2373at 2393.468 kb on - strand, within EX28DRAFT_2373at 2393.468 kb on - strand, within EX28DRAFT_2373at 2393.468 kb on - strand, within EX28DRAFT_2373at 2393.472 kb on - strand, within EX28DRAFT_2373at 2393.472 kb on - strand, within EX28DRAFT_2373at 2393.497 kb on + strand, within EX28DRAFT_2373at 2393.548 kb on + strand, within EX28DRAFT_2373at 2393.549 kb on - strand, within EX28DRAFT_2373at 2393.915 kb on - strand, within EX28DRAFT_2373at 2393.915 kb on - strand, within EX28DRAFT_2373at 2394.158 kb on + strandat 2394.668 kb on + strand, within EX28DRAFT_2374at 2394.690 kb on + strand, within EX28DRAFT_2374at 2394.690 kb on + strand, within EX28DRAFT_2374at 2394.690 kb on + strand, within EX28DRAFT_2374at 2394.691 kb on - strand, within EX28DRAFT_2374at 2395.037 kb on - strand, within EX28DRAFT_2374at 2395.269 kb on - strandat 2395.289 kb on + strandat 2395.290 kb on - strandat 2395.290 kb on - strandat 2395.425 kb on - strandat 2395.461 kb on + strandat 2395.461 kb on + strandat 2395.462 kb on - strandat 2395.467 kb on - strandat 2395.585 kb on - strandat 2395.585 kb on - strandat 2395.819 kb on + strand, within EX28DRAFT_2375at 2395.851 kb on - strand, within EX28DRAFT_2375at 2396.219 kb on - strand, within EX28DRAFT_2375at 2396.281 kb on + strand, within EX28DRAFT_2375

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM
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2,393,277 - EX28DRAFT_2373 0.44 -0.9
2,393,468 - EX28DRAFT_2373 0.56 -3.5
2,393,468 - EX28DRAFT_2373 0.56 -0.4
2,393,468 - EX28DRAFT_2373 0.56 +0.6
2,393,472 - EX28DRAFT_2373 0.56 -1.2
2,393,472 - EX28DRAFT_2373 0.56 +0.2
2,393,497 + EX28DRAFT_2373 0.58 -0.3
2,393,548 + EX28DRAFT_2373 0.61 -0.3
2,393,549 - EX28DRAFT_2373 0.61 -1.3
2,393,915 - EX28DRAFT_2373 0.84 +0.2
2,393,915 - EX28DRAFT_2373 0.84 +1.7
2,394,158 + +0.3
2,394,668 + EX28DRAFT_2374 0.41 +0.1
2,394,690 + EX28DRAFT_2374 0.43 +1.3
2,394,690 + EX28DRAFT_2374 0.43 -0.2
2,394,690 + EX28DRAFT_2374 0.43 +2.6
2,394,691 - EX28DRAFT_2374 0.43 -0.3
2,395,037 - EX28DRAFT_2374 0.73 +0.9
2,395,269 - -1.8
2,395,289 + -0.3
2,395,290 - +0.3
2,395,290 - +0.0
2,395,425 - -0.8
2,395,461 + +0.4
2,395,461 + -0.4
2,395,462 - +0.2
2,395,467 - -0.8
2,395,585 - -0.9
2,395,585 - -0.1
2,395,819 + EX28DRAFT_2375 0.28 -1.3
2,395,851 - EX28DRAFT_2375 0.32 +0.4
2,396,219 - EX28DRAFT_2375 0.70 -0.3
2,396,281 + EX28DRAFT_2375 0.76 -0.4

Or see this region's nucleotide sequence