Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2373 and EX28DRAFT_2374 are separated by 9 nucleotides EX28DRAFT_2374 and EX28DRAFT_2375 are separated by 188 nucleotides
EX28DRAFT_2373: EX28DRAFT_2373 - 2,3-dihydroxybenzoate-AMP ligase, at 2,392,563 to 2,394,173
_2373
EX28DRAFT_2374: EX28DRAFT_2374 - isochorismate synthase (EC 5.4.4.2), at 2,394,183 to 2,395,358
_2374
EX28DRAFT_2375: EX28DRAFT_2375 - ABC-type Fe2+-enterobactin transport system, periplasmic component, at 2,395,547 to 2,396,506
_2375
Position (kb)
2394
2395
2396 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2393.277 kb on - strand, within EX28DRAFT_2373 at 2393.468 kb on - strand, within EX28DRAFT_2373 at 2393.468 kb on - strand, within EX28DRAFT_2373 at 2393.468 kb on - strand, within EX28DRAFT_2373 at 2393.472 kb on - strand, within EX28DRAFT_2373 at 2393.472 kb on - strand, within EX28DRAFT_2373 at 2393.497 kb on + strand, within EX28DRAFT_2373 at 2393.548 kb on + strand, within EX28DRAFT_2373 at 2393.549 kb on - strand, within EX28DRAFT_2373 at 2393.915 kb on - strand, within EX28DRAFT_2373 at 2393.915 kb on - strand, within EX28DRAFT_2373 at 2394.158 kb on + strand at 2394.668 kb on + strand, within EX28DRAFT_2374 at 2394.690 kb on + strand, within EX28DRAFT_2374 at 2394.690 kb on + strand, within EX28DRAFT_2374 at 2394.690 kb on + strand, within EX28DRAFT_2374 at 2394.691 kb on - strand, within EX28DRAFT_2374 at 2395.037 kb on - strand, within EX28DRAFT_2374 at 2395.269 kb on - strand at 2395.289 kb on + strand at 2395.290 kb on - strand at 2395.290 kb on - strand at 2395.425 kb on - strand at 2395.461 kb on + strand at 2395.461 kb on + strand at 2395.462 kb on - strand at 2395.467 kb on - strand at 2395.585 kb on - strand at 2395.585 kb on - strand at 2395.819 kb on + strand, within EX28DRAFT_2375 at 2395.851 kb on - strand, within EX28DRAFT_2375 at 2396.219 kb on - strand, within EX28DRAFT_2375 at 2396.281 kb on + strand, within EX28DRAFT_2375
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 2,393,277 - EX28DRAFT_2373 0.44 -0.9 2,393,468 - EX28DRAFT_2373 0.56 -3.5 2,393,468 - EX28DRAFT_2373 0.56 -0.4 2,393,468 - EX28DRAFT_2373 0.56 +0.6 2,393,472 - EX28DRAFT_2373 0.56 -1.2 2,393,472 - EX28DRAFT_2373 0.56 +0.2 2,393,497 + EX28DRAFT_2373 0.58 -0.3 2,393,548 + EX28DRAFT_2373 0.61 -0.3 2,393,549 - EX28DRAFT_2373 0.61 -1.3 2,393,915 - EX28DRAFT_2373 0.84 +0.2 2,393,915 - EX28DRAFT_2373 0.84 +1.7 2,394,158 + +0.3 2,394,668 + EX28DRAFT_2374 0.41 +0.1 2,394,690 + EX28DRAFT_2374 0.43 +1.3 2,394,690 + EX28DRAFT_2374 0.43 -0.2 2,394,690 + EX28DRAFT_2374 0.43 +2.6 2,394,691 - EX28DRAFT_2374 0.43 -0.3 2,395,037 - EX28DRAFT_2374 0.73 +0.9 2,395,269 - -1.8 2,395,289 + -0.3 2,395,290 - +0.3 2,395,290 - +0.0 2,395,425 - -0.8 2,395,461 + +0.4 2,395,461 + -0.4 2,395,462 - +0.2 2,395,467 - -0.8 2,395,585 - -0.9 2,395,585 - -0.1 2,395,819 + EX28DRAFT_2375 0.28 -1.3 2,395,851 - EX28DRAFT_2375 0.32 +0.4 2,396,219 - EX28DRAFT_2375 0.70 -0.3 2,396,281 + EX28DRAFT_2375 0.76 -0.4
Or see this region's nucleotide sequence