Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1095 and EX28DRAFT_1096 overlap by 1 nucleotides EX28DRAFT_1096 and EX28DRAFT_1097 overlap by 4 nucleotides EX28DRAFT_1097 and EX28DRAFT_1098 are separated by 10 nucleotides
EX28DRAFT_1095: EX28DRAFT_1095 - ATPase components of various ABC-type transport systems, contain duplicated ATPase, at 1,106,424 to 1,108,031
_1095
EX28DRAFT_1096: EX28DRAFT_1096 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 1,108,031 to 1,108,879
_1096
EX28DRAFT_1097: EX28DRAFT_1097 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 1,108,876 to 1,109,820
_1097
EX28DRAFT_1098: EX28DRAFT_1098 - ABC transporter substrate binding protein, KPN_01854 family, at 1,109,831 to 1,111,450
_1098
Position (kb) 1108
1109 Strain fitness (log2 ratio) -1
0
1
2 at 1107.107 kb on + strand, within EX28DRAFT_1095 at 1107.687 kb on - strand, within EX28DRAFT_1095 at 1107.828 kb on + strand, within EX28DRAFT_1095 at 1108.134 kb on + strand, within EX28DRAFT_1096 at 1108.134 kb on + strand, within EX28DRAFT_1096 at 1108.134 kb on + strand, within EX28DRAFT_1096 at 1108.135 kb on - strand, within EX28DRAFT_1096 at 1108.135 kb on - strand, within EX28DRAFT_1096 at 1108.191 kb on + strand, within EX28DRAFT_1096 at 1108.341 kb on + strand, within EX28DRAFT_1096 at 1108.636 kb on + strand, within EX28DRAFT_1096 at 1108.644 kb on + strand, within EX28DRAFT_1096 at 1108.644 kb on + strand, within EX28DRAFT_1096 at 1108.645 kb on - strand, within EX28DRAFT_1096 at 1108.734 kb on + strand, within EX28DRAFT_1096 at 1108.863 kb on + strand at 1108.993 kb on + strand, within EX28DRAFT_1097 at 1108.994 kb on - strand, within EX28DRAFT_1097 at 1109.395 kb on - strand, within EX28DRAFT_1097 at 1109.422 kb on - strand, within EX28DRAFT_1097 at 1109.422 kb on - strand, within EX28DRAFT_1097 at 1109.648 kb on + strand, within EX28DRAFT_1097 at 1109.683 kb on + strand, within EX28DRAFT_1097
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 1,107,107 + EX28DRAFT_1095 0.42 -0.0 1,107,687 - EX28DRAFT_1095 0.79 +0.1 1,107,828 + EX28DRAFT_1095 0.87 +0.1 1,108,134 + EX28DRAFT_1096 0.12 +0.3 1,108,134 + EX28DRAFT_1096 0.12 +0.2 1,108,134 + EX28DRAFT_1096 0.12 +0.3 1,108,135 - EX28DRAFT_1096 0.12 +2.4 1,108,135 - EX28DRAFT_1096 0.12 -0.7 1,108,191 + EX28DRAFT_1096 0.19 +0.1 1,108,341 + EX28DRAFT_1096 0.37 +0.3 1,108,636 + EX28DRAFT_1096 0.71 +0.5 1,108,644 + EX28DRAFT_1096 0.72 +0.9 1,108,644 + EX28DRAFT_1096 0.72 -0.3 1,108,645 - EX28DRAFT_1096 0.72 +0.5 1,108,734 + EX28DRAFT_1096 0.83 +1.2 1,108,863 + -1.1 1,108,993 + EX28DRAFT_1097 0.12 -1.5 1,108,994 - EX28DRAFT_1097 0.12 -0.6 1,109,395 - EX28DRAFT_1097 0.55 +0.2 1,109,422 - EX28DRAFT_1097 0.58 +0.0 1,109,422 - EX28DRAFT_1097 0.58 +0.9 1,109,648 + EX28DRAFT_1097 0.82 +1.1 1,109,683 + EX28DRAFT_1097 0.85 +0.3
Or see this region's nucleotide sequence