Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0766

Experiment: M9 with sucrose and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0765 and EX28DRAFT_0766 are separated by 321 nucleotidesEX28DRAFT_0766 and EX28DRAFT_0767 are separated by 9 nucleotides EX28DRAFT_0765: EX28DRAFT_0765 - Uncharacterized conserved protein, at 760,738 to 762,270 _0765 EX28DRAFT_0766: EX28DRAFT_0766 - Glycine/D-amino acid oxidases (deaminating), at 762,592 to 763,890 _0766 EX28DRAFT_0767: EX28DRAFT_0767 - alanine racemase, at 763,900 to 764,970 _0767 Position (kb) 762 763 764Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 761.648 kb on + strand, within EX28DRAFT_0765at 761.649 kb on - strand, within EX28DRAFT_0765at 761.712 kb on - strand, within EX28DRAFT_0765at 761.800 kb on - strand, within EX28DRAFT_0765at 761.804 kb on + strand, within EX28DRAFT_0765at 761.804 kb on + strand, within EX28DRAFT_0765at 761.804 kb on + strand, within EX28DRAFT_0765at 761.805 kb on - strand, within EX28DRAFT_0765at 761.867 kb on + strand, within EX28DRAFT_0765at 761.872 kb on - strand, within EX28DRAFT_0765at 761.950 kb on + strand, within EX28DRAFT_0765at 761.950 kb on + strand, within EX28DRAFT_0765at 761.951 kb on - strand, within EX28DRAFT_0765at 761.955 kb on - strand, within EX28DRAFT_0765at 761.977 kb on - strand, within EX28DRAFT_0765at 761.990 kb on + strand, within EX28DRAFT_0765at 762.015 kb on + strand, within EX28DRAFT_0765at 762.015 kb on + strand, within EX28DRAFT_0765at 762.015 kb on + strand, within EX28DRAFT_0765at 762.016 kb on - strand, within EX28DRAFT_0765at 762.016 kb on - strand, within EX28DRAFT_0765at 762.016 kb on - strand, within EX28DRAFT_0765at 762.017 kb on + strand, within EX28DRAFT_0765at 762.018 kb on - strand, within EX28DRAFT_0765at 762.018 kb on - strand, within EX28DRAFT_0765at 762.018 kb on - strand, within EX28DRAFT_0765at 762.018 kb on - strand, within EX28DRAFT_0765at 762.018 kb on - strand, within EX28DRAFT_0765at 762.069 kb on + strand, within EX28DRAFT_0765at 762.069 kb on + strand, within EX28DRAFT_0765at 762.070 kb on - strand, within EX28DRAFT_0765at 762.070 kb on - strand, within EX28DRAFT_0765at 762.070 kb on - strand, within EX28DRAFT_0765at 762.117 kb on + strandat 762.118 kb on - strandat 762.145 kb on - strandat 762.189 kb on - strandat 762.325 kb on + strandat 762.325 kb on + strandat 762.325 kb on + strandat 762.495 kb on + strandat 762.495 kb on + strandat 762.579 kb on + strandat 762.579 kb on + strandat 762.605 kb on + strandat 762.606 kb on - strandat 762.644 kb on - strandat 762.644 kb on - strandat 762.647 kb on + strandat 762.647 kb on + strandat 762.647 kb on + strandat 762.647 kb on + strandat 762.648 kb on - strandat 762.648 kb on - strandat 762.668 kb on + strandat 762.893 kb on - strand, within EX28DRAFT_0766at 762.931 kb on + strand, within EX28DRAFT_0766at 763.143 kb on + strand, within EX28DRAFT_0766at 763.201 kb on - strand, within EX28DRAFT_0766at 763.336 kb on + strand, within EX28DRAFT_0766at 763.337 kb on - strand, within EX28DRAFT_0766at 763.481 kb on - strand, within EX28DRAFT_0766at 763.849 kb on - strandat 763.884 kb on + strandat 763.889 kb on - strandat 763.889 kb on - strandat 764.008 kb on - strand, within EX28DRAFT_0767at 764.008 kb on - strand, within EX28DRAFT_0767at 764.180 kb on - strand, within EX28DRAFT_0767at 764.180 kb on - strand, within EX28DRAFT_0767at 764.257 kb on - strand, within EX28DRAFT_0767at 764.260 kb on + strand, within EX28DRAFT_0767at 764.260 kb on + strand, within EX28DRAFT_0767at 764.260 kb on + strand, within EX28DRAFT_0767at 764.260 kb on + strand, within EX28DRAFT_0767at 764.261 kb on - strand, within EX28DRAFT_0767at 764.261 kb on - strand, within EX28DRAFT_0767at 764.261 kb on - strand, within EX28DRAFT_0767at 764.261 kb on - strand, within EX28DRAFT_0767at 764.316 kb on + strand, within EX28DRAFT_0767at 764.404 kb on - strand, within EX28DRAFT_0767at 764.506 kb on + strand, within EX28DRAFT_0767at 764.508 kb on + strand, within EX28DRAFT_0767at 764.536 kb on + strand, within EX28DRAFT_0767at 764.536 kb on + strand, within EX28DRAFT_0767at 764.795 kb on + strand, within EX28DRAFT_0767at 764.795 kb on + strand, within EX28DRAFT_0767at 764.795 kb on + strand, within EX28DRAFT_0767at 764.796 kb on - strand, within EX28DRAFT_0767at 764.799 kb on + strand, within EX28DRAFT_0767at 764.799 kb on + strand, within EX28DRAFT_0767at 764.806 kb on - strand, within EX28DRAFT_0767

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM
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761,648 + EX28DRAFT_0765 0.59 -0.5
761,649 - EX28DRAFT_0765 0.59 +0.9
761,712 - EX28DRAFT_0765 0.64 -0.2
761,800 - EX28DRAFT_0765 0.69 -0.7
761,804 + EX28DRAFT_0765 0.70 +0.9
761,804 + EX28DRAFT_0765 0.70 +1.4
761,804 + EX28DRAFT_0765 0.70 -0.3
761,805 - EX28DRAFT_0765 0.70 -0.5
761,867 + EX28DRAFT_0765 0.74 +0.6
761,872 - EX28DRAFT_0765 0.74 +0.6
761,950 + EX28DRAFT_0765 0.79 -0.4
761,950 + EX28DRAFT_0765 0.79 -0.5
761,951 - EX28DRAFT_0765 0.79 +0.5
761,955 - EX28DRAFT_0765 0.79 +1.2
761,977 - EX28DRAFT_0765 0.81 -1.0
761,990 + EX28DRAFT_0765 0.82 -0.1
762,015 + EX28DRAFT_0765 0.83 -0.1
762,015 + EX28DRAFT_0765 0.83 +0.4
762,015 + EX28DRAFT_0765 0.83 -3.1
762,016 - EX28DRAFT_0765 0.83 +1.0
762,016 - EX28DRAFT_0765 0.83 -0.1
762,016 - EX28DRAFT_0765 0.83 +1.1
762,017 + EX28DRAFT_0765 0.83 -0.7
762,018 - EX28DRAFT_0765 0.83 -0.7
762,018 - EX28DRAFT_0765 0.83 -0.3
762,018 - EX28DRAFT_0765 0.83 +0.7
762,018 - EX28DRAFT_0765 0.83 +0.9
762,018 - EX28DRAFT_0765 0.83 -0.1
762,069 + EX28DRAFT_0765 0.87 +1.2
762,069 + EX28DRAFT_0765 0.87 +0.5
762,070 - EX28DRAFT_0765 0.87 -0.1
762,070 - EX28DRAFT_0765 0.87 -0.3
762,070 - EX28DRAFT_0765 0.87 +2.2
762,117 + +0.5
762,118 - +0.1
762,145 - -0.9
762,189 - +0.4
762,325 + -0.5
762,325 + +1.3
762,325 + +0.7
762,495 + -0.3
762,495 + +1.3
762,579 + +0.1
762,579 + +0.4
762,605 + +0.4
762,606 - +0.4
762,644 - -3.3
762,644 - -0.2
762,647 + +0.2
762,647 + +1.2
762,647 + +0.3
762,647 + -0.6
762,648 - -2.5
762,648 - -0.4
762,668 + -0.2
762,893 - EX28DRAFT_0766 0.23 -1.0
762,931 + EX28DRAFT_0766 0.26 -0.5
763,143 + EX28DRAFT_0766 0.42 -1.1
763,201 - EX28DRAFT_0766 0.47 -0.3
763,336 + EX28DRAFT_0766 0.57 -2.5
763,337 - EX28DRAFT_0766 0.57 -1.7
763,481 - EX28DRAFT_0766 0.68 -4.0
763,849 - -0.1
763,884 + -0.2
763,889 - +0.8
763,889 - -1.1
764,008 - EX28DRAFT_0767 0.10 +0.5
764,008 - EX28DRAFT_0767 0.10 -0.5
764,180 - EX28DRAFT_0767 0.26 -1.1
764,180 - EX28DRAFT_0767 0.26 -3.3
764,257 - EX28DRAFT_0767 0.33 +1.1
764,260 + EX28DRAFT_0767 0.34 -0.5
764,260 + EX28DRAFT_0767 0.34 -0.0
764,260 + EX28DRAFT_0767 0.34 +1.9
764,260 + EX28DRAFT_0767 0.34 -0.2
764,261 - EX28DRAFT_0767 0.34 -1.1
764,261 - EX28DRAFT_0767 0.34 -0.5
764,261 - EX28DRAFT_0767 0.34 -0.9
764,261 - EX28DRAFT_0767 0.34 -2.9
764,316 + EX28DRAFT_0767 0.39 -0.3
764,404 - EX28DRAFT_0767 0.47 -0.2
764,506 + EX28DRAFT_0767 0.57 +1.0
764,508 + EX28DRAFT_0767 0.57 +0.0
764,536 + EX28DRAFT_0767 0.59 -1.0
764,536 + EX28DRAFT_0767 0.59 -0.6
764,795 + EX28DRAFT_0767 0.84 +0.5
764,795 + EX28DRAFT_0767 0.84 +0.6
764,795 + EX28DRAFT_0767 0.84 +0.5
764,796 - EX28DRAFT_0767 0.84 -2.5
764,799 + EX28DRAFT_0767 0.84 +0.1
764,799 + EX28DRAFT_0767 0.84 +0.2
764,806 - EX28DRAFT_0767 0.85 -0.1

Or see this region's nucleotide sequence