Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0743 and EX28DRAFT_0744 are separated by 6 nucleotides EX28DRAFT_0744 and EX28DRAFT_0745 are separated by 130 nucleotides
EX28DRAFT_0743: EX28DRAFT_0743 - Membrane protein TerC, possibly involved in tellurium resistance, at 740,009 to 741,568
_0743
EX28DRAFT_0744: EX28DRAFT_0744 - FOG: EAL domain, at 741,575 to 743,173
_0744
EX28DRAFT_0745: EX28DRAFT_0745 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 743,304 to 744,668
_0745
Position (kb) 741
742
743
744 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 740.578 kb on + strand, within EX28DRAFT_0743 at 740.579 kb on - strand, within EX28DRAFT_0743 at 740.632 kb on + strand, within EX28DRAFT_0743 at 740.633 kb on - strand, within EX28DRAFT_0743 at 740.645 kb on + strand, within EX28DRAFT_0743 at 740.713 kb on + strand, within EX28DRAFT_0743 at 740.714 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 741.236 kb on - strand, within EX28DRAFT_0743 at 741.566 kb on + strand at 741.682 kb on - strand at 741.704 kb on + strand at 741.724 kb on - strand at 741.800 kb on - strand, within EX28DRAFT_0744 at 742.065 kb on - strand, within EX28DRAFT_0744 at 742.065 kb on - strand, within EX28DRAFT_0744 at 742.067 kb on + strand, within EX28DRAFT_0744 at 742.067 kb on + strand, within EX28DRAFT_0744 at 742.105 kb on + strand, within EX28DRAFT_0744 at 742.106 kb on - strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.138 kb on - strand, within EX28DRAFT_0744 at 742.143 kb on - strand, within EX28DRAFT_0744 at 742.170 kb on + strand, within EX28DRAFT_0744 at 742.366 kb on + strand, within EX28DRAFT_0744 at 742.367 kb on - strand, within EX28DRAFT_0744 at 742.467 kb on - strand, within EX28DRAFT_0744 at 742.738 kb on + strand, within EX28DRAFT_0744 at 742.744 kb on + strand, within EX28DRAFT_0744 at 742.745 kb on - strand, within EX28DRAFT_0744 at 743.068 kb on + strand at 743.082 kb on - strand at 743.143 kb on - strand at 743.222 kb on - strand at 743.302 kb on + strand at 743.305 kb on + strand at 743.306 kb on - strand at 743.322 kb on - strand at 743.384 kb on - strand at 743.384 kb on - strand at 743.387 kb on + strand at 743.388 kb on - strand at 743.388 kb on - strand at 743.445 kb on - strand, within EX28DRAFT_0745 at 743.544 kb on - strand, within EX28DRAFT_0745 at 743.693 kb on - strand, within EX28DRAFT_0745 at 743.734 kb on + strand, within EX28DRAFT_0745 at 743.735 kb on - strand, within EX28DRAFT_0745 at 743.760 kb on - strand, within EX28DRAFT_0745 at 743.771 kb on - strand, within EX28DRAFT_0745 at 743.771 kb on - strand, within EX28DRAFT_0745 at 743.934 kb on - strand, within EX28DRAFT_0745 at 744.130 kb on + strand, within EX28DRAFT_0745
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 740,578 + EX28DRAFT_0743 0.36 +1.6 740,579 - EX28DRAFT_0743 0.37 +0.5 740,632 + EX28DRAFT_0743 0.40 +0.1 740,633 - EX28DRAFT_0743 0.40 +0.4 740,645 + EX28DRAFT_0743 0.41 +1.5 740,713 + EX28DRAFT_0743 0.45 -0.2 740,714 - EX28DRAFT_0743 0.45 -0.1 740,870 - EX28DRAFT_0743 0.55 +1.3 740,870 - EX28DRAFT_0743 0.55 -1.7 740,870 - EX28DRAFT_0743 0.55 +0.1 741,236 - EX28DRAFT_0743 0.79 +1.0 741,566 + -0.1 741,682 - +0.4 741,704 + +0.7 741,724 - -0.3 741,800 - EX28DRAFT_0744 0.14 +0.3 742,065 - EX28DRAFT_0744 0.31 +0.0 742,065 - EX28DRAFT_0744 0.31 -0.6 742,067 + EX28DRAFT_0744 0.31 +0.8 742,067 + EX28DRAFT_0744 0.31 +0.2 742,105 + EX28DRAFT_0744 0.33 -0.8 742,106 - EX28DRAFT_0744 0.33 -1.9 742,137 + EX28DRAFT_0744 0.35 +2.5 742,137 + EX28DRAFT_0744 0.35 -2.1 742,137 + EX28DRAFT_0744 0.35 +0.6 742,138 - EX28DRAFT_0744 0.35 -0.6 742,143 - EX28DRAFT_0744 0.36 -0.7 742,170 + EX28DRAFT_0744 0.37 -0.2 742,366 + EX28DRAFT_0744 0.49 -0.7 742,367 - EX28DRAFT_0744 0.50 +0.2 742,467 - EX28DRAFT_0744 0.56 -0.1 742,738 + EX28DRAFT_0744 0.73 -0.6 742,744 + EX28DRAFT_0744 0.73 -1.0 742,745 - EX28DRAFT_0744 0.73 -0.1 743,068 + +0.0 743,082 - -0.6 743,143 - +0.2 743,222 - +1.5 743,302 + +0.4 743,305 + -0.2 743,306 - -0.2 743,322 - +1.1 743,384 - -0.3 743,384 - -1.1 743,387 + +0.7 743,388 - -0.1 743,388 - -2.9 743,445 - EX28DRAFT_0745 0.10 -0.5 743,544 - EX28DRAFT_0745 0.18 -0.1 743,693 - EX28DRAFT_0745 0.28 -1.2 743,734 + EX28DRAFT_0745 0.32 +0.5 743,735 - EX28DRAFT_0745 0.32 +0.4 743,760 - EX28DRAFT_0745 0.33 +0.0 743,771 - EX28DRAFT_0745 0.34 +1.1 743,771 - EX28DRAFT_0745 0.34 -0.6 743,934 - EX28DRAFT_0745 0.46 -0.1 744,130 + EX28DRAFT_0745 0.61 +0.3
Or see this region's nucleotide sequence