Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0429 and EX28DRAFT_0430 are separated by 145 nucleotides EX28DRAFT_0430 and EX28DRAFT_0431 are separated by 12 nucleotides
EX28DRAFT_0429: EX28DRAFT_0429 - Beta-glucosidase-related glycosidases, at 409,046 to 411,343
_0429
EX28DRAFT_0430: EX28DRAFT_0430 - Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein), at 411,489 to 412,406
_0430
EX28DRAFT_0431: EX28DRAFT_0431 - ABC-type proline/glycine betaine transport systems, permease component, at 412,419 to 413,576
_0431
Position (kb) 411
412
413 Strain fitness (log2 ratio) -1
0
1 at 410.810 kb on + strand, within EX28DRAFT_0429 at 410.811 kb on - strand, within EX28DRAFT_0429 at 410.811 kb on - strand, within EX28DRAFT_0429 at 410.874 kb on - strand, within EX28DRAFT_0429 at 410.925 kb on - strand, within EX28DRAFT_0429 at 411.113 kb on + strand, within EX28DRAFT_0429 at 411.113 kb on + strand, within EX28DRAFT_0429 at 411.113 kb on + strand, within EX28DRAFT_0429 at 411.260 kb on + strand at 411.260 kb on + strand at 411.387 kb on - strand at 411.395 kb on + strand at 411.431 kb on - strand at 411.431 kb on - strand at 411.431 kb on - strand at 411.431 kb on - strand at 411.431 kb on - strand at 411.436 kb on - strand at 411.615 kb on - strand, within EX28DRAFT_0430 at 411.617 kb on + strand, within EX28DRAFT_0430 at 411.719 kb on + strand, within EX28DRAFT_0430 at 411.719 kb on + strand, within EX28DRAFT_0430 at 411.915 kb on - strand, within EX28DRAFT_0430 at 411.969 kb on - strand, within EX28DRAFT_0430 at 411.969 kb on - strand, within EX28DRAFT_0430 at 412.033 kb on - strand, within EX28DRAFT_0430 at 412.204 kb on + strand, within EX28DRAFT_0430 at 412.405 kb on - strand at 412.665 kb on - strand, within EX28DRAFT_0431 at 412.703 kb on + strand, within EX28DRAFT_0431 at 412.907 kb on - strand, within EX28DRAFT_0431 at 413.083 kb on + strand, within EX28DRAFT_0431 at 413.211 kb on + strand, within EX28DRAFT_0431 at 413.211 kb on + strand, within EX28DRAFT_0431 at 413.211 kb on + strand, within EX28DRAFT_0431
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 410,810 + EX28DRAFT_0429 0.77 +0.7 410,811 - EX28DRAFT_0429 0.77 +0.1 410,811 - EX28DRAFT_0429 0.77 -0.9 410,874 - EX28DRAFT_0429 0.80 -0.4 410,925 - EX28DRAFT_0429 0.82 +0.2 411,113 + EX28DRAFT_0429 0.90 +0.1 411,113 + EX28DRAFT_0429 0.90 -0.8 411,113 + EX28DRAFT_0429 0.90 +0.6 411,260 + -0.1 411,260 + +1.0 411,387 - +0.2 411,395 + +0.2 411,431 - +0.2 411,431 - +0.3 411,431 - +0.3 411,431 - +0.9 411,431 - +0.3 411,436 - +0.6 411,615 - EX28DRAFT_0430 0.14 +0.3 411,617 + EX28DRAFT_0430 0.14 +0.1 411,719 + EX28DRAFT_0430 0.25 -0.9 411,719 + EX28DRAFT_0430 0.25 +0.5 411,915 - EX28DRAFT_0430 0.46 +0.6 411,969 - EX28DRAFT_0430 0.52 +0.4 411,969 - EX28DRAFT_0430 0.52 +0.3 412,033 - EX28DRAFT_0430 0.59 +0.2 412,204 + EX28DRAFT_0430 0.78 +0.4 412,405 - -0.5 412,665 - EX28DRAFT_0431 0.21 -0.8 412,703 + EX28DRAFT_0431 0.25 -0.2 412,907 - EX28DRAFT_0431 0.42 +0.7 413,083 + EX28DRAFT_0431 0.57 +0.1 413,211 + EX28DRAFT_0431 0.68 -0.3 413,211 + EX28DRAFT_0431 0.68 -0.3 413,211 + EX28DRAFT_0431 0.68 +0.4
Or see this region's nucleotide sequence