Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS11935

Experiment: L-Tryptophan (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (C)
2,323,236	+		ABIE40_RS11930	0.35	+0.2
2,323,237	-		ABIE40_RS11930	0.36	+0.9
2,323,289	+		ABIE40_RS11930	0.40	-0.5
2,323,289	+		ABIE40_RS11930	0.40	+1.2
2,323,290	-		ABIE40_RS11930	0.40	-1.0
2,323,290	-		ABIE40_RS11930	0.40	-0.8
2,323,290	-		ABIE40_RS11930	0.40	+0.8
2,323,290	-		ABIE40_RS11930	0.40	-0.2
2,323,293	+		ABIE40_RS11930	0.40	-2.2
2,323,293	+		ABIE40_RS11930	0.40	-0.3
2,323,293	+		ABIE40_RS11930	0.40	-2.0
2,323,293	+		ABIE40_RS11930	0.40	+2.1
2,323,293	+		ABIE40_RS11930	0.40	+0.1
2,323,293	+		ABIE40_RS11930	0.40	+1.5
2,323,293	+		ABIE40_RS11930	0.40	+1.5
2,323,294	-		ABIE40_RS11930	0.40	-2.8
2,323,294	-		ABIE40_RS11930	0.40	+0.2
2,323,509	+		ABIE40_RS11930	0.57	+0.8
2,323,509	+		ABIE40_RS11930	0.57	-0.1
2,323,510	-		ABIE40_RS11930	0.57	+1.4
2,323,510	-		ABIE40_RS11930	0.57	+0.8
2,323,510	-		ABIE40_RS11930	0.57	+0.4
2,323,608	+		ABIE40_RS11930	0.65	-0.8
2,323,608	+		ABIE40_RS11930	0.65	+1.0
2,323,608	+		ABIE40_RS11930	0.65	-0.7
2,323,609	-		ABIE40_RS11930	0.65	+0.5
2,323,609	-		ABIE40_RS11930	0.65	-0.3
2,323,671	+		ABIE40_RS11930	0.70	+0.6
2,323,671	+		ABIE40_RS11930	0.70	-0.1
2,323,672	-		ABIE40_RS11930	0.70	-0.4
2,323,689	+		ABIE40_RS11930	0.72	+1.0
2,323,785	+		ABIE40_RS11930	0.80	-0.6
2,323,785	+		ABIE40_RS11930	0.80	+0.0
2,323,785	+		ABIE40_RS11930	0.80	+0.5
2,323,785	+		ABIE40_RS11930	0.80	-0.3
2,323,785	+		ABIE40_RS11930	0.80	+0.4
2,323,786	-		ABIE40_RS11930	0.80	-0.2
2,323,953	+				-0.2
2,323,954	-				-0.5
2,323,954	-				+0.3
2,323,954	-				+1.0
2,323,954	-				+0.2
2,324,004	+				-0.2
2,324,004	+				-2.5
2,324,004	+				-1.3
2,324,004	+				-0.8
2,324,004	+				+2.2
2,324,005	-				-2.7
2,324,005	-				-3.6
2,324,005	-				-0.6
2,324,005	-				-1.0
2,324,023	-				-2.2
2,324,102	+				+0.2
2,324,102	+				+1.2
2,324,102	+				-1.3
2,324,102	+				-0.6
2,324,103	-				-0.2
2,324,103	-				-0.0
2,324,103	-				-0.8
2,324,103	-				-1.9
2,324,103	-				+0.5
2,324,103	-				+0.5
2,324,103	-				-0.3
2,324,123	+				-0.4
2,324,123	+				+0.3
2,324,123	+				-1.1
2,324,123	+				+1.5
2,324,123	+				+0.1
2,324,123	+				-0.0
2,324,124	-				+0.1
2,324,141	+				-1.8
2,324,141	+				-0.3
2,324,141	+				-1.5
2,324,142	-				-0.6
2,324,144	+				+0.7
2,324,145	-				-0.9
2,324,424	-		ABIE40_RS11935	0.54	-1.9
2,324,503	+		ABIE40_RS11935	0.67	-1.7
2,324,708	+				+0.5
2,324,708	+				+0.5
2,324,724	-				+0.5
2,324,735	+				-1.4
2,324,736	-				-0.4
2,324,742	+				+0.7
2,324,743	+				-0.8
2,324,743	+				+0.4
2,324,743	+				+0.4
2,324,743	+				-0.3
2,324,743	+				+0.1
2,324,744	-				+1.5
2,324,744	-				-0.8
2,324,744	-				+0.9
2,324,761	-				+0.7
2,324,806	+				+0.3
2,324,806	+				-0.8
2,324,818	+				-0.4
2,324,819	-				+0.1
2,324,819	-				+0.2
2,324,819	-				-1.4
2,324,819	-				+0.2
2,324,902	-				+0.6
2,324,907	+				-1.0
2,324,908	-				-3.1
2,324,908	-				-0.2
2,324,993	+		ABIE40_RS11940	0.20	-0.0
2,325,124	-		ABIE40_RS11940	0.36	+1.3
2,325,174	+		ABIE40_RS11940	0.43	+0.3
2,325,177	+		ABIE40_RS11940	0.43	+1.0
2,325,177	+		ABIE40_RS11940	0.43	-2.5
2,325,178	-		ABIE40_RS11940	0.43	-0.8
2,325,178	-		ABIE40_RS11940	0.43	+1.5
2,325,178	-		ABIE40_RS11940	0.43	-0.6
2,325,178	-		ABIE40_RS11940	0.43	-0.0
2,325,319	+		ABIE40_RS11940	0.61	-0.5
2,325,319	+		ABIE40_RS11940	0.61	+0.8
2,325,319	+		ABIE40_RS11940	0.61	-0.5
2,325,319	+		ABIE40_RS11940	0.61	-1.0
2,325,319	+		ABIE40_RS11940	0.61	+1.4
2,325,319	+		ABIE40_RS11940	0.61	-1.4
2,325,319	+		ABIE40_RS11940	0.61	+0.7
2,325,320	-		ABIE40_RS11940	0.61	-2.3
2,325,320	-		ABIE40_RS11940	0.61	-1.6
2,325,360	+		ABIE40_RS11940	0.66	-1.3
2,325,360	+		ABIE40_RS11940	0.66	-0.3
2,325,360	+		ABIE40_RS11940	0.66	+0.1
2,325,360	+		ABIE40_RS11940	0.66	+0.7
2,325,361	-		ABIE40_RS11940	0.66	-0.5
2,325,361	-		ABIE40_RS11940	0.66	-0.5
2,325,361	-		ABIE40_RS11940	0.66	-1.0
2,325,364	-		ABIE40_RS11940	0.67	+0.0
2,325,384	+		ABIE40_RS11940	0.69	-0.8
2,325,384	+		ABIE40_RS11940	0.69	+0.2
2,325,385	-		ABIE40_RS11940	0.69	-2.8
2,325,385	-		ABIE40_RS11940	0.69	-1.1
2,325,385	-		ABIE40_RS11940	0.69	+0.1
2,325,385	-		ABIE40_RS11940	0.69	-1.6
2,325,385	-		ABIE40_RS11940	0.69	+2.1
2,325,385	-		ABIE40_RS11940	0.69	+1.0
2,325,423	+		ABIE40_RS11940	0.74	-0.3
2,325,424	-		ABIE40_RS11940	0.74	-2.3
2,325,435	+		ABIE40_RS11940	0.75	-1.3
2,325,480	+		ABIE40_RS11940	0.81	-0.3
2,325,480	+		ABIE40_RS11940	0.81	-0.7
2,325,481	-		ABIE40_RS11940	0.81	-0.1
2,325,481	-		ABIE40_RS11940	0.81	-3.2
2,325,481	-		ABIE40_RS11940	0.81	+0.5
2,325,510	+		ABIE40_RS11940	0.85	-0.0
2,325,510	+		ABIE40_RS11940	0.85	-0.1
2,325,510	+		ABIE40_RS11940	0.85	-0.2
2,325,510	+		ABIE40_RS11940	0.85	-0.5
2,325,511	-		ABIE40_RS11940	0.85	-0.3
2,325,511	-		ABIE40_RS11940	0.85	+0.7
2,325,512	+		ABIE40_RS11940	0.85	-1.3
2,325,512	+		ABIE40_RS11940	0.85	-1.5
2,325,512	+		ABIE40_RS11940	0.85	+0.9
2,325,513	-		ABIE40_RS11940	0.85	-1.3
2,325,513	-		ABIE40_RS11940	0.85	-0.2
2,325,513	-		ABIE40_RS11940	0.85	-1.9
2,325,686	+				-0.3
2,325,686	+				+0.4
2,325,687	-				-0.3
2,325,695	+				-3.2
2,325,695	+				+0.7
2,325,697	+				+0.8
2,325,697	+				-1.5
2,325,698	-				+1.5