Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1672

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
1,949,190	+		Echvi_1671	0.20	-0.2
1,949,247	+		Echvi_1671	0.26	+0.5
1,949,313	+		Echvi_1671	0.32	-1.8
1,949,313	+		Echvi_1671	0.32	+0.3
1,949,313	+		Echvi_1671	0.32	+1.6
1,949,395	+		Echvi_1671	0.41	-0.6
1,949,474	+		Echvi_1671	0.49	+0.6
1,949,560	+		Echvi_1671	0.59	-0.4
1,949,560	+		Echvi_1671	0.59	-0.1
1,949,617	-		Echvi_1671	0.65	-1.5
1,949,696	-		Echvi_1671	0.73	-1.0
1,949,745	-		Echvi_1671	0.78	-0.1
1,949,821	-		Echvi_1671	0.86	+1.0
1,949,851	-		Echvi_1671	0.89	+1.2
1,949,932	-				+0.1
1,949,932	-				-0.0
1,950,006	+				+0.6
1,950,012	-				-0.6
1,950,085	-				-1.8
1,950,088	+				-0.9
1,950,088	+				-2.6
1,950,089	-				-1.5
1,950,089	-				-2.9
1,950,089	-				+1.5
1,950,109	+				+0.2
1,950,121	+				-0.2
1,950,144	+				-0.6
1,950,144	+				-0.0
1,950,145	-				-0.8
1,950,158	+				+0.0
1,950,158	+				+0.3
1,950,180	-				-2.0
1,950,200	+				-0.6
1,950,200	+				-1.1
1,950,206	+				-0.8
1,950,207	-				-2.0
1,950,420	+				+0.4
1,950,593	+		Echvi_1672	0.15	+0.2
1,950,594	-				+0.0
1,950,626	+		Echvi_1672	0.16	+0.0
1,950,626	+		Echvi_1672	0.16	-0.3
1,950,626	+		Echvi_1672	0.16	+1.1
1,950,627	-		Echvi_1672	0.16	-0.7
1,950,627	-		Echvi_1672	0.16	-0.5
1,950,736	-		Echvi_1672	0.19	-1.8
1,950,789	+		Echvi_1672	0.21	+0.0
1,950,792	+		Echvi_1672	0.21	+0.2
1,950,850	+		Echvi_1672	0.23	-0.3
1,950,851	-		Echvi_1672	0.23	-0.3
1,950,960	+		Echvi_1672	0.27	-0.0
1,950,960	+		Echvi_1672	0.27	-1.8
1,950,960	+		Echvi_1672	0.27	+0.4
1,950,961	-		Echvi_1672	0.27	+0.2
1,950,974	-		Echvi_1672	0.27	-0.5
1,950,989	-		Echvi_1672	0.28	+0.4
1,950,989	-		Echvi_1672	0.28	+0.0
1,951,000	-		Echvi_1672	0.28	+0.1
1,951,012	-		Echvi_1672	0.28	+0.7
1,951,061	+		Echvi_1672	0.30	-0.4
1,951,062	-		Echvi_1672	0.30	-0.6
1,951,062	-		Echvi_1672	0.30	+0.4
1,951,085	-		Echvi_1672	0.31	+0.6
1,951,085	-		Echvi_1672	0.31	-0.1
1,951,204	+		Echvi_1672	0.35	+1.7
1,951,205	-		Echvi_1672	0.35	-0.4
1,951,205	-		Echvi_1672	0.35	-0.0
1,951,228	+		Echvi_1672	0.35	+0.2
1,951,228	+		Echvi_1672	0.35	-0.1
1,951,251	-		Echvi_1672	0.36	+0.3
1,951,293	-		Echvi_1672	0.38	+0.7
1,951,316	-		Echvi_1672	0.38	-0.7
1,951,316	-		Echvi_1672	0.38	-0.7
1,951,341	-		Echvi_1672	0.39	-1.0
1,951,390	+		Echvi_1672	0.41	-0.8
1,951,393	+		Echvi_1672	0.41	-0.4
1,951,393	+		Echvi_1672	0.41	-0.6
1,951,394	-		Echvi_1672	0.41	-1.8
1,951,429	-		Echvi_1672	0.42	-1.0
1,951,550	+		Echvi_1672	0.46	+2.4
1,951,568	-		Echvi_1672	0.47	-0.1
1,951,598	-		Echvi_1672	0.48	+0.1
1,951,615	+		Echvi_1672	0.48	-2.0
1,951,657	+		Echvi_1672	0.50	+0.2
1,951,692	+		Echvi_1672	0.51	+0.9
1,951,702	+		Echvi_1672	0.51	-0.0
1,951,702	+		Echvi_1672	0.51	+1.8
1,951,703	-		Echvi_1672	0.51	+0.3
1,951,703	-		Echvi_1672	0.51	-0.5
1,951,703	-		Echvi_1672	0.51	+0.3
1,951,703	-		Echvi_1672	0.51	-0.7
1,951,707	+		Echvi_1672	0.51	+0.4
1,951,708	-		Echvi_1672	0.51	+0.0
1,951,713	+		Echvi_1672	0.51	+1.5
1,951,745	+		Echvi_1672	0.52	+2.6
1,951,745	+		Echvi_1672	0.52	+1.9
1,951,745	+		Echvi_1672	0.52	-0.5
1,951,745	+		Echvi_1672	0.52	-1.6
1,951,746	-		Echvi_1672	0.52	+1.2
1,951,746	-		Echvi_1672	0.52	-1.6
1,951,746	-		Echvi_1672	0.52	-2.2
1,951,746	-		Echvi_1672	0.52	-1.3
1,951,747	+		Echvi_1672	0.53	+0.4
1,951,748	-		Echvi_1672	0.53	+2.2
1,951,913	-		Echvi_1672	0.58	-0.1
1,951,925	-		Echvi_1672	0.58	-0.5
1,951,926	+		Echvi_1672	0.58	+2.9
1,951,926	+		Echvi_1672	0.58	-0.9
1,951,926	+		Echvi_1672	0.58	-1.6
1,951,927	-		Echvi_1672	0.58	-1.4
1,951,927	-		Echvi_1672	0.58	+0.6
1,951,965	-		Echvi_1672	0.60	+0.2
1,952,038	-		Echvi_1672	0.62	-0.0
1,952,052	+		Echvi_1672	0.63	-0.1
1,952,052	+		Echvi_1672	0.63	+0.8
1,952,062	-		Echvi_1672	0.63	+0.3
1,952,067	-		Echvi_1672	0.63	+0.9
1,952,166	+		Echvi_1672	0.66	+0.8
1,952,167	-		Echvi_1672	0.66	-0.9
1,952,170	+		Echvi_1672	0.66	+0.0
1,952,171	-		Echvi_1672	0.66	+0.0
1,952,171	-		Echvi_1672	0.66	-1.0
1,952,171	-		Echvi_1672	0.66	-1.2
1,952,171	-		Echvi_1672	0.66	+0.8
1,952,197	+		Echvi_1672	0.67	+0.3
1,952,198	-		Echvi_1672	0.67	-0.1
1,952,198	-		Echvi_1672	0.67	+0.2
1,952,198	-		Echvi_1672	0.67	-1.5
1,952,392	-		Echvi_1672	0.74	+0.6
1,952,500	+		Echvi_1672	0.77	-0.4
1,952,501	-		Echvi_1672	0.77	+0.3
1,952,585	-		Echvi_1672	0.80	+0.0
1,952,585	-		Echvi_1672	0.80	+0.4
1,952,585	-		Echvi_1672	0.80	-2.2
1,952,590	+		Echvi_1672	0.80	-0.2
1,952,590	+		Echvi_1672	0.80	-1.8
1,952,591	-		Echvi_1672	0.80	-0.5
1,952,591	-		Echvi_1672	0.80	+0.7
1,952,608	+		Echvi_1672	0.81	+0.5
1,952,763	+		Echvi_1672	0.86	-1.0
1,952,820	+		Echvi_1672	0.88	-0.3
1,952,835	-		Echvi_1672	0.88	+0.5
1,952,839	-		Echvi_1672	0.88	-0.4
1,952,839	-		Echvi_1672	0.88	-1.2
1,952,853	+		Echvi_1672	0.89	+0.5
1,952,853	+		Echvi_1672	0.89	-0.9
1,952,854	-		Echvi_1672	0.89	+1.1
1,952,854	-		Echvi_1672	0.89	-0.6
1,953,011	-				+1.4
1,953,013	-				-0.9
1,953,013	-				+0.4
1,953,133	-				-1.6
1,953,133	-				-0.2
1,953,149	-				-2.4
1,953,210	-				-1.0
1,953,222	-				-0.4
1,953,224	-				-1.1
1,953,230	+				-0.3
1,953,230	+				-0.5
1,953,231	-				+0.5
1,953,231	-				-0.1
1,953,234	+				+0.2
1,953,234	+				-0.3
1,953,256	+				-0.8
1,953,256	+				-0.8
1,953,286	+				-0.8
1,953,286	+				+0.6
1,953,287	-				-0.5
1,953,349	+				-0.5
1,953,415	-		Echvi_1673	0.12	+1.0
1,953,507	+		Echvi_1673	0.18	-0.8
1,953,521	+		Echvi_1673	0.19	-1.8
1,953,535	-		Echvi_1673	0.20	-0.8
1,953,535	-		Echvi_1673	0.20	-0.6
1,953,574	+		Echvi_1673	0.22	+0.9
1,953,604	-		Echvi_1673	0.24	+0.1
1,953,681	+		Echvi_1673	0.28	+0.4
1,953,681	+		Echvi_1673	0.28	-1.2
1,953,681	+		Echvi_1673	0.28	+0.9
1,953,682	-		Echvi_1673	0.29	-1.5
1,953,688	-		Echvi_1673	0.29	+0.6
1,953,707	-		Echvi_1673	0.30	-0.7
1,953,707	-		Echvi_1673	0.30	+1.3
1,953,785	-		Echvi_1673	0.35	-0.0
1,953,786	+		Echvi_1673	0.35	+1.6
1,953,786	+		Echvi_1673	0.35	+1.2
1,953,808	+		Echvi_1673	0.36	+0.2
1,953,847	+		Echvi_1673	0.39	+1.9
1,953,847	+		Echvi_1673	0.39	-0.6
1,953,848	-		Echvi_1673	0.39	-0.3
1,953,898	-		Echvi_1673	0.42	+1.6
1,953,903	-		Echvi_1673	0.42	-0.3
1,953,939	-		Echvi_1673	0.44	-0.6
1,953,959	+		Echvi_1673	0.45	-0.9
1,953,959	+				+0.0
1,953,959	+		Echvi_1673	0.45	-2.1
1,953,960	-		Echvi_1673	0.45	-2.2
1,953,963	+		Echvi_1673	0.46	+0.4
1,953,964	-		Echvi_1673	0.46	-0.4
1,953,964	-		Echvi_1673	0.46	-0.3
1,953,997	+		Echvi_1673	0.48	-1.5
1,953,998	-		Echvi_1673	0.48	+0.3
1,954,016	+		Echvi_1673	0.49	-1.4
1,954,017	-		Echvi_1673	0.49	+0.7
1,954,104	-		Echvi_1673	0.54	-1.0
1,954,130	+		Echvi_1673	0.56	+0.7
1,954,131	-				+0.3
1,954,193	+		Echvi_1673	0.60	+1.6
1,954,193	+		Echvi_1673	0.60	-0.4