Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1649

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
1,908,505	-		Echvi_1647	0.90	+0.9
1,908,513	-				+0.9
1,908,551	+				+0.2
1,908,552	-				+1.3
1,908,656	+				+0.0
1,908,686	-				+1.8
1,908,727	+				-0.9
1,908,728	-				-0.2
1,908,728	-				-1.2
1,908,728	-				-0.3
1,908,761	+				-0.8
1,908,761	+				-0.2
1,908,762	-				+0.8
1,908,762	-				+0.2
1,908,762	-				+1.0
1,908,764	-				-0.2
1,908,778	+				-0.7
1,908,779	-				-0.5
1,908,779	-				-1.4
1,908,817	-		Echvi_1648	0.16	-2.1
1,908,841	+		Echvi_1648	0.31	+0.9
1,908,889	+		Echvi_1648	0.62	-0.4
1,908,897	+		Echvi_1648	0.67	-0.5
1,908,897	+		Echvi_1648	0.67	-0.8
1,908,898	-		Echvi_1648	0.67	-0.7
1,908,898	-				+0.0
1,908,966	-				-1.0
1,909,010	-				-0.8
1,909,010	-				-0.8
1,909,022	-				-0.5
1,909,053	-				+0.2
1,909,064	-				-1.2
1,909,067	-				-0.7
1,909,072	-				-0.2
1,909,075	-				+0.7
1,909,189	+				+1.9
1,909,262	+				-0.0
1,909,498	+				+0.6
1,909,583	+				-1.5
1,909,583	+				-0.1
1,909,583	+				-1.4
1,909,584	-				-2.3
1,909,586	+				+0.1
1,909,586	+				+0.7
1,909,586	+				-0.5
1,909,587	-				+0.5
1,909,587	-				-0.8
1,909,667	+				-0.5
1,909,694	+				+1.6
1,909,694	+				+0.8
1,909,695	-				+0.8
1,909,722	-		Echvi_1649	0.10	+0.0
1,909,801	-		Echvi_1649	0.14	-0.8
1,909,833	-		Echvi_1649	0.15	-1.1
1,909,845	-		Echvi_1649	0.16	-2.7
1,909,853	+		Echvi_1649	0.16	+0.7
1,909,877	+		Echvi_1649	0.17	+0.1
1,909,877	+		Echvi_1649	0.17	-0.3
1,909,878	-		Echvi_1649	0.17	-0.1
1,909,934	+		Echvi_1649	0.20	-1.4
1,909,934	+		Echvi_1649	0.20	+1.5
1,909,937	+		Echvi_1649	0.20	+0.3
1,909,937	+		Echvi_1649	0.20	-0.5
1,909,937	+		Echvi_1649	0.20	-0.9
1,909,937	+		Echvi_1649	0.20	-0.4
1,909,938	-		Echvi_1649	0.20	-0.1
1,909,938	-		Echvi_1649	0.20	+0.4
1,909,938	-		Echvi_1649	0.20	-0.9
1,909,940	-		Echvi_1649	0.20	-2.5
1,909,949	+		Echvi_1649	0.20	+0.7
1,909,950	-		Echvi_1649	0.20	-2.3
1,909,950	-		Echvi_1649	0.20	-0.5
1,909,957	+		Echvi_1649	0.21	+0.1
1,909,957	+		Echvi_1649	0.21	-0.4
1,909,958	-		Echvi_1649	0.21	+0.2
1,909,962	+		Echvi_1649	0.21	+0.1
1,909,963	-		Echvi_1649	0.21	-0.8
1,909,963	-		Echvi_1649	0.21	-0.3
1,909,996	+		Echvi_1649	0.22	+0.1
1,909,996	+		Echvi_1649	0.22	+2.6
1,910,015	+		Echvi_1649	0.23	+0.4
1,910,016	-		Echvi_1649	0.23	-0.3
1,910,042	+		Echvi_1649	0.24	+2.6
1,910,043	-		Echvi_1649	0.24	+0.6
1,910,043	-		Echvi_1649	0.24	-0.4
1,910,043	-		Echvi_1649	0.24	-1.4
1,910,054	+		Echvi_1649	0.25	-0.5
1,910,054	+		Echvi_1649	0.25	+0.3
1,910,054	+		Echvi_1649	0.25	+1.0
1,910,055	-		Echvi_1649	0.25	-1.6
1,910,067	-		Echvi_1649	0.25	-0.5
1,910,111	+		Echvi_1649	0.27	-1.1
1,910,123	+		Echvi_1649	0.28	-0.8
1,910,126	-		Echvi_1649	0.28	-0.0
1,910,126	-		Echvi_1649	0.28	+1.0
1,910,154	+		Echvi_1649	0.29	-1.4
1,910,165	-		Echvi_1649	0.30	+0.6
1,910,229	+		Echvi_1649	0.33	-0.7
1,910,230	-		Echvi_1649	0.33	-1.2
1,910,237	+		Echvi_1649	0.33	-1.4
1,910,238	-		Echvi_1649	0.33	+1.2
1,910,258	+		Echvi_1649	0.34	+0.2
1,910,258	+		Echvi_1649	0.34	+0.5
1,910,258	+		Echvi_1649	0.34	-0.7
1,910,269	+		Echvi_1649	0.35	-0.5
1,910,269	+		Echvi_1649	0.35	-1.7
1,910,270	-		Echvi_1649	0.35	-1.6
1,910,270	-		Echvi_1649	0.35	-1.8
1,910,270	-		Echvi_1649	0.35	-0.4
1,910,280	+		Echvi_1649	0.35	+1.1
1,910,308	+		Echvi_1649	0.36	-0.1
1,910,324	+		Echvi_1649	0.37	-1.6
1,910,325	-		Echvi_1649	0.37	-0.0
1,910,325	-		Echvi_1649	0.37	+0.0
1,910,325	-		Echvi_1649	0.37	+1.0
1,910,325	-		Echvi_1649	0.37	-0.5
1,910,370	+		Echvi_1649	0.39	-1.8
1,910,372	+		Echvi_1649	0.39	-0.2
1,910,373	-		Echvi_1649	0.39	-1.8
1,910,393	+		Echvi_1649	0.40	+0.1
1,910,393	+		Echvi_1649	0.40	+1.0
1,910,393	+		Echvi_1649	0.40	-0.8
1,910,393	+		Echvi_1649	0.40	-0.8
1,910,413	+		Echvi_1649	0.41	-0.7
1,910,413	+		Echvi_1649	0.41	-0.7
1,910,413	+		Echvi_1649	0.41	+0.5
1,910,414	-		Echvi_1649	0.41	+0.1
1,910,414	-		Echvi_1649	0.41	+0.3
1,910,414	-		Echvi_1649	0.41	-1.4
1,910,417	+		Echvi_1649	0.41	-3.0
1,910,417	+		Echvi_1649	0.41	-1.3
1,910,543	+		Echvi_1649	0.47	-0.4
1,910,543	+		Echvi_1649	0.47	+0.2
1,910,544	-		Echvi_1649	0.47	-0.0
1,910,547	-		Echvi_1649	0.47	-0.6
1,910,576	-		Echvi_1649	0.48	+0.2
1,910,592	+		Echvi_1649	0.49	-1.1
1,910,636	-		Echvi_1649	0.51	-0.1
1,910,727	-		Echvi_1649	0.55	-1.1
1,910,727	-		Echvi_1649	0.55	-0.9
1,910,765	-		Echvi_1649	0.57	+0.3
1,910,772	-		Echvi_1649	0.57	-0.4
1,910,942	+		Echvi_1649	0.65	-0.5
1,910,967	-		Echvi_1649	0.66	+0.4
1,910,999	-		Echvi_1649	0.67	-0.7
1,911,052	-		Echvi_1649	0.70	-1.6
1,911,054	+		Echvi_1649	0.70	+0.3
1,911,055	-		Echvi_1649	0.70	+1.6
1,911,075	-		Echvi_1649	0.71	+0.7
1,911,075	-		Echvi_1649	0.71	-0.2
1,911,075	-		Echvi_1649	0.71	-0.3
1,911,076	+		Echvi_1649	0.71	-1.3
1,911,076	+		Echvi_1649	0.71	+1.5
1,911,076	+		Echvi_1649	0.71	-1.9
1,911,076	+		Echvi_1649	0.71	-0.4
1,911,076	+		Echvi_1649	0.71	-1.3
1,911,158	+		Echvi_1649	0.74	-2.2
1,911,290	+		Echvi_1649	0.80	-1.1
1,911,290	+		Echvi_1649	0.80	-1.1
1,911,290	+		Echvi_1649	0.80	-0.5
1,911,291	-		Echvi_1649	0.80	+0.9
1,911,291	-		Echvi_1649	0.80	+0.3
1,911,291	-		Echvi_1649	0.80	+0.5
1,911,291	-		Echvi_1649	0.80	+0.2
1,911,292	-		Echvi_1649	0.80	+0.8
1,911,302	-		Echvi_1649	0.81	+0.2
1,911,306	+		Echvi_1649	0.81	-0.3
1,911,307	-		Echvi_1649	0.81	+0.9
1,911,352	-		Echvi_1649	0.83	+1.3
1,911,458	+		Echvi_1649	0.88	+0.7
1,911,468	+		Echvi_1649	0.88	-1.0
1,911,478	+		Echvi_1649	0.89	+0.3
1,911,479	-		Echvi_1649	0.89	-1.2
1,911,550	-				+2.0
1,911,608	+				+0.2
1,911,608	+				-0.7
1,911,609	-				-0.9
1,911,609	-				-0.5
1,911,609	-				-0.1
1,911,609	-				-0.2
1,911,609	-				+0.0
1,911,609	-				+0.4
1,911,609	-				-0.7
1,911,610	+				-2.0
1,911,610	+				-1.0
1,911,611	-				-1.2
1,911,668	-				+0.3
1,911,668	-				-1.2
1,911,684	-				+1.4
1,911,702	+				-1.6
1,911,715	-				+0.6
1,911,721	+				+0.7
1,911,722	-				-1.1
1,911,722	-				+0.4
1,911,915	-				-0.5
1,911,965	+				-0.6
1,911,965	+				+0.7
1,912,040	+				-0.2
1,912,040	+				+0.2
1,912,430	-		Echvi_1650	0.21	-0.4
1,912,448	+		Echvi_1650	0.21	-0.9
1,912,448	+		Echvi_1650	0.21	-0.5
1,912,449	-		Echvi_1650	0.21	-2.2
1,912,449	-		Echvi_1650	0.21	-0.2
1,912,578	+		Echvi_1650	0.25	+0.4
1,912,579	-		Echvi_1650	0.25	+0.2
1,912,582	+		Echvi_1650	0.25	+0.1
1,912,645	+		Echvi_1650	0.27	+0.4
1,912,669	+		Echvi_1650	0.28	+0.6
1,912,670	-		Echvi_1650	0.28	-0.1
1,912,670	-		Echvi_1650	0.28	-2.4
1,912,670	-		Echvi_1650	0.28	-0.3
1,912,670	-		Echvi_1650	0.28	+0.3
1,912,672	-		Echvi_1650	0.28	+1.3
1,912,723	+		Echvi_1650	0.30	-2.9