Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0254

Experiment: M9 with sucrose and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0253 and EX28DRAFT_0254 are separated by 29 nucleotidesEX28DRAFT_0254 and EX28DRAFT_0255 are separated by 247 nucleotides EX28DRAFT_0253: EX28DRAFT_0253 - hypothetical protein, at 212,534 to 213,403 _0253 EX28DRAFT_0254: EX28DRAFT_0254 - hypothetical protein, at 213,433 to 213,651 _0254 EX28DRAFT_0255: EX28DRAFT_0255 - Domain of unknown function (DUF4123), at 213,899 to 214,714 _0255 Position (kb) 213 214Strain fitness (log2 ratio) -1 0 1at 212.469 kb on + strandat 212.634 kb on - strand, within EX28DRAFT_0253at 212.805 kb on - strand, within EX28DRAFT_0253at 212.821 kb on + strand, within EX28DRAFT_0253at 212.912 kb on + strand, within EX28DRAFT_0253at 212.958 kb on + strand, within EX28DRAFT_0253at 212.958 kb on + strand, within EX28DRAFT_0253at 212.959 kb on - strand, within EX28DRAFT_0253at 212.974 kb on + strand, within EX28DRAFT_0253at 212.993 kb on - strand, within EX28DRAFT_0253at 213.014 kb on - strand, within EX28DRAFT_0253at 213.024 kb on + strand, within EX28DRAFT_0253at 213.031 kb on + strand, within EX28DRAFT_0253at 213.033 kb on + strand, within EX28DRAFT_0253at 213.584 kb on + strand, within EX28DRAFT_0254at 214.145 kb on - strand, within EX28DRAFT_0255at 214.415 kb on - strand, within EX28DRAFT_0255

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM
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212,469 + -1.0
212,634 - EX28DRAFT_0253 0.11 -0.3
212,805 - EX28DRAFT_0253 0.31 +1.1
212,821 + EX28DRAFT_0253 0.33 +0.3
212,912 + EX28DRAFT_0253 0.43 -0.8
212,958 + EX28DRAFT_0253 0.49 -0.8
212,958 + EX28DRAFT_0253 0.49 +0.4
212,959 - EX28DRAFT_0253 0.49 -0.1
212,974 + EX28DRAFT_0253 0.51 +1.6
212,993 - EX28DRAFT_0253 0.53 -0.1
213,014 - EX28DRAFT_0253 0.55 -0.5
213,024 + EX28DRAFT_0253 0.56 +1.2
213,031 + EX28DRAFT_0253 0.57 +1.1
213,033 + EX28DRAFT_0253 0.57 -0.4
213,584 + EX28DRAFT_0254 0.69 -0.9
214,145 - EX28DRAFT_0255 0.30 +0.6
214,415 - EX28DRAFT_0255 0.63 -0.3

Or see this region's nucleotide sequence