Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03375

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,548,282	-				+2.0
3,548,298	+				+2.3
3,548,306	-				+0.4
3,548,356	-				-0.5
3,548,358	+				-0.0
3,548,366	-				-1.3
3,548,366	-				-0.4
3,548,461	+		CCNA_03374	0.13	+0.2
3,548,500	+		CCNA_03374	0.23	-0.2
3,548,583	-		CCNA_03374	0.43	-0.4
3,548,609	+		CCNA_03374	0.50	-0.3
3,548,616	-		CCNA_03374	0.51	-0.1
3,548,623	+		CCNA_03374	0.53	+0.3
3,548,631	-		CCNA_03374	0.55	-0.9
3,548,643	-		CCNA_03374	0.58	-0.3
3,548,643	-		CCNA_03374	0.58	-0.6
3,548,665	+		CCNA_03374	0.63	+0.7
3,548,665	+		CCNA_03374	0.63	+1.2
3,548,677	+		CCNA_03374	0.66	+0.0
3,548,679	-		CCNA_03374	0.67	-1.0
3,548,695	-		CCNA_03374	0.71	-0.8
3,548,698	+		CCNA_03374	0.71	-0.1
3,548,700	+		CCNA_03374	0.72	+0.4
3,548,700	+		CCNA_03374	0.72	+0.1
3,548,700	+		CCNA_03374	0.72	-0.1
3,548,700	+		CCNA_03374	0.72	-0.2
3,548,701	+		CCNA_03374	0.72	+0.3
3,548,703	-		CCNA_03374	0.73	-0.6
3,548,708	-		CCNA_03374	0.74	-0.8
3,548,708	-		CCNA_03374	0.74	-0.8
3,548,708	-		CCNA_03374	0.74	+0.9
3,548,709	-		CCNA_03374	0.74	-0.4
3,548,722	+		CCNA_03374	0.77	-0.2
3,548,746	+		CCNA_03374	0.83	+0.1
3,548,767	+		CCNA_03374	0.88	+0.2
3,548,779	+				-1.0
3,548,785	-				-0.3
3,548,787	-				-0.1
3,548,787	-				-1.0
3,548,803	+				+0.6
3,548,808	+				+0.8
3,548,813	+				+0.8
3,548,814	+				+0.6
3,548,814	+				+0.2
3,548,814	+				+0.9
3,548,814	+				-0.8
3,548,814	+				+0.9
3,548,814	+				+0.1
3,548,822	-				-1.1
3,548,822	-				+0.5
3,548,822	-				-0.0
3,548,878	+				+0.4
3,548,950	-		CCNA_03375	0.16	-1.4
3,548,962	-		CCNA_03375	0.18	+0.1
3,548,977	-		CCNA_03375	0.20	+0.3
3,549,018	+		CCNA_03375	0.24	-0.3
3,549,026	-		CCNA_03375	0.25	+0.0
3,549,032	+		CCNA_03375	0.26	+1.2
3,549,032	+		CCNA_03375	0.26	-0.6
3,549,032	+		CCNA_03375	0.26	+0.8
3,549,040	-		CCNA_03375	0.27	-0.2
3,549,040	-		CCNA_03375	0.27	-0.0
3,549,051	-		CCNA_03375	0.28	+0.0
3,549,053	+		CCNA_03375	0.28	+0.5
3,549,055	+		CCNA_03375	0.28	-0.4
3,549,063	-		CCNA_03375	0.29	+0.7
3,549,063	-		CCNA_03375	0.29	-0.3
3,549,063	-		CCNA_03375	0.29	+0.3
3,549,073	-		CCNA_03375	0.30	-1.5
3,549,078	-		CCNA_03375	0.31	+0.0
3,549,098	+		CCNA_03375	0.33	-0.4
3,549,098	+		CCNA_03375	0.33	-0.1
3,549,126	+		CCNA_03375	0.37	+0.4
3,549,142	+		CCNA_03375	0.38	-0.6
3,549,202	+		CCNA_03375	0.45	-0.1
3,549,271	+		CCNA_03375	0.53	-1.4
3,549,271	-		CCNA_03375	0.53	+0.0
3,549,279	+		CCNA_03375	0.54	-0.1
3,549,340	+		CCNA_03375	0.61	-2.2
3,549,347	+		CCNA_03375	0.62	-0.4
3,549,347	+		CCNA_03375	0.62	-0.1
3,549,348	+		CCNA_03375	0.62	-1.3
3,549,348	-		CCNA_03375	0.62	-0.1
3,549,348	-		CCNA_03375	0.62	-1.4
3,549,370	-		CCNA_03375	0.64	-0.4
3,549,382	+		CCNA_03375	0.66	+0.7
3,549,382	+		CCNA_03375	0.66	-0.9
3,549,390	-		CCNA_03375	0.67	-0.4
3,549,402	-		CCNA_03375	0.68	-0.2
3,549,414	-		CCNA_03375	0.69	-1.2
3,549,436	-		CCNA_03375	0.72	-0.7
3,549,448	+		CCNA_03375	0.73	+0.1
3,549,449	+		CCNA_03375	0.73	-1.4
3,549,476	+		CCNA_03375	0.76	-0.2
3,549,495	-		CCNA_03375	0.79	+0.7
3,549,515	-		CCNA_03375	0.81	-0.6
3,549,525	-		CCNA_03375	0.82	-1.6
3,549,540	+		CCNA_03375	0.84	-1.8
3,549,540	-		CCNA_03375	0.84	-1.1
3,549,548	-		CCNA_03375	0.85	+0.3
3,549,563	-		CCNA_03375	0.86	-0.9
3,549,589	+		CCNA_03375	0.89	-0.1
3,549,590	+		CCNA_03375	0.89	-0.8
3,549,624	+				-0.2
3,549,635	+				+0.2
3,549,643	-				-0.1
3,549,682	+				+0.3
3,549,689	-				+0.4
3,549,716	+				-1.6
3,549,726	+				-0.2
3,549,726	+				-1.2
3,549,726	+				-1.6
3,549,726	+				+0.4
3,549,729	-				+0.4
3,549,768	-		CCNA_03376	0.17	-0.0
3,549,768	-		CCNA_03376	0.17	-0.1
3,549,783	+		CCNA_03376	0.19	-0.6
3,549,855	+		CCNA_03376	0.33	-2.1
3,549,855	+		CCNA_03376	0.33	-2.2
3,549,855	+		CCNA_03376	0.33	-0.1
3,549,855	+		CCNA_03376	0.33	+1.0
3,549,855	+		CCNA_03376	0.33	+1.9
3,549,855	+		CCNA_03376	0.33	-0.4
3,549,855	+		CCNA_03376	0.33	+0.2
3,549,855	+		CCNA_03376	0.33	-1.0
3,549,855	+		CCNA_03376	0.33	-1.3
3,549,862	+		CCNA_03376	0.34	-0.1
3,549,863	-		CCNA_03376	0.34	-0.8
3,549,863	-		CCNA_03376	0.34	-0.3
3,549,863	-		CCNA_03376	0.34	+0.9
3,549,863	-		CCNA_03376	0.34	-0.6
3,549,863	-		CCNA_03376	0.34	+1.2
3,549,870	-		CCNA_03376	0.36	+0.2
3,549,870	-		CCNA_03376	0.36	+0.0
3,549,888	+		CCNA_03376	0.39	-1.0
3,549,933	+		CCNA_03376	0.47	+1.3
3,549,943	+		CCNA_03376	0.49	-0.4
3,549,943	+		CCNA_03376	0.49	-1.0
3,549,943	+		CCNA_03376	0.49	+0.4
3,549,943	+		CCNA_03376	0.49	-1.3
3,549,943	+		CCNA_03376	0.49	-1.1
3,549,943	+		CCNA_03376	0.49	-0.2
3,549,943	+		CCNA_03376	0.49	-0.7
3,549,951	-		CCNA_03376	0.51	+0.3
3,549,951	-		CCNA_03376	0.51	-0.3
3,549,951	-		CCNA_03376	0.51	-0.0
3,549,951	-		CCNA_03376	0.51	-0.1
3,549,951	-		CCNA_03376	0.51	+0.8
3,549,951	-		CCNA_03376	0.51	+0.2
3,549,951	-		CCNA_03376	0.51	-1.4
3,549,951	-		CCNA_03376	0.51	-0.6
3,549,951	-		CCNA_03376	0.51	+0.3
3,549,951	-		CCNA_03376	0.51	-0.8
3,549,951	-		CCNA_03376	0.51	+0.1
3,549,953	-		CCNA_03376	0.51	-0.8
3,549,961	-		CCNA_03376	0.52	+0.1
3,550,007	+		CCNA_03376	0.61	-0.3
3,550,015	-		CCNA_03376	0.62	+0.3
3,550,017	-		CCNA_03376	0.63	+0.2
3,550,046	-		CCNA_03376	0.68	+0.2
3,550,061	-		CCNA_03376	0.71	-0.5
3,550,070	+		CCNA_03376	0.73	-1.4
3,550,078	-		CCNA_03376	0.74	-0.3
3,550,103	+		CCNA_03376	0.79	-0.6
3,550,108	+		CCNA_03376	0.80	-1.4
3,550,108	+		CCNA_03376	0.80	+0.3
3,550,108	+		CCNA_03376	0.80	+0.1
3,550,108	+		CCNA_03376	0.80	-1.1
3,550,108	+		CCNA_03376	0.80	-0.3
3,550,116	-		CCNA_03376	0.81	+2.1
3,550,116	-		CCNA_03376	0.81	-0.2
3,550,116	-		CCNA_03376	0.81	-0.3
3,550,118	+		CCNA_03376	0.81	-0.2
3,550,118	+		CCNA_03376	0.81	-1.0
3,550,118	+		CCNA_03376	0.81	-1.1
3,550,118	+		CCNA_03376	0.81	+0.7
3,550,165	-				+0.6
3,550,166	-				-0.0
3,550,185	+				+0.4
3,550,220	-				-2.6
3,550,236	+				-0.5
3,550,342	-		CCNA_03377	0.28	-0.6
3,550,349	-		CCNA_03377	0.30	-0.3
3,550,371	+		CCNA_03377	0.34	-1.0
3,550,386	+		CCNA_03377	0.38	-1.4
3,550,396	-		CCNA_03377	0.40	+0.1
3,550,425	-		CCNA_03377	0.46	+0.4
3,550,425	-		CCNA_03377	0.46	-1.5
3,550,427	+		CCNA_03377	0.47	+0.8
3,550,427	+		CCNA_03377	0.47	+0.2
3,550,435	-		CCNA_03377	0.48	-0.9
3,550,451	+		CCNA_03377	0.52	-2.6
3,550,454	-		CCNA_03377	0.53	-0.3
3,550,459	-		CCNA_03377	0.54	-1.3
3,550,502	+		CCNA_03377	0.63	-0.1
3,550,510	-		CCNA_03377	0.65	-0.8
3,550,510	-		CCNA_03377	0.65	+0.4
3,550,511	-		CCNA_03377	0.65	-0.2
3,550,536	+		CCNA_03377	0.71	-0.1
3,550,536	+		CCNA_03377	0.71	-1.2
3,550,544	-		CCNA_03377	0.72	-0.1
3,550,544	-		CCNA_03377	0.72	+1.5
3,550,544	-		CCNA_03377	0.72	-0.1
3,550,550	+		CCNA_03377	0.74	-1.8
3,550,550	+		CCNA_03377	0.74	-0.5