Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03243

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
3,407,726	+		CCNA_03242	0.32	+1.3
3,407,748	-		CCNA_03242	0.33	+0.0
3,407,768	-		CCNA_03242	0.34	-0.3
3,407,830	-		CCNA_03242	0.39	-0.1
3,407,860	+		CCNA_03242	0.41	-0.2
3,407,926	+		CCNA_03242	0.45	-0.9
3,407,958	+		CCNA_03242	0.47	-0.6
3,407,958	+		CCNA_03242	0.47	+0.6
3,407,958	+		CCNA_03242	0.47	-0.9
3,407,966	-		CCNA_03242	0.48	-0.8
3,407,966	-		CCNA_03242	0.48	-0.2
3,407,966	-		CCNA_03242	0.48	+0.1
3,407,992	+		CCNA_03242	0.50	+0.1
3,408,001	-		CCNA_03242	0.50	+1.0
3,408,006	-		CCNA_03242	0.51	-1.9
3,408,018	+		CCNA_03242	0.52	-0.3
3,408,018	+		CCNA_03242	0.52	+0.3
3,408,029	+		CCNA_03242	0.52	-0.9
3,408,059	+		CCNA_03242	0.54	-0.8
3,408,061	+		CCNA_03242	0.55	-0.6
3,408,064	-		CCNA_03242	0.55	-0.2
3,408,069	-		CCNA_03242	0.55	+1.5
3,408,069	-		CCNA_03242	0.55	+1.0
3,408,157	-		CCNA_03242	0.61	+0.1
3,408,162	-		CCNA_03242	0.61	+0.4
3,408,162	-		CCNA_03242	0.61	-0.5
3,408,169	-		CCNA_03242	0.62	-0.9
3,408,195	+		CCNA_03242	0.64	+0.1
3,408,238	+		CCNA_03242	0.67	-1.4
3,408,338	+		CCNA_03242	0.74	-1.8
3,408,350	-		CCNA_03242	0.74	-0.2
3,408,353	+		CCNA_03242	0.75	-0.5
3,408,353	+		CCNA_03242	0.75	-0.4
3,408,400	-		CCNA_03242	0.78	+0.3
3,408,400	-		CCNA_03242	0.78	-1.2
3,408,407	+		CCNA_03242	0.78	-0.6
3,408,409	-		CCNA_03242	0.78	-0.7
3,408,433	-		CCNA_03242	0.80	+0.2
3,408,443	+		CCNA_03242	0.81	-0.2
3,408,443	+		CCNA_03242	0.81	-0.7
3,408,443	-		CCNA_03242	0.81	-0.4
3,408,451	-		CCNA_03242	0.81	+0.1
3,408,524	-		CCNA_03242	0.86	-0.2
3,408,524	-		CCNA_03242	0.86	-0.3
3,408,538	+		CCNA_03242	0.87	-0.0
3,408,538	+		CCNA_03242	0.87	-1.4
3,408,538	+		CCNA_03242	0.87	-0.7
3,408,546	-		CCNA_03242	0.88	-0.1
3,408,546	-		CCNA_03242	0.88	-0.9
3,408,563	+		CCNA_03242	0.89	-0.7
3,408,639	+				-0.8
3,408,647	-				-0.4
3,408,647	-				+0.3
3,408,672	-				+0.6
3,408,699	+				+0.8
3,408,699	+				-1.5
3,408,700	+				+0.6
3,408,700	+				+0.4
3,408,707	-				-0.1
3,408,708	-				+0.2
3,408,708	-				+1.3
3,408,718	+				-1.7
3,408,726	-				-0.2
3,408,726	-				+0.2
3,408,762	-				-0.2
3,408,762	-				-0.4
3,408,770	-				-0.1
3,408,778	-				-0.2
3,408,789	+				-1.1
3,408,797	-				+0.2
3,408,811	-				-0.8
3,408,821	+				-0.1
3,408,829	-				-0.1
3,408,886	-		CCNA_03243	0.11	-0.4
3,408,888	+		CCNA_03243	0.11	-0.8
3,408,888	+		CCNA_03243	0.11	-1.8
3,408,888	+		CCNA_03243	0.11	-0.3
3,408,896	-		CCNA_03243	0.12	+0.3
3,408,903	-		CCNA_03243	0.12	+1.2
3,408,923	-		CCNA_03243	0.14	-0.4
3,408,930	-		CCNA_03243	0.14	-0.9
3,408,930	-		CCNA_03243	0.14	-0.6
3,408,933	+		CCNA_03243	0.14	-0.3
3,408,933	+		CCNA_03243	0.14	-1.6
3,408,933	+		CCNA_03243	0.14	-0.3
3,408,941	-		CCNA_03243	0.15	+0.1
3,408,977	-		CCNA_03243	0.17	+0.1
3,409,013	+		CCNA_03243	0.20	-0.2
3,409,029	+		CCNA_03243	0.21	+0.4
3,409,029	+		CCNA_03243	0.21	-1.2
3,409,029	+		CCNA_03243	0.21	+0.2
3,409,029	+		CCNA_03243	0.21	-2.0
3,409,037	-		CCNA_03243	0.21	-0.2
3,409,058	-		CCNA_03243	0.23	+0.6
3,409,078	+		CCNA_03243	0.24	-1.0
3,409,097	+		CCNA_03243	0.25	+0.2
3,409,097	+		CCNA_03243	0.25	-0.2
3,409,097	+		CCNA_03243	0.25	-1.8
3,409,105	-		CCNA_03243	0.26	+1.3
3,409,105	-		CCNA_03243	0.26	-0.6
3,409,105	-		CCNA_03243	0.26	+1.7
3,409,105	-		CCNA_03243	0.26	-0.2
3,409,105	-		CCNA_03243	0.26	+0.2
3,409,130	+		CCNA_03243	0.27	-1.5
3,409,139	-		CCNA_03243	0.28	+0.2
3,409,145	+		CCNA_03243	0.28	-0.2
3,409,170	-		CCNA_03243	0.30	-0.5
3,409,170	-		CCNA_03243	0.30	-0.1
3,409,189	+		CCNA_03243	0.31	+0.3
3,409,192	-		CCNA_03243	0.31	+2.8
3,409,194	+		CCNA_03243	0.32	-0.9
3,409,197	-		CCNA_03243	0.32	+0.8
3,409,197	-		CCNA_03243	0.32	-0.4
3,409,197	-		CCNA_03243	0.32	+0.3
3,409,197	-		CCNA_03243	0.32	+0.9
3,409,199	+		CCNA_03243	0.32	+0.4
3,409,202	-		CCNA_03243	0.32	+0.8
3,409,227	+		CCNA_03243	0.34	-0.9
3,409,242	-		CCNA_03243	0.35	+0.4
3,409,243	+		CCNA_03243	0.35	+0.1
3,409,257	+		CCNA_03243	0.36	-0.1
3,409,309	+		CCNA_03243	0.39	-0.9
3,409,333	-		CCNA_03243	0.41	+0.1
3,409,333	-		CCNA_03243	0.41	-0.5
3,409,365	+		CCNA_03243	0.43	+0.4
3,409,365	+		CCNA_03243	0.43	-0.8
3,409,416	+		CCNA_03243	0.46	-0.3
3,409,418	-		CCNA_03243	0.47	+1.9
3,409,423	-		CCNA_03243	0.47	-0.7
3,409,429	+		CCNA_03243	0.47	-1.1
3,409,471	-		CCNA_03243	0.50	-0.1
3,409,491	-		CCNA_03243	0.51	+0.5
3,409,548	-		CCNA_03243	0.55	+0.3
3,409,548	-		CCNA_03243	0.55	+0.8
3,409,550	+		CCNA_03243	0.55	+1.1
3,409,611	+		CCNA_03243	0.59	+0.9
3,409,642	-		CCNA_03243	0.61	-0.5
3,409,676	-		CCNA_03243	0.64	-0.0
3,409,684	+		CCNA_03243	0.64	+0.7
3,409,684	+		CCNA_03243	0.64	-0.6
3,409,692	-		CCNA_03243	0.65	+0.1
3,409,696	+		CCNA_03243	0.65	+0.9
3,409,714	-		CCNA_03243	0.66	+0.4
3,409,729	+		CCNA_03243	0.67	-1.5
3,409,735	+		CCNA_03243	0.68	-0.8
3,409,757	+		CCNA_03243	0.69	-0.9
3,409,757	+		CCNA_03243	0.69	-0.2
3,409,757	-		CCNA_03243	0.69	+0.5
3,409,785	+		CCNA_03243	0.71	-0.4
3,409,786	+		CCNA_03243	0.71	-1.2
3,409,798	+		CCNA_03243	0.72	-0.6
3,409,806	-		CCNA_03243	0.72	-0.3
3,409,809	+		CCNA_03243	0.73	-0.3
3,409,814	+		CCNA_03243	0.73	-0.3
3,409,836	+		CCNA_03243	0.74	-0.6
3,409,844	-		CCNA_03243	0.75	+0.4
3,409,873	+		CCNA_03243	0.77	-0.4
3,409,881	-		CCNA_03243	0.77	+0.2
3,409,887	+		CCNA_03243	0.78	-1.7
3,409,900	-		CCNA_03243	0.79	+0.8
3,409,908	-		CCNA_03243	0.79	+0.2
3,409,961	-		CCNA_03243	0.83	-1.2
3,409,961	-		CCNA_03243	0.83	-1.4
3,409,963	+		CCNA_03243	0.83	-0.8
3,409,963	+		CCNA_03243	0.83	-2.1
3,409,971	-		CCNA_03243	0.83	+0.4
3,409,987	-		CCNA_03243	0.84	-0.4
3,409,987	-		CCNA_03243	0.84	-0.4
3,410,059	+		CCNA_03243	0.89	+0.2
3,410,070	+				-1.1
3,410,078	-				+0.4
3,410,153	-				-0.1
3,410,158	-				-0.2
3,410,204	+				+0.3
3,410,214	+				-0.2
3,410,222	-				+0.2
3,410,228	+				-2.1
3,410,271	+				-0.2
3,410,275	-				-0.2
3,410,296	+				-1.0
3,410,366	+		CCNA_03244	0.14	+1.2
3,410,366	+		CCNA_03244	0.14	+0.4
3,410,366	+		CCNA_03244	0.14	-0.0
3,410,517	-		CCNA_03244	0.36	+0.0
3,410,517	-		CCNA_03244	0.36	+0.5
3,410,600	+		CCNA_03244	0.48	+0.2
3,410,600	+		CCNA_03244	0.48	-0.1
3,410,655	+		CCNA_03244	0.57	-0.1
3,410,655	+		CCNA_03244	0.57	-0.1
3,410,655	+		CCNA_03244	0.57	-1.3
3,410,655	+		CCNA_03244	0.57	-0.4
3,410,666	+		CCNA_03244	0.58	+1.6
3,410,666	+		CCNA_03244	0.58	-0.9
3,410,666	+		CCNA_03244	0.58	-0.1
3,410,674	-		CCNA_03244	0.59	+0.1
3,410,674	-		CCNA_03244	0.59	-0.3
3,410,674	-		CCNA_03244	0.59	+0.1
3,410,674	-		CCNA_03244	0.59	+0.0
3,410,674	-		CCNA_03244	0.59	+0.3
3,410,674	-		CCNA_03244	0.59	-0.2
3,410,674	-		CCNA_03244	0.59	-0.3
3,410,699	-		CCNA_03244	0.63	-0.4
3,410,708	-		CCNA_03244	0.64	+0.3
3,410,745	-		CCNA_03244	0.70	+0.3
3,410,759	+		CCNA_03244	0.72	-0.7
3,410,795	+		CCNA_03244	0.77	+0.3
3,410,803	-		CCNA_03244	0.79	+0.3
3,410,843	+		CCNA_03244	0.85	-0.3
3,410,843	-		CCNA_03244	0.85	-0.2
3,410,848	+		CCNA_03244	0.85	-0.2
3,410,856	-		CCNA_03244	0.86	+0.1
3,410,877	-		CCNA_03244	0.90	-1.5
3,410,888	+				+0.2
3,410,896	-				-0.3
3,410,910	-				+1.7
3,410,912	+				-1.5
3,410,920	-				-0.3
3,410,938	+				-0.3
3,410,938	+				+0.1
3,411,014	+				-1.0
3,411,022	-				-0.6
3,411,028	-				+0.2
3,411,086	+				-0.0
3,411,141	+				-0.7
3,411,141	+				-0.1
3,411,141	+				-0.3
3,411,141	+				+0.2
3,411,141	+				-0.8
3,411,141	+				-0.1
3,411,141	+				-0.6
3,411,141	+				+0.9
3,411,141	+				+0.4
3,411,149	-		CCNA_03245	0.10	-0.6
3,411,149	-		CCNA_03245	0.10	+0.6
3,411,149	-		CCNA_03245	0.10	-0.3
3,411,149	-		CCNA_03245	0.10	-1.0
3,411,149	-		CCNA_03245	0.10	-1.3
3,411,168	+		CCNA_03245	0.12	-0.3
3,411,174	+		CCNA_03245	0.12	-0.5
3,411,182	-		CCNA_03245	0.13	-0.0
3,411,182	-		CCNA_03245	0.13	+0.6
3,411,182	-		CCNA_03245	0.13	+0.6
3,411,184	-		CCNA_03245	0.13	+0.2