Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01584

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,698,800	-		CCNA_01583	0.27	+0.7
1,699,062	+		CCNA_01583	0.52	-0.6
1,699,476	+				+0.9
1,699,484	-				-1.6
1,699,607	-				+1.2
1,699,671	+				+0.8
1,699,818	+				+0.5
1,699,874	-				-0.5
1,699,891	+				+0.3
1,699,959	-		CCNA_01584	0.11	-0.0
1,699,978	+		CCNA_01584	0.12	-0.6
1,700,013	+		CCNA_01584	0.14	+1.0
1,700,013	+		CCNA_01584	0.14	-0.2
1,700,016	-		CCNA_01584	0.14	+0.4
1,700,021	-		CCNA_01584	0.14	+1.7
1,700,068	+		CCNA_01584	0.16	-0.1
1,700,136	+		CCNA_01584	0.19	-0.1
1,700,145	-		CCNA_01584	0.19	-0.1
1,700,232	+		CCNA_01584	0.23	+0.4
1,700,232	+		CCNA_01584	0.23	+1.1
1,700,237	+		CCNA_01584	0.23	-1.0
1,700,239	+		CCNA_01584	0.23	+0.2
1,700,245	-		CCNA_01584	0.23	+0.4
1,700,250	-		CCNA_01584	0.24	+1.5
1,700,250	-		CCNA_01584	0.24	+0.6
1,700,261	+		CCNA_01584	0.24	-0.5
1,700,261	+		CCNA_01584	0.24	+0.1
1,700,273	-		CCNA_01584	0.25	+0.4
1,700,291	+		CCNA_01584	0.25	+0.5
1,700,295	-		CCNA_01584	0.26	-0.2
1,700,302	+		CCNA_01584	0.26	-0.7
1,700,367	+		CCNA_01584	0.29	+0.4
1,700,403	+		CCNA_01584	0.30	-1.2
1,700,403	+		CCNA_01584	0.30	+0.9
1,700,411	-		CCNA_01584	0.30	+0.7
1,700,439	+		CCNA_01584	0.32	-0.0
1,700,551	+		CCNA_01584	0.36	-0.6
1,700,553	+		CCNA_01584	0.36	-0.5
1,700,565	-		CCNA_01584	0.37	+1.0
1,700,608	+		CCNA_01584	0.39	+1.9
1,700,608	+		CCNA_01584	0.39	-1.0
1,700,608	+		CCNA_01584	0.39	+2.5
1,700,616	-		CCNA_01584	0.39	+0.5
1,700,692	+		CCNA_01584	0.42	-0.8
1,700,722	+		CCNA_01584	0.43	-0.9
1,700,730	-		CCNA_01584	0.44	+0.1
1,700,772	+		CCNA_01584	0.46	-0.2
1,700,777	+		CCNA_01584	0.46	-0.8
1,700,797	+		CCNA_01584	0.47	-0.7
1,700,883	+		CCNA_01584	0.50	+0.5
1,700,892	+		CCNA_01584	0.51	-0.0
1,700,900	-		CCNA_01584	0.51	+0.2
1,700,900	-		CCNA_01584	0.51	-0.3
1,700,937	+		CCNA_01584	0.52	+0.2
1,700,937	-		CCNA_01584	0.52	+0.3
1,700,945	-		CCNA_01584	0.53	+0.3
1,700,946	-		CCNA_01584	0.53	+0.6
1,700,959	+		CCNA_01584	0.53	+1.3
1,700,959	+		CCNA_01584	0.53	-0.9
1,700,967	-		CCNA_01584	0.54	-0.5
1,700,967	-		CCNA_01584	0.54	-0.1
1,700,967	-		CCNA_01584	0.54	+0.7
1,700,967	-		CCNA_01584	0.54	-0.1
1,701,003	-		CCNA_01584	0.55	-0.1
1,701,047	+		CCNA_01584	0.57	+0.4
1,701,066	+		CCNA_01584	0.58	-1.5
1,701,077	+		CCNA_01584	0.58	-0.6
1,701,087	+		CCNA_01584	0.59	+0.1
1,701,153	-		CCNA_01584	0.62	+2.1
1,701,208	-		CCNA_01584	0.64	+0.2
1,701,243	-		CCNA_01584	0.65	+0.4
1,701,376	+		CCNA_01584	0.71	+0.2
1,701,462	+		CCNA_01584	0.74	-0.4
1,701,475	+		CCNA_01584	0.75	+0.1
1,701,475	+		CCNA_01584	0.75	-0.4
1,701,475	+		CCNA_01584	0.75	+0.3
1,701,515	-		CCNA_01584	0.77	+0.8
1,701,599	+		CCNA_01584	0.80	+0.0
1,701,599	+		CCNA_01584	0.80	+0.3
1,701,620	+		CCNA_01584	0.81	+0.5
1,701,628	-		CCNA_01584	0.81	-0.7
1,701,649	+		CCNA_01584	0.82	+0.4
1,701,657	-		CCNA_01584	0.83	-0.3
1,701,674	-		CCNA_01584	0.83	+0.7
1,701,697	+		CCNA_01584	0.84	+0.2
1,701,769	+		CCNA_01584	0.87	+0.3
1,701,786	-		CCNA_01584	0.88	+0.3
1,701,804	-		CCNA_01584	0.89	+0.9
1,701,816	-		CCNA_01584	0.89	-0.5
1,701,836	-				+0.9
1,701,860	-				+2.5
1,701,877	-				-1.2
1,701,998	+				-0.6
1,702,038	+				-1.0
1,702,046	-				+0.5
1,702,061	-				+0.3
1,702,066	+				-1.3
1,702,066	+				+0.2
1,702,066	+				+0.5
1,702,066	+				+0.8
1,702,066	+				-0.3
1,702,074	-				+0.8
1,702,074	-				+0.3
1,702,209	-				-1.7
1,702,218	+				+0.1
1,702,234	-				+0.6
1,702,325	+				+0.1
1,702,333	-				+0.5
1,702,403	+				-0.2
1,702,407	+				+0.1
1,702,408	+				-0.3
1,702,415	-				-0.4
1,702,429	+				+0.1
1,702,429	-				+0.1
1,702,454	+				-1.6
1,702,493	+				+0.4
1,702,525	-				+0.3
1,702,525	-				+1.3
1,702,546	+				+0.3
1,702,637	-		CCNA_01585	0.13	+0.1
1,702,638	+		CCNA_01585	0.14	-1.5
1,702,644	+		CCNA_01585	0.14	-0.9
1,702,646	-		CCNA_01585	0.14	-0.5
1,702,646	-		CCNA_01585	0.14	-2.0
1,702,667	-		CCNA_01585	0.15	-0.1
1,702,739	-		CCNA_01585	0.18	+0.7
1,702,739	-		CCNA_01585	0.18	-0.2
1,702,756	+		CCNA_01585	0.19	-0.3
1,702,756	+		CCNA_01585	0.19	+0.6
1,702,772	+		CCNA_01585	0.20	-1.3
1,702,793	-		CCNA_01585	0.21	-0.0
1,702,798	-		CCNA_01585	0.21	-2.2
1,702,809	+		CCNA_01585	0.22	-1.3
1,702,824	-		CCNA_01585	0.22	-1.0
1,702,844	-		CCNA_01585	0.23	-1.0
1,702,857	-		CCNA_01585	0.24	-1.5
1,703,000	+		CCNA_01585	0.31	-1.3
1,703,046	+		CCNA_01585	0.33	-0.4
1,703,046	+		CCNA_01585	0.33	-0.3
1,703,046	+		CCNA_01585	0.33	-1.8
1,703,046	+		CCNA_01585	0.33	-2.6
1,703,046	+		CCNA_01585	0.33	+0.3
1,703,046	+		CCNA_01585	0.33	+0.2
1,703,046	+		CCNA_01585	0.33	+1.0
1,703,046	+		CCNA_01585	0.33	-1.6
1,703,046	+		CCNA_01585	0.33	-0.6
1,703,051	+		CCNA_01585	0.33	-0.2
1,703,054	-		CCNA_01585	0.34	+0.4
1,703,054	-		CCNA_01585	0.34	+0.9
1,703,054	-		CCNA_01585	0.34	-0.4
1,703,054	-		CCNA_01585	0.34	-1.2
1,703,054	-		CCNA_01585	0.34	-0.1
1,703,054	-		CCNA_01585	0.34	+0.6
1,703,054	-		CCNA_01585	0.34	-2.4
1,703,054	-		CCNA_01585	0.34	-0.6