Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01273

Experiment: PYE with CHIR-090 40 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 40 ug/mL
1,398,463	+				+0.2
1,398,506	+				+0.1
1,398,506	+				+0.7
1,398,523	+				+1.4
1,398,559	+		CCNA_01271	0.17	+0.1
1,398,561	-		CCNA_01271	0.17	-0.5
1,398,571	-		CCNA_01271	0.19	-1.1
1,398,672	-		CCNA_01271	0.38	-0.2
1,398,707	+		CCNA_01271	0.44	-0.9
1,398,707	+		CCNA_01271	0.44	+0.6
1,398,707	+		CCNA_01271	0.44	-0.3
1,398,707	+		CCNA_01271	0.44	-0.5
1,398,707	+		CCNA_01271	0.44	+0.4
1,398,707	+		CCNA_01271	0.44	+0.5
1,398,707	+		CCNA_01271	0.44	+0.6
1,398,707	+		CCNA_01271	0.44	-0.4
1,398,707	+		CCNA_01271	0.44	-0.3
1,398,707	+		CCNA_01271	0.44	-0.2
1,398,715	-		CCNA_01271	0.46	-0.8
1,398,715	-		CCNA_01271	0.46	+0.3
1,398,715	-		CCNA_01271	0.46	-1.6
1,398,715	-		CCNA_01271	0.46	-1.1
1,398,715	-		CCNA_01271	0.46	+2.4
1,398,715	-		CCNA_01271	0.46	-0.2
1,398,715	-		CCNA_01271	0.46	-0.7
1,398,715	-		CCNA_01271	0.46	-0.3
1,398,715	-		CCNA_01271	0.46	-0.2
1,398,715	-		CCNA_01271	0.46	-0.5
1,398,715	-		CCNA_01271	0.46	-1.5
1,398,761	+		CCNA_01271	0.54	+0.9
1,398,874	+		CCNA_01271	0.76	+2.2
1,398,874	+		CCNA_01271	0.76	-0.4
1,398,880	-		CCNA_01271	0.77	-0.6
1,398,896	+		CCNA_01271	0.80	-1.3
1,398,904	+		CCNA_01271	0.81	+0.1
1,398,942	+		CCNA_01271	0.88	-0.5
1,399,005	-				-0.6
1,399,005	-				+0.1
1,399,039	-				+0.6
1,399,050	-				+0.0
1,399,069	+		CCNA_01272	0.13	-0.4
1,399,086	-		CCNA_01272	0.17	-0.1
1,399,100	-		CCNA_01272	0.21	-0.1
1,399,128	-		CCNA_01272	0.27	-0.9
1,399,171	-		CCNA_01272	0.37	+0.2
1,399,218	+		CCNA_01272	0.48	-0.3
1,399,230	+		CCNA_01272	0.51	-1.9
1,399,238	-		CCNA_01272	0.53	-1.1
1,399,238	-		CCNA_01272	0.53	-0.5
1,399,238	-		CCNA_01272	0.53	+1.7
1,399,238	-		CCNA_01272	0.53	+0.2
1,399,238	-		CCNA_01272	0.53	+0.2
1,399,238	-		CCNA_01272	0.53	+0.2
1,399,243	-		CCNA_01272	0.54	+0.5
1,399,254	-		CCNA_01272	0.56	+0.3
1,399,279	+		CCNA_01272	0.62	+0.2
1,399,279	+		CCNA_01272	0.62	+0.1
1,399,315	-		CCNA_01272	0.70	+0.2
1,399,319	+		CCNA_01272	0.71	+0.6
1,399,420	-				+0.1
1,399,448	+				+0.3
1,399,469	+				-0.1
1,399,469	+				-0.7
1,399,477	-				+0.6
1,399,493	+				+0.5
1,399,504	-		CCNA_01273	0.12	-0.6
1,399,530	-		CCNA_01273	0.18	+0.1
1,399,549	-		CCNA_01273	0.22	+1.5
1,399,567	+		CCNA_01273	0.26	-0.2
1,399,593	+		CCNA_01273	0.32	-0.5
1,399,596	-		CCNA_01273	0.32	-1.1
1,399,657	-		CCNA_01273	0.45	+0.3
1,399,695	+		CCNA_01273	0.54	+0.3
1,399,705	+		CCNA_01273	0.56	-0.3
1,399,713	-		CCNA_01273	0.58	+0.6
1,399,713	-		CCNA_01273	0.58	-0.4
1,399,760	+		CCNA_01273	0.68	-0.8
1,399,807	+		CCNA_01273	0.78	+1.1
1,399,830	-		CCNA_01273	0.83	+0.0
1,399,855	-		CCNA_01273	0.88	+0.2
1,399,871	+				+0.8
1,399,896	-				-0.0
1,399,922	+				+0.0
1,399,925	-				+0.6
1,400,007	+				-1.5
1,400,015	-				-0.3
1,400,042	+				-1.3
1,400,057	+				-0.3
1,400,066	-				-0.4
1,400,074	+				+0.3
1,400,075	+				-0.3
1,400,085	+				-0.7
1,400,090	+				-0.7
1,400,093	-				+1.0
1,400,309	-		CCNA_01274	0.15	+0.5
1,400,343	-		CCNA_01274	0.17	-0.1
1,400,349	+		CCNA_01274	0.17	-0.6
1,400,361	+		CCNA_01274	0.18	+0.5
1,400,384	-		CCNA_01274	0.20	+0.2
1,400,389	-		CCNA_01274	0.20	-0.5
1,400,392	+		CCNA_01274	0.20	-1.6
1,400,397	+		CCNA_01274	0.20	+0.5
1,400,399	-		CCNA_01274	0.21	+0.3
1,400,399	-		CCNA_01274	0.21	-0.1
1,400,399	-		CCNA_01274	0.21	+1.0
1,400,404	+		CCNA_01274	0.21	+0.8
1,400,417	-		CCNA_01274	0.22	-1.3
1,400,444	+		CCNA_01274	0.24	-0.9
1,400,490	-		CCNA_01274	0.27	+2.1
1,400,496	-		CCNA_01274	0.27	+0.2
1,400,545	+		CCNA_01274	0.30	+0.6
1,400,577	-		CCNA_01274	0.32	+0.4
1,400,613	+		CCNA_01274	0.35	-0.5
1,400,671	+		CCNA_01274	0.38	-2.4
1,400,679	-		CCNA_01274	0.39	-0.5
1,400,702	-		CCNA_01274	0.40	+0.3
1,400,720	-		CCNA_01274	0.42	-0.0
1,400,722	+		CCNA_01274	0.42	-0.0
1,400,822	-		CCNA_01274	0.48	+0.4
1,400,856	+		CCNA_01274	0.51	-0.4
1,400,899	+		CCNA_01274	0.53	+0.1
1,400,899	+		CCNA_01274	0.53	-0.2